ID   DQ436918; SV 2; linear; genomic RNA; STD; VRL; 1815 BP.
XX
AC   DQ436918;
XX
DT   04-APR-2006 (Rel. 87, Created)
DT   28-NOV-2007 (Rel. 93, Last updated, Version 5)
XX
DE   Iris mild mosaic virus isolate DC4a polyprotein gene, partial cds.
XX
KW   .
XX
OS   Iris mild mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1815
RA   Wei T., Pearson M.N., Cohen D.;
RT   "First report of Iris mild mosaic virus from Iris wedgewood in New
RT   Zealand";
RL   Unpublished.
XX
RN   [2]
RP   1-1815
RA   Wei T., Pearson M.N., Cohen D.;
RT   ;
RL   Submitted (05-MAR-2006) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, 3a Symonds
RL   Street, Auckland City, Auckland 92019, New Zealand
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1815
RA   Wei T., Pearson M.N., Cohen D.;
RT   ;
RL   Submitted (26-NOV-2007) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, 3a Symonds
RL   Street, Auckland City, Auckland 92019, New Zealand
XX
DR   MD5; 9d5b2d5496dd03d97930ef37e805e519.
XX
CC   On Nov 26, 2007 this sequence version replaced gi:90820088.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1815
FT                   /organism="Iris mild mosaic virus"
FT                   /host="Iris x hollandica cv. Wedgewood"
FT                   /isolate="DC4a"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /isolation_source="tissue lysate"
FT                   /db_xref="taxon:206392"
FT   CDS             <1..1473
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="encodes NIb and CP"
FT                   /db_xref="GOA:Q1W5T0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1W5T0"
FT                   /protein_id="ABD98799.2"
FT                   /translation="NNSGQPSTVVDNTLVVILAMQYALRRLGLDATEQKANCVYFANGD
FT                   DLVVAVSPSYTHILDNLQKYFEELGLNYDFGNRCTKREDLWFMSHKGMLRDGLYIPKLE
FT                   KERIVSILEWDRATEPAHRLEAICASMVEAWGYDDLIHEIRKFYAWVLEQAPYNVLASE
FT                   GKAPYISDYALRRLYTEEQMPQENLDQYLRALVDIAKERDDDPQFVEHQSGGTDTVDAA
FT                   DPFKRNQNPVRSSESQMSSQPATTPPQTQLDKDVNVGTSGTFRIPRLKSLSSKLSLPKV
FT                   RGSTAVNLPHLLQYNPNQEQLSNTRATDEQFSAWYEGVKGDYDVTDDEMHIIMNGLMVW
FT                   CIENGTSPNLNGMWVMMDGDTQVTYPIKPLLDYAQPTLRQIMHHFSNLAEAYIEKQNYE
FT                   RPYMPRYGRIRNLTDMSLARYAFDFYEVTSRTPVRAREAHMQMKAAALRNASTKLFGLD
FT                   GKVGTQIEDTERHTAEDVNQHMHNLLGVRGVM"
XX
SQ   Sequence 1815 BP; 564 A; 370 C; 410 G; 471 T; 0 other;
     aacaatagtg ggcagccctc aacagtggtt gacaatacac ttgtggtgat tcttgcgatg        60
     cagtatgcgc tacgacggct gggtttggat gcaactgaac agaaagcaaa ttgtgtttac       120
     tttgcaaatg gtgatgattt agtagttgct gtatctccga gttacacgca catacttgat       180
     aatttgcaga agtatttcga ggaacttggt ttaaactacg actttggcaa cagatgcaca       240
     aaacgtgagg acctatggtt catgtctcat aaggggatgt tgcgcgatgg actgtatata       300
     ccaaaacttg agaaagagag aattgtttct atactcgaat gggacagagc tacagaacca       360
     gctcaccgac ttgaagcaat ttgtgcatca atggttgagg catggggtta tgacgacctc       420
     atacacgaga tacggaagtt ctacgcatgg gtgttggagc aagcgcctta caacgtactc       480
     gcaagcgaag gtaaagcacc atacatctcg gactacgcgc tgcgtcgcct atacacagaa       540
     gaacaaatgc ctcaggagaa tctagatcag tatctacgcg cacttgtaga catcgctaaa       600
     gagcgtgacg acgatccaca atttgtagaa caccagtcag gtgggacgga taccgtggat       660
     gcagcggacc ctttcaagcg aaatcaaaat cctgtgcgta gcagcgaatc acaaatgtct       720
     agtcaacctg caacaacccc tccacagaca cagctggaca aagatgttaa tgttggtaca       780
     agcggcacat ttcgcatacc acgactaaag agcttaagtt caaaactttc acttccaaag       840
     gtccgaggta gcacagctgt aaacctacca catctgttac aatataaccc caaccaagag       900
     caactttcga acactagggc tacggacgaa caattttcag cttggtatga aggggttaag       960
     ggtgactatg atgtcacaga tgatgagatg cacatcataa tgaatggact gatggtgtgg      1020
     tgtatcgaga atggtacttc accaaatctc aacggtatgt gggttatgat ggatggagat      1080
     actcaggtta cttatccgat caaaccacta cttgattacg cacaacccac actacgtcaa      1140
     atcatgcatc atttcagcaa cttggcagaa gcgtacattg aaaaacagaa ttacgagaga      1200
     ccatatatgc caaggtatgg gcggattcga aaccttaccg atatgtcact agcacgttac      1260
     gcttttgatt tttacgaagt gacatcacgc acaccggtgc gtgcacgcga agcgcacatg      1320
     caaatgaaag cagcagcgtt gcgcaatgcc agtacaaaac tttttggact ggacggtaag      1380
     gtcggcacac aaatagagga cacggaaaga cacacggctg aagatgttaa tcagcacatg      1440
     cacaacctgc ttggtgtgcg tggcgttatg taacgtgttt gtccacagat tatttagctt      1500
     aatataagta ttttgtgcgt tagcatcctc tatgctatat agactattat gaattacaga      1560
     gtgatcacat caccacacta gaatttataa tttgtatacc ttgcttacag tatttatgct      1620
     ttgaatagtg agatttcatc tcgtcaaagg gttatactgt gagtgattgt gtacacctta      1680
     taaatttagt gtactatgat attaattatc agtttataat acgtgtatat gtctctttca      1740
     gtatttatgc cctgagcagt gatgttctac atcgtcagga agttttattg agagcgagaa      1800
     aaaaaaaaaa aaaaa                                                       1815
//