ID DQ425095; SV 1; linear; genomic RNA; STD; VRL; 4962 BP. XX AC DQ425095; XX DT 28-MAR-2006 (Rel. 87, Created) DT 28-MAR-2006 (Rel. 87, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment M, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4962 RA Finetti-Sialer M.M., Pasciuto M., Gallitelli D.; RT "Complete nucleotide sequence of Impatiens necrotic spot virus tomato RT isolate found in Apulia (Italy)"; RL Unpublished. XX RN [2] RP 1-4962 RA Finetti-Sialer M.M., Pasciuto M., Gallitelli D.; RT ; RL Submitted (01-MAR-2006) to the INSDC. RL Protezione Piante e Microbiologia Applicata, Universita degli Studi di RL Bari, Via Amendola 165/a, Bari, BA 70126, Italia XX DR MD5; 215796fcdb642ae8897acc3bd8418684. DR EuropePMC; PMC5946465; 29747679. XX FH Key Location/Qualifiers FH FT source 1..4962 FT /organism="Impatiens necrotic spot virus" FT /segment="M" FT /mol_type="genomic RNA" FT /country="Italy" FT /isolation_source="systemically infected leaves" FT /db_xref="taxon:11612" FT CDS 86..997 FT /codon_start=1 FT /product="nonstructural protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:Q1W718" FT /protein_id="ABD93456.1" FT /translation="MNSLFKSLRSSSSRELDHPRVATTLSKQGADIVVHNPSANHNNKE FT VLQRAMDSSKGKILMNNTGTSSLGTYESDQISESESYDLSARMIVDTNHHISSWKNDLF FT VGNGDKSATKIIKIHPTWDSRKQYMMISRIVIWICPTIADPDGKLAVALIDPNKSVNAR FT TVLKGQGSIKDPICFVFYLNWSIPKVNNTSENCVQLHLLCDQSYKKDVSFASVMYSWTK FT EFCDSPRADLDKSCMIIPINRAIRAKSQAFIEACKLIIPKGNSEKQIRRQLAELSANLE FT KSVEEEENVTDNKIEISFDNEI" FT CDS complement(1463..4795) FT /codon_start=1 FT /product="G2-G1 polyprotein" FT /db_xref="GOA:Q1W717" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:Q1W717" FT /protein_id="ABD93457.1" FT /translation="MALKETDAKIHVERGDHPEIYDEAYYDRSVDHKNEILDTLAEMLQ FT NATGKTLRPTRDTQTVLANNEVPQSPSGLSSTPTTISVMDLPNPCLNASSLTCSIKRVS FT TFNVYYQVESNGVIYSCISDTITKLGNCEGSSELPRSFETVPVVPITKIDNKRKLSIGT FT KFYIIESLENYNYPIMYNSRPTNGTVSLQSVKFSGDCKISKTNIVNSYTVSLTTPEKIM FT GYVVKREGSDMSHSIISFSGSVSLTFTEENMDGKHNLLCGDKSSKVPLVDKRVRDCIIK FT YSKNIYKQTACINFSWLRLIIIALIVYFPIRYLVNKTSKTLFLWYDLLGLITYPVLLLI FT NYLWSYFPLKCKVCGNLCLVTHECSKLCICNKNKTSEEHSEECPIITRTAEKNKKYNWA FT SIEWFHLIVNTKISLSFLKAVTETLIGFLILSQMPMSMAQTAQCLDSCYYVPGCDRFVT FT NRYDKCPEKDQCFCAIKENSIVESNFLTNVVTEGPMDCIPYQECKGRITENALVTFVKC FT RFGCEYASIFQSKPLDNGFLEYSGDTLGLNAVNLHFMKRLRNGIIDFYNKTEKYGYISG FT DALKSNESDIPESIFPRKSLIFDSVIDGKYRYMIEESLLSGGGTVFSLNDKSSSTAQKF FT VVYIKKVGIQYDVSEQYTTAPIQSTHTDFFSTCTGKCSDCRKEQPITGYQDFCITPTSY FT WGCEEVWCLAINEGATCGFCRNVYDMDQSFRIYSVIKSTIKSEVCVSGFVGAKCFTVSE FT EVPSESGYFQADILVDFHNDGLTIGQLIAHGPDSHVYAGNIARLNDPSKMFGHPQLSHQ FT GDPIFSKKTLDTNDLSWDCSAIGKKTVTIKSCGYDTYRFKTGLNQISDIPVQFTDQNSF FT YMEKIFSLGKLKIVLDLPSELFKTAPKKPILSSVSLSCKGCFLCSQGLRCAASFISDIT FT FSARLTMKQCSLSTYQIAVKKGANKCNLTMFCTSNPEKQKMIIEPEGDKSYSVEALVDS FT VTVLEPENIIDQNDQYAHEEQQYNSDTSVWSFWDYVKSPFNFIASYFGSFFDTVRVVLL FT ILFVFALAYLCSIVATMCRDYVRNKSYKTKYIEDINDYSLVSTSSDRDTITRRRPPLDF FT SGI" XX SQ Sequence 4962 BP; 1658 A; 850 C; 819 G; 1635 T; 0 other; agagcaatca gtgcatcaaa attatatcta gccgaattca atcattatct tctcaatatt 60 ttaattctta atctaccgtc cagagatgaa tagtttgttt aaatcactaa gatcatctag 120 cagcagggag ctagatcacc ctagggttgc aactacccta tctaaacaag gagcagatat 180 tgttgtacac aacccttctg ctaatcataa caacaaggaa gttctccaaa gagccatgga 240 tagctctaaa gggaagattt tgatgaacaa tacaggcacc tcatcactag gcacatatga 300 gtctgaccag atatctgaat cagagtcgta tgatctttct gctagaatga ttgttgatac 360 aaatcatcat atctccagct ggaaaaatga tctttttgta ggtaatggtg ataaatctgc 420 aaccaagata attaagatac atccaacctg ggatagcaga aaacaataca tgatgatctc 480 aaggatagtt atctggatat gtcctactat agctgatcct gatgggaaat tggctgtagc 540 tttaattgat cctaacaaga gtgttaatgc cagaactgtt ttgaaagggc aaggaagcat 600 taaagatccc atatgttttg ttttttatct aaattggtcc attccaaaag ttaacaacac 660 ttcagaaaat tgtgttcagc ttcatttatt atgtgatcaa agttacaaga aagatgtctc 720 atttgctagt gtcatgtatt cttggacaaa agaattctgt gattcaccaa gagcagatct 780 ggataaaagt tgcatgataa tacccatcaa tagagctatt agagccaaat cgcaagcctt 840 cattgaagcc tgcaagttaa tcatacctaa aggcaattct gaaaagcaaa ttagaagaca 900 actagcagag ctaagtgcta atttagagaa atctgttgaa gaagaggaga atgttactga 960 taacaagata gagatatcat ttgataatga aatctaaata tgttttcatt taataataaa 1020 taatatatat tgttcacaat atattgaatg tttaagtaaa caataaagca agataaaaac 1080 tatatatata tatatatata gaaatataaa atatatatgt atttgtgttt aaaacaaatc 1140 aaaaaccaaa aaggaaaata aaaaataaaa caaaaaacaa aaacaaaaaa caaaaacaaa 1200 caaaaagcaa aaatagaaaa aagaagaaaa accaaaaaaa ttgtaaataa ataaggctcc 1260 ggccagattt ggtctaagac ctttttattt gttttcatac attttatttg tttttgttag 1320 ttttttattt tattattttt atatattttt tatatagttt gctcatttaa cacttattta 1380 gacgaattaa attttatttg gttacagtta ttctacctta tttaatttag aacacatctg 1440 gtgtatattc caatgaattt aatcatatac cgctgaagtc tagaggaggt cttcttctag 1500 tgatggtgtc tctatcagaa gatgtggaaa ccagagaata atcattaatg tcttcaatat 1560 attttgtctt gtaagacttg tttctaacat agtctctgca cattgtggca acaatagagc 1620 agaggtaagc aagagcaaat acaaagagta tgagcaatac tactctgact gtatcaaaga 1680 aggatccaaa gtagcttgct ataaagttaa aagggctttt aacatagtcc caaaagctcc 1740 aaactgatgt gtcagaatta tattgctgtt cctcgtgtgc atattggtca ttttgatcaa 1800 ttatgttttc tggttccagc acagtaacag aatctacaag tgcctcaact gaatatgatt 1860 tgtctccttc tggttctata atcatttttt gtttttctgg gttagaagtg cagaacattg 1920 tcaagttaca cttattagca cctttcttta ctgctatctg gtatgttgac aatgaacatt 1980 gtttcatggt taacctagca gaaaaagtta tgtctgatat gaatgaggca gcacacctca 2040 gcccttggct acataagaaa catcccttac agcttaaaga gacagaactc aatataggct 2100 tttttggtgc agttttaaac aattcagaag gtagatccaa aacaatttta agcttaccta 2160 gactaaagat cttttccata taaaaactat tctggtcagt aaactgaact ggaatatccg 2220 atatttggtt caaacctgtt ttaaatctgt atgtgtcata accgcatgat tttattgtaa 2280 ctgttttttt accaattgct gagcaatccc aggacagatc gtttgtatct aatgttttct 2340 tagagaaaat gggatcacct tggtgtgaaa gttgaggatg accaaacatt tttgatggat 2400 catttaatct agctatgttt cccgcatata catgactatc aggtccatga gctatcagct 2460 ggcctattgt taaaccatca ttatggaaat ccactaatat atcagcctgg aaatatcctg 2520 attcagatgg gacttcctca gatacagtga aacactttgc tcccacaaat ccagatacac 2580 atacttcaga cttgattgtt gatttaataa cagaataaat cctgaaagat tgatccatat 2640 catacacatt tctacaaaac ccacaagtgg ctccttcatt gatagccaaa caccaaacct 2700 cttcacaacc ccagtaagat gttggtgtta tgcagaaatc ttgataccca gttattggtt 2760 gttcttttct gcagtctgag catttacctg tgcatgttga aaagaaatca gtgtgggtgc 2820 tttgtatagg agctgtggtg tattgttcag aaacatcata ctgtattcca acttttttaa 2880 tataaacaac aaacttctga gcagtgctgg aacttttgtc attaagagag aaaactgtgc 2940 ccccacctga taacaaagac tcttctatca tgtatctata ttttccatct atcaccgagt 3000 caaatatgag agattttctt gggaaaatgc tttcaggtat gtctgattca ttagatttaa 3060 gtgcatctcc agaaatgtat ccatattttt cagttttatt gtagaaatca attataccat 3120 tcctaagcct tttcatgaag tggagattca cagcattcaa tcccaatgtg tcaccagaat 3180 attctaagaa cccattatct aaaggcttgc tctggaaaat agaggcatac tcacaaccaa 3240 atctgcattt gacaaaagtt accaaagcat tttcagttat cctacctttg cattcttgat 3300 aaggtataca atccatagga ccttctgtca caacattggt tagaaagtta gattctacaa 3360 tagaattttc tttaatagca cagaaacact ggtctttttc aggacatttg tcatatctgt 3420 ttgtaacaaa gcggtcgcaa ccagggacat aataacagct atccaaacac tgagcagttt 3480 gagccataga cataggcatc tgtgacaaaa taagaaatcc tatcaaagtt tctgtgactg 3540 cttttaggaa agagaggctt atttttgtat taactatcaa atggaaccat tcaatgctag 3600 cccagttgta tttcttattc ttctctgctg ttctagttat tataggacat tcttctgagt 3660 gttcttcaga ggttttgttt ttgttacaaa tacataattt tgagcattca tgggttacca 3720 aacataaatt tccacagacc ttacatttca agggaaaata agaccataaa taatttatca 3780 gtagtagtac aggatacgtt atcaatccca gaagatcata ccatagaaac agtgttttag 3840 atgttttatt taccaagtac cttataggaa aatagacaat cagagcaatt atgatcaatc 3900 tgagccatga gaagttgata caagcagttt gtttgtaaat atttttggag tactttataa 3960 tacaatctct aactcttttg tccactaaag gaactttaga agacttgtca ccgcacaata 4020 ggttatgctt accatccata ttttcttctg tgaaagtcaa actaactgag ccggagaagc 4080 ttattatgga atgactcatg tcacttcctt ctcttttgac aacgtaaccc atgattttct 4140 caggtgtagt taatgaaact gtataagaat taactatgtt tgtttttgat attttacaat 4200 cacctgagaa tttcacactc tggagagaga ctgtgccatt agttggtcta gaattgtaca 4260 tgattggata attgtaattc tccaaacttt caattatata aaatttagtt cctatagata 4320 atttcctttt attatcaatt tttgttattg gtacaactgg aacagtttca aagcttcttg 4380 gcaattcaga agatccttca cagtttccca atttagttat agtgtcactg atacatgaat 4440 atataacacc attgctttct acttggtaat aaacattgaa tgttgaaact cttttaatgc 4500 tacaagtcaa acttgaagca tttaggcatg gatttggtaa atccataact gatatagttg 4560 ttggtgtaga agacaatcca ctcggagatt gaggtacctc attattggca agaacggttt 4620 gagtatctcg tgttggtcta agggttttac ctgttgcatt ctggagcatt tcggccagag 4680 tatctagaat ttcattttta tgatcgacag aacggtcata ataagcttca tcataaattt 4740 ctggatgatc gcccctttca acatgaatct ttgcatctgt ctcctttaat gccataaaag 4800 ataagataac agaagtaaca actagtgtac atacactaat tttaacaagt aactcgcaca 4860 tctttagaat tttcattcta aaaagtcgaa taacactagt tctaaaattg ctttatgagt 4920 ttgatctgtt gtatgtagag ttttgtttgc actgattgct ct 4962 //