ID   DQ438949; SV 1; linear; genomic RNA; STD; VRL; 1815 BP.
XX
AC   DQ438949;
XX
DT   29-MAR-2006 (Rel. 87, Created)
DT   06-SEP-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus isolate KhzQ86 polyprotein gene, partial cds; and 3'
DE   UTR.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1815
RA   Masumi M., Zare A., Izadpanah K.;
RT   "Nucleotide sequencing of the 3'-region of two Iranian isolates of
RT   Sugarcane mosaic virus (SCMV) genome and revision of SCMV strain grouping
RT   in the world on the basis of analysis CP-UTR region";
RL   Iran. J. Plant Pathol. 0:0(2006).
XX
RN   [2]
RP   1-1815
RA   Masumi M., Zare A., Izadpanah K.;
RT   ;
RL   Submitted (08-MAR-2006) to the INSDC.
RL   Plant Virology Research Center, Shiraz University, Shiraz, Fars, Iran
XX
DR   MD5; 86417fe149a86ccb93f6ae77c7b78c1d.
DR   EuropePMC; PMC5461048; 28592948.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1815
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="sugarcane"
FT                   /strain="A"
FT                   /isolate="KhzQ86"
FT                   /serotype="A"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..1584
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q1W4C8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1W4C8"
FT                   /protein_id="ABD93921.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAFNYAMLSSGIQDNEIDNCCRMFANG
FT                   DDLLLAVHPDYEHILDGFQDHFGNLGLNFEFTSRTRDKSELWFMSTRGIKCEGIYIPKL
FT                   EKERIVAILEWDRSNLPEHRLEAICAAMVEAWGYSDLVYEIRKFYAWLLEMQPFANLAK
FT                   EGLAPYIAETALRNLYLGSGIKEEEIEKYFKQFAKDLPGYLEDYNEEVFHQAGTVDAGA
FT                   QGGDGKAGTQPPATGAAAQGGAQPPATGAAAQPPATQGSQPPTGGATGGGGAQTGAGET
FT                   GSVTGGQKDKDVDAGTTGKITVPKLKAMSKKMRLPKAKGKDVLHLDFLLTYKPQQQDIS
FT                   NTRATREEFDRWYEAIKKEYEIDDTQMTVVMSGLMVWCIENGCSPNINGNWTMMDGDEQ
FT                   RVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDYSLARYA
FT                   FDFYEMNSRTPARAKEAHMQMKAAAVRGSNTRLFGLDGNVGETQENTERHTAGDVSRNM
FT                   HSLLGVQQHH"
FT   mat_peptide     1..642
FT                   /product="NIb"
FT   mat_peptide     643..1581
FT                   /product="CP"
FT   3'UTR           1585..1815
XX
SQ   Sequence 1815 BP; 576 A; 377 C; 450 G; 412 T; 0 other;
     ggaaacaaca gtggtcagcc atcaactgta gttgacaaca cgctaatggt catcttagca        60
     ttcaattatg caatgttgtc aagtggaata caagacaatg aaatcgataa ctgttgcagg       120
     atgtttgcta atggagatga tctactgttg gcagtacatc ccgattatga gcatatactg       180
     gacggatttc aagatcactt cggaaatctc ggattaaatt ttgagtttac atcacgaaca       240
     cgagataaat ccgaattgtg gttcatgtct acaagaggaa tcaaatgtga aggaatctac       300
     atacctaaac ttgagaaaga aagaatagtc gcaatactcg aatgggatcg atcgaatcta       360
     cctgagcata gattggaagc catttgtgca gctatggttg aagcatgggg ctactcagat       420
     cttgtttacg aaattcggaa attttatgcg tggcttctgg aaatgcaacc atttgcaaat       480
     ctagccaaag agggtttagc tccatatatc gcagaaacag cgcttcgtaa cttgtatcta       540
     ggttcaggca tcaaggaaga ggaaatcgag aaatacttca agcagtttgc aaaagacctc       600
     cctgggtatt tagaggatta caacgaagaa gttttccacc aagctggaac agtcgatgca       660
     ggcgcgcaag gaggagatgg gaaagccgga actcagccgc cagccactgg agcagcagct       720
     caaggaggag ctcaaccacc agcaactgga gcagccgcgc aaccacccgc gactcaaggt       780
     tcacaaccgc ccacaggagg agccactggt ggaggtggtg cacaaacagg agctggcgaa       840
     actggttcag ttacaggagg tcaaaaagac aaggatgtag atgctggtac gacaggcaaa       900
     atcacagtgc caaaacttaa agccatgtcg aagaagatgc gcttgccaaa agcaaaagga       960
     aaagatgttt tgcatctgga ctttctgtta acatacaaac cgcaacaaca agacatatca      1020
     aacacaagag caaccagaga ggagtttgat agatggtatg aagccataaa gaaggaatac      1080
     gaaatagatg acacacaaat gacagttgtc atgagtggtc taatggtatg gtgcattgag      1140
     aatggttgct cacctaacat aaacggaaat tggacaatga tggatggaga tgaacaaaga      1200
     gtcttcccac taaagccagt cattgaaaac gcatctccaa cattccgaca aataatgcat      1260
     catttcagtg atgcagctga agcatatatc gagtatagaa actctacaga gcgatacatg      1320
     ccacgatatg gacttcagcg gaatctcacc gactatagct tagcgcggta tgccttcgac      1380
     ttctacgaaa tgaattcaag gacaccagct agagctaagg aagcccacat gcagatgaag      1440
     gccgcagcag ttcgtggttc aaacacacga ttgttcggtc tggacggaaa tgtcggcgag      1500
     actcaggaga atacagagag acacacagct ggcgatgtca gtcgcaacat gcactctctg      1560
     ttgggagtgc agcagcacca ctagtctcct ggaaaccctg tttgcagtac ctatagtatg      1620
     tactaataat gtatgtcagt gaggttttac ctcgttttta ctatattacg tatgtactta      1680
     aagcgtgaac cagtctgcag gacacagggt tggacccagt gtcttctggt gtagcgtgta      1740
     ctagcgtcga gccacgtgac ggacagcact gggtgtggct ttgccattgg tgctgcgagt      1800
     ctcttggtga gagac                                                       1815
//