ID DQ425094; SV 1; linear; genomic RNA; STD; VRL; 8780 BP. XX AC DQ425094; XX DT 28-MAR-2006 (Rel. 87, Created) DT 28-MAR-2006 (Rel. 87, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment L, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-8780 RA Finetti-Sialer M.M., Pasciuto M., Gallitelli D.; RT "Complete nucleotide sequence of Impatiens necrotic spot virus tomato RT isolate found in Apulia (Italy)"; RL Unpublished. XX RN [2] RP 1-8780 RA Finetti-Sialer M.M., Pasciuto M., Gallitelli D.; RT ; RL Submitted (01-MAR-2006) to the INSDC. RL Protezione Piante e Microbiologia Applicata, Universita degli Studi di RL Bari, Via Amendola 165/a, Bari, BA 70126, Italia XX DR MD5; eb018cc3728048471eeaeaa2b0951c6b. DR EuropePMC; PMC5946465; 29747679. XX FH Key Location/Qualifiers FH FT source 1..8780 FT /organism="Impatiens necrotic spot virus" FT /segment="L" FT /mol_type="genomic RNA" FT /country="Italy" FT /isolation_source="systemically infected leaves" FT /db_xref="taxon:11612" FT gene complement(148..8745) FT /gene="L" FT CDS complement(148..8745) FT /codon_start=1 FT /gene="L" FT /product="L protein" FT /note="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q1W719" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR015841" FT /db_xref="UniProtKB/TrEMBL:Q1W719" FT /protein_id="ABD93455.1" FT /translation="MNNYKARLLIENSVTLLSSIDDCIKSNLELSRDLHKKNPDEISED FT IIINNNAKNYEALRTLIARITRDGEGIETGLATVDMKKISEDMTLLEQKYLETELARHD FT MFGELVSRHLHLRPKKRHDVEIEHAVREYFEELSKKECSNRLSEEDFKKVSKEYVATNA FT TPDNFVIYKESKSGPLCMMIYDWKISVDAKTEAKTTEKYYKNIRKSLKDVKVKGKSFLE FT EHPIFISIVILKPIGSMPIVVTTSRVLEEFEDSESALHANRLRYASQSRLVGVSNIGQI FT IGTTPTVVREFYADTQKLKIEFRSILGEEFGSKDIFFSHWTNKYKDRDPTQIAHSEDLE FT KIIESMVTDDISREEIVHFMFGNFCLRIETMNDQHIADRFNGYRSSCVNLNVEPKKDIS FT ELKDHLLSTKGLWESLYDHHLIKVMDRIKMKKQKEKIIPDIMTAFNLNAEEYEKKYPNC FT FTSDLSETKTNFSVTWSPCTDMVELGNQDYNNAVIDRFRKAFLSNPRIRYNSAYSKEMN FT VTSKAKDVTELVRSCLTTLSCDTSGMDSQQLEDEVDISTGGIKVERTSKSQEWIKKNDC FT LTRNRNEFNMRETSKDNKVIYFKGLSVMNVSMSKKKRIIKHEELKEKITKGLEYDTSER FT QYDPNDDYVSLDLSSFTHAKKLIRHDNEESLEWCSQIQDGLFVLHNSDIRENCKVATVY FT NNYTKNPENLFTQSTIIKTEMETCKKINKLCNDLAIYNYAEDMMQISKGLMVADRYMTK FT ESFKILTTSNTSMLVLAFKGDGLNTGGSGVPYILVHMVEETLSEQFSVCYTKEIYSHFS FT FGSHVVYIMRPQRLNQVRLLSLFKSPSKVPVCFAQFSKKAHELEGWLKIKDMQEVQTLS FT MSSNVRRIMRNIVFSSVMIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIQDKFDPD FT ITNVADMFFVEGIKKLLLKMENLNLSTSAKPVVIDHENDVIGGITNLNIKCPITGATLK FT TLEDLYNNVYLAIYMMPKSLHNHFHNLTSLLNVPAEWELRFRKEMGFTLFEDIYPKQKM FT FQDNELFSINGVLNLKSLSDYYASTVENVGLMRTEIENKEDFLSPCYKISTLKSSKKCS FT QSNIICSDDIINCLQEVNVRLLEDLSPKNLAILKGLLRTLHEDKNRLYEFFEDHSENPY FT YLMEKMKTIKSSEKITTGKSKTSKFIRNNHPLTVETYLKTKLYYRNNITVLKSKKVSEE FT LYDLIKQYHNIMDIDMESIMNLGKGLEGKKHTFLQMLEFVMSKAKNASDAIDFLVSVFE FT KMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQSDPSEAISISGDNKIRALSMLSMDT FT ITSYNDILKNSKNKSKLAFLSADQSKWSASDLTYKYILAIIMNPILTSGECTLMVDCLM FT MYVKLKKVCIPTDIFLGLRNSQEKFGTNETAIGLLTKGLSTNSYPVSMNWLQGNLNYLS FT SVYHSCAMKAYHRMLESYKKCEFQTRWIVHSDDNATSLIADGDIDQMLTDFSSKSLSEM FT VFRSIESHFKSFCITLNPKKSYASSSEVEFISERIVNGAIIPLYCRHLANCCTESSHIS FT YFDDLMSLSINVTMLLRKGCPNEVIPFSYGAVQTQALSIYSMLPGEINDTMRICKKAGV FT NLEHNEIPTNLGGWLTANVESLSLLGPSSNDQTIYYNIIRDFLKKDDFEQVKQSTSSER FT FLDLRFEELKQKKEKDKLELNDKKMIFLMNLFEQSSVSEDSDVLNIGMKFQTMMTQIIR FT LPQFINENALSKMSSYNDFCKLYPHLRKNQQLHNSTKEIKSDEDMLIEDLDDYEKIAPA FT NEMEEVHEIMIKNPETILIAPLNDRDFLLSQLFLYTSPAKRNQLSSQSTEKLALNRILR FT SKARTFINPDSDTKMTYDENLERKISTMKTLNEDSVSVFKTCINLVLKDVNFAMAIPTI FT DNIYPCEARRRDNYNFRWFQTEKWIPVVEGSPGLVVMYSIYGSDYIEKLGLKNIPLTDN FT SMVVLTSTFGSSLMLEDVKYYVKGLEVFETEEFQNSNSCQRAVKACNYMITAQNRLLAI FT NTCFSRKNFPFYSKFNLGRGFVSNTLALMSSIYSKEESFHFMPNVHFKIDKSIRAIINA FT QQDLNLERILDTAVYISDKIQAIFPDITRFDIMTILKNVCIDSVSIWDTLDSKMDKINR FT AMERKMTTSNILLSHNSELNTIQKQIIWLYNMGLCSKKTLNFVIRYIRRSDVRYVRTEE FT QDSFGNYVSGTVYKIGIMNQNNYVQLMASETDIAISLRTPYDIRDERDMLYSAHKDSIE FT KLLSKFLFDKGNVIRSKQSQTVFLNPGQACLRTTTDGKLIAKVNPTPKLLKVANVKPIM FT DINYENVNSDVWSIIESQKQIDLRLPETGECYSEMYKTIDSEQGLIHEMKSNLIRSLTF FT INTFADLNESVYSIDDEVTRETIFDFIDSIRNDCLEGLETCKNVEEYEEFLDTHGFRET FT VSLFKNMIESLESLDAEYSPIFLNITDKYQKFSEDLGNFKSMLLMLKYSLVNDASGFKS FT YRATGAHAIDLTMKKHIEIGEFNLLGLIQLIKACESCHNSDSILNLVSLRNVLSKTYTV FT SSRKIQLYYDINLQNDLMERSYDFKTLVLPDINLSDYSKEILKENGFVVSGENIKIDRE FT IGDEDFVGLASFNVMRLDEEQMYDEIVKDMKIKRKKKGYLFPSNTLILSEMIKFLINGI FT KGTSFDVESLLRNSFNVTIFAGSRLGKVSTSVPSLKIYSTVFMEYEKSDCPLYEISECL FT EGFLKITKSEISEPILEGKLKKVLIQLRNEKNKSKKLEVFRAIYGFLSNNPLCLTDRTL FT YGRMTFEDINRYIMETREIIINKIKELDDGDSSDSIEVLLNYLNEAN" XX SQ Sequence 8780 BP; 2604 A; 1641 C; 1253 G; 3282 T; 0 other; agagcaatca ggcacaacta aaatcttaat ctaaccatac taaatatata aaactaatat 60 taagatcaaa attatggcac tatttgctct ttcagttgta tggctactta tgctagatgc 120 tcatgtaaaa atatttttgg ttcttattta gtttgcttca ttcaaataat tcaaaagtac 180 ttctatgctg tctgaagaat caccatcatc aagttctttg attttattta taattatttc 240 tctagtttcc atgatgtatc tgttgatatc ttcaaatgtc attctaccat ataatgttct 300 gtctgtcaag cataaagggt tatttgataa aaacccatat attgccctga agacttccaa 360 tttcttgctc ttgttttttt catttcttaa ttgaatcaaa accttcttta attttccctc 420 aagtatgggt tcagaaatct ctgatttggt tatttttaaa aatccttcca ggcactctga 480 tatctcatac aaaggacaat cgcttttctc atattccatg aaaactgttg agtagatctt 540 caaagaagga acactagtgc ttactttccc taatctgctt ccggcaaaaa tagtcacatt 600 gaaactgttt ctaagcaaac tctctacatc aaaactagtt ccttttattc catttatcaa 660 gaattttatc atttcgctaa gtatgagagt gttggaagga aacaaatatc ctttcttttt 720 tctttttatt ttcatatctt tcactatttc atcatacatt tgctcttcat ccaatctcat 780 gacattaaag ctagctagac caacaaaatc ttcatcacca atctctctat ctatttttat 840 gttctcacca gaaacaacaa aaccattttc tttcagtatt tcctttgaat aatcagacag 900 attaatatct ggtaaaacca atgtcttgaa atcataactc ctctccatca aatcgttctg 960 taagtttata tcataatata gttggatttt cctactagaa acggtatatg ttttgcttag 1020 aacatttctc aagctcacta gattcaatat agaatcacta ttatggcaag actcgcaagc 1080 tttgatcaac tgtatcaagc ctaataagtt gaattctcct atctctatat gttttttcat 1140 tgttaaatca attgcatgtg caccagtagc tctgtaactt ttgaagccag aagcatcatt 1200 cactagagaa tacttcaaca tcaacaacat tgacttgaaa tttcctaaat cctcggagaa 1260 tttttgatac ttgtcagtta tattcaagaa tatagggcta tattcagcat ccaatgactc 1320 taagctctct atcatgtttt taaaaaggct aacagtttct ctaaacccgt gggtgtccaa 1380 aaattcttca tactcttcaa catttttgca agtttctaaa ccttctagac aatcattcct 1440 tatactatct atgaaatcaa aaatggtttc tcttgtgact tcatcatcta tagaataaac 1500 agattcattc agatctgcaa atgtgtttat aaaagtcaat gacctaatca aattagattt 1560 catttcatgg atcaaaccct gctccgaatc aattgtttta tacatttcag agtaacattc 1620 acctgtttct ggaagtctta aatcaatttg tttttgactc tctattatag accaaacatc 1680 agagttcaca ttttcataat tgatatccat tattggtttt acattggcaa ctttcagcaa 1740 tttaggagtc ggatttactt ttgcaataag cttaccatca gttgttgttc ttagacaagc 1800 ttggcctggg tttaggaaaa ctgtttggct ctgtttggat cgtatcacat tacctttgtc 1860 aaacaaaaat tttgataaaa gtttctcaat gctatcttta tgagcactgt atagcatatc 1920 cctttcatct cttatatcat atggtgttct caaagagatt gcaatatctg tttcagaagc 1980 catcagttgt acataattat tttggttcat gatgccaatc ttataaactg tccccgaaac 2040 atagtttcca aaactgtctt gttcttctgt cctaacatat ctgacatcac ttcttcttat 2100 atatcttata acaaagttca gtgttttttt agaacataga cccatattat acaaccaaat 2160 tatttgtttc tggattgtgt ttaattcact gttatgggac agaagaatgt tagatgtagt 2220 cattttcctt tccatagcac gatttatttt atccattttt gaatctaatg tatcccaaat 2280 ggaaacactg tcaatgcaaa cgtttttcag aatagtcatg atgtcaaatc tagttatgtc 2340 tgggaaaata gcttgtatct tatcagaaat gtacacagca gtgtccaaaa ttctctccaa 2400 atttagatct tgttgtgcat ttattatagc tcttatagat ttgtctattt taaaatgcac 2460 atttggcata aaatgaaatg attcttcttt actgtaaatg cttgacatta atgccaatgt 2520 gtttgacaca aagcctctgc ctaaattgaa tttagaatag aaagggaaat tttttcttga 2580 aaaacacgtg ttaatagcaa gcaacctatt ttgtgctgtt atcatataat tgcaagcttt 2640 cactgctctc tggcagctat tagaattttg gaattcttca gtctcgaata cttcaagacc 2700 tttgacataa tattttacat cctccagcat caagctggat ccaaatgtgc tagttaagac 2760 aaccatgcta ttatctgtca agggtatatt tttcagccct aatttttcta tatagtcaga 2820 accatatatt gaatacatca caactaatcc tggtgaacct tctacaactg gtatccattt 2880 ttctgtttga aaccagcgga aattgtagtt atctcttctc ctggcttcac atggataaat 2940 gttatcaata gttggtatag ccatagcaaa attcacatcc ttcagcacca aatttatgca 3000 tgttttgaat acacttacag agtcctcatt caatgttttc attgtgctaa ttttcctttc 3060 taagttttca tcataggtca tttttgtatc agaatctggg tttatgaagg tcctagcttt 3120 tgatcttaaa atcctgttta atgccaattt ctcagtagat tgacttgaca attgattcct 3180 ctttgcaggg cttgtgtaca gaaataattg gcttaacaaa aaatctctgt catttaatgg 3240 tgctattaaa atagtttcag ggttctttat cattatttca tgcacctcct ccatctcatt 3300 tgcgggagct attttctcat aatcatctaa atcttcaatc agcatgtctt cgtcagactt 3360 gatttcctta gtgctattat gaagttgttg attctttctt agatgagggt ataatttgca 3420 aaaatcatta taactggaca tttttgacaa agcattttca tttataaact gaggcaacct 3480 aattatttga gtcatcattg tctgaaattt catccctata tttaaaacat ccgaatcttc 3540 agatacagaa gactgctcaa atagattcat taaaaagatc atctttttat cattgagctc 3600 taatttatct ttttcttttt tctgtttaag ttcttcaaat cttaaatcaa ggaacctttc 3660 agaggatgtg ctttgtttta cttgctcaaa atcatctttc tttaagaaat ctctgattat 3720 attgtaatag atagtctgat cattagatga tggacctaat agtgacaatg attccacatt 3780 tgcagttaac catccaccta gatttgtggg tatttcatta tgttccagat tcacacctgc 3840 tttcttgcat atcctcatgg tatcattaat ttcacctggt aacatagaat aaatggataa 3900 tgcttgtgtt tgaacagctc cataagaaaa tggaatgact tcatttgggc atcctttcct 3960 taaaagcatt gttacgttta tacttagtga cattaagtca tcaaaataac ttatatgtga 4020 cgattcagtg cagcaattgg ctaaatgtct gcaatatagg ggtataatag ctccatttac 4080 tattctttcg gagataaatt caacttctga agaggaagca tagctttttt taggattcag 4140 agttatgcaa aaactcttaa aatgtgattc aatgcttcta aaaaccattt cagaaagact 4200 tttgctgctg aaatctgtta acatttggtc aatatcacca tcagcaatta aagatgttgc 4260 attgtcatcg gaatggacaa tccatcttgt ttggaactca cactttttgt aactttcaag 4320 cattctatga taagctttca tagcgcaaga atgataaaca gaagataaat aattaagatt 4380 cccttgtaac caattcatgc ttactggata agaattagta gaaagacctt tggtgagcaa 4440 cccaatggct gtttcattag tcccaaattt ctcttgtgaa ttccttaaac ctaaaaaaat 4500 gtctgttgga atgcacacct ttttcaattt cacatacatc atcagacaat caaccattaa 4560 tgtgcactca cctgatgtca atataggatt cattataatg gccaatatat acttgtatgt 4620 taagtcagaa gctgaccact tagattgatc agccgataaa aatgctaact tagatttgtt 4680 cttgctgttt ttcaatatat cattgtatga tgttatcgtg tccatcgaca acatggataa 4740 tgctcttatt ttattgtcac cactaatgga tatggcctct gaagggtcac tttgggcaac 4800 atgcttgaaa gtatgttcta tgaaataaag catcattttt actttcatgc tcatgaggta 4860 aatttctcta tctgttttag ttctttgcat cttttcaaat acagaaacta aaaaatctat 4920 tgcatcagaa gcatttttag ctttagacat gacgaattct aacatttgta ggaaagtgtg 4980 ttttttccct tctagacctt tccctaaatt cattatagat tccatgtcta tgtccatgat 5040 gttatggtat tgtttgatta agtcatacag ttcttcagac actttctttg atttaagaac 5100 agttatatta ttcctgtaat ataattttgt cttcaaatat gtttccactg ttaaaggatg 5160 gttattccga atgaacttag atgtttttga tttacctgtt gttatttttt cagaagattt 5220 gattgtcttc attttttcca taaggtaata agggttttca gagtgatctt caaaaaattc 5280 atacaacctg tttttatctt catgaagagt tctaagcaaa cctttcaaga ttgccaaatt 5340 ttttggactc aaatcttcca gtaatctaac atttacttct tgaagacagt taattatatc 5400 atctgaacaa attatattag attgagaaca cttttttgaa gatttcaaag tggaaatctt 5460 gtaacaagga ctcaaaaagt cttctttgtt ttcaatttct gttctcatca gcccaacatt 5520 ttcaacagtc gatgcgtagt aatcagaaag agattttaag ttcaggacac cgtttataga 5580 aaataactcg ttgtcttgga acatcttttg ttttggatag atatcttcaa ataaagtaaa 5640 ccccatttct tttctgaacc ttaactccca ttctgcaggt acatttagta ggcttgtcaa 5700 attatggaaa tgattgtgga gtgatttagg catcatatat attgccaaat aaacattgtt 5760 gtataaatct tctaatgtct taagagtagc acctgtgatt gggcatttta tgttcaaatt 5820 tgtgattcct cctatcacat cattctcatg atcaataacc acaggttttg cacttgtact 5880 taaatttaag ttttccattt tgagaagaag cttttttatt ccttcaacaa agaacatgtc 5940 agcaacattt gttatgtctg gatcaaattt atcttgtatg tattctttta tatttgaata 6000 gtctgataaa ggtaggaatc ctgcatatct catgaagtca aagattccca tcctgctaag 6060 ctttgtgact gttcctatca tgacagaaga aaagacaata tttctcatta ttcttcttac 6120 attagagctc atgcttagtg tttgcacttc ttgcatatct tttattttca accacccttc 6180 taattcatga gcttttttgg aaaactgagc aaaacaaact ggaactttgc tgggagattt 6240 gaaaaggcta agaagtctaa cttggttcag cctttgcggc ctcataatat atacaacatg 6300 actaccaaat gagaaatgac tatatatttc ttttgtgtaa cacacactaa actgctcaga 6360 tagagtctct tccaccatgt ggactagtat gtaaggaact cctgaccctc ctgtgtttag 6420 cccatctcct ttaaaagcca aaactagcat gctagtattt gaggttgtca atatcttgaa 6480 actttcttta gtcatgtacc tgtcagcaac catcaaacct ttagatattt gcatcatgtc 6540 ctcggcataa ttgtatatag ctagatcatt gcataatttg tttatctttt tacaagtttc 6600 catttctgtt tttatgatag ttgattgagt gaaaagattt tcaggatttt ttgtataatt 6660 gttgtaaaca gtagccactt tgcaattttc tctaatgtct gagttatgaa gaacaaataa 6720 tccatcttgg atctgtgagc accattctaa gctctcttca ttatcatgtc tgataagctt 6780 ctttgcgtgg gtgaatgaag ataaatccaa actcacataa tcatcattag ggtcatactg 6840 tctctctgat gtatcatatt ctagaccttt tgtgattttc tcttttagtt cctcatgctt 6900 tattatcctt ttctttttac tcatgctcac gttcataaca ctcaaacctt taaaatagat 6960 cactttatta tctttactgg tttccctcat gttaaactcg tttctatttc tagtcaaaca 7020 atcatttttc ttaatccact cttgtgattt gctagttctt tccactttta taccacctgt 7080 gcttatgtca acttcgtctt ccaattgctg ggagtccatt ccacttgtat cacagcttag 7140 agttgttaga caggacctga caagttcagt cacatccttt gctttgctgg tcacattcat 7200 ctctttgcta taagctgaat tatatctgat cctaggattg ctaaggaaag ctttcctgaa 7260 ccgatcaata actgcattat tataatcttg gtttcctagt tccaccatat cagtgcaagg 7320 tgaccaagtg acagaaaaat ttgtctttgt ttcagagaga tcacttgtga aacaatttgg 7380 gtatttcttt tcatactctt cagcattcaa gttgaatgca gtcattatgt caggtataat 7440 cttttctttt tgttttttca tttttatcct atccataacc ttaatcaaat gatgatcata 7500 taaagattcc cacaaaccct tagtagataa cagatgatct tttaactctg aaatgtcttt 7560 cttaggttct acattcagat tcacacaaga ggatctatac ccattaaatc tatcagcaat 7620 atgttgatca ttcattgtct ctatacgcaa gcaaaaattc ccaaacataa aatgaacaat 7680 ttcttcccta cttatgtcat ctgttaccat tgattcaatt atcttctcca aatcttctga 7740 atgagcaatc tgtgttggat ctctgtcttt atatttattt gtccaatgac taaaaaatat 7800 gtctttagag ccgaactctt cacccagtat gctcctaaat tcaattttta acttttgagt 7860 gtctgcataa aattctctaa caacagtagg agttgtgcca attatctggc ctatgttaga 7920 caccccgaca agccttgatt ggcttgcgta tctcaaccta ttggcatgca atgcagattc 7980 tgaatcttca aattcctcta agactctgct agtcgtgacc actataggca tagatccaat 8040 aggtttaaga ataacaatag agatgaatat aggatgctct tccaggaaag atttaccctt 8100 gactttcaca tctttcaatg atttccgtat gtttttgtaa tatttctctg ttgttttagc 8160 ttctgtttta gcatcaacag aaattttcca atcatagatc atcatgcaaa gaggaccact 8220 cttagattct ttgtatatca caaagttatc aggagtagca ttggtagcaa catattcttt 8280 actgaccttt ttgaaatctt cttcagacag tctgttagaa cattctttct tgcttagctc 8340 ttcaaaatac tctctgacag catgctctat ctccacatca tgtctttttt taggtcttaa 8400 atgcaaatgt cttgaaacca gctcaccgaa catatcatgt ctagctagtt cagtttcaag 8460 atatttctgc tcaaggagag tcatgtcttc agatatcttt ttcatgtcaa ctgtagccaa 8520 tcctgtttca atcccttcac catccctagt aattcttgct attagagttc ttaaagcttc 8580 atagttttta gcattgttat ttataataat atcttcactt atttcatctg ggttcttttt 8640 atggaggtct ctgcttaact ctaaattgct tttgatacaa tcatcaattg acgatagtaa 8700 agtaacagaa ttttctatta ataatcttgc tttgtaattg ttcattctga ataaattgtt 8760 gttgcctgat tgctctaatc 8780 //