ID   DQ421788; SV 2; linear; mRNA; STD; VRL; 855 BP.
XX
AC   DQ421788;
XX
DT   25-APR-2006 (Rel. 87, Created)
DT   07-JAN-2009 (Rel. 98, Last updated, Version 3)
XX
DE   Sugarcane streak mosaic virus isolate CB671-1 coat protein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Sugarcane streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Poacevirus.
XX
RN   [1]
RP   1-855
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   "Sugarcane streak mosaic virus CB671-1 isolate from mixed infection coat
RT   protein gene";
RL   Unpublished.
XX
RN   [2]
RP   1-855
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   ;
RL   Submitted (01-MAR-2006) to the INSDC.
RL   Plant Pathology, Sugarcane Breeding Institute, Sugarcane Road, Coimbatore,
RL   Tamil Nadu 641007, India
XX
RN   [3]
RC   Sequence update by submitter
RP   1-855
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   ;
RL   Submitted (10-JAN-2007) to the INSDC.
RL   Plant Pathology, Sugarcane Breeding Institute, Sugarcane Road, Coimbatore,
RL   Tamil Nadu 641007, India
XX
DR   MD5; 0c796c04a51834c88dde683341aa2578.
XX
CC   On Jan 5, 2009 this sequence version replaced gi:93009161.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..855
FT                   /organism="Sugarcane streak mosaic virus"
FT                   /host="Saccharum sp. hybrid"
FT                   /strain="CoC 671"
FT                   /isolate="CB671-1"
FT                   /serotype="CBE(Tamil Nadu)"
FT                   /mol_type="mRNA"
FT                   /country="India"
FT                   /isolation_source="mixed infection"
FT                   /PCR_primers="fwd_seq: ttggatccggacaaggaacgcagccacctc,
FT                   rev_seq: tataaagctttcagtgctgagcacgcccaactg"
FT                   /db_xref="taxon:53954"
FT   CDS             <1..851
FT                   /codon_start=3
FT                   /product="coat protein"
FT                   /db_xref="GOA:B8K2A6"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:B8K2A6"
FT                   /protein_id="ACL14909.1"
FT                   /translation="TGTQPPQNQSSSPATTSSISSTTTSQVESQTTGNLTNTVSQTMKS
FT                   LYVPPLVKSLKTEAKAKQMMRYTPPQALISSSAASIRQFNDWANTAAEGYGKTIQQFTD
FT                   EILPFWIYWCVVNGATEENKTKPKWTKAVLNLDGADGTEITVDENGPQVEFEMGPMYRN
FT                   AKPGIRAIMRHFGELAYKWVQFSVRSGKPIIPHNAVKAGLTTPEFYPCCIDFVMVNIPS
FT                   PAEIDVRNQVINARTPRMGKPLFRHALRAGGDEDTDLRREDDANYGRTQIGGAQFGRAQ
FT                   H"
XX
SQ   Sequence 855 BP; 265 A; 198 C; 222 G; 170 T; 0 other;
     ggacaggaac gcagccacct cagaatcaga gtagttcacc agcgacaaca tcaagcatat        60
     catctaccac aacaagtcaa gtagagagtc aaacgacggg gaacttaacc aacacggttt       120
     cacaaacgat gaagtctcta tacgtaccac cactggttaa gtcactcaaa acagaggcca       180
     aggcaaagca gatgatgagg tacacaccac cacaggcact tatatcttca tcggccgcat       240
     cgatacggca gttcaatgat tgggcaaaca cagcggctga agggtatgga aagacaattc       300
     aacagttcac ggatgagata ctccctttct ggatctactg gtgtgttgtc aacggtgcaa       360
     ctgaagagaa taagacaaag ccaaagtgga cgaaagctgt gttgaatcta gacggagcag       420
     atggcacaga gattaccgtg gatgaaaacg gaccccaagt ggagtttgaa atggggccga       480
     tgtacagaaa cgccaaacct ggtattcgcg caatcatgag acattttggc gaattggcgt       540
     acaagtgggt tcagttctcg gttcgtagcg ggaaacccat aataccacac aatgcagtga       600
     aggcaggatt gaccacacca gagttttatc cttgctgcat tgatttcgtg atggtgaaca       660
     tcccctcacc agcagaaatc gacgtgcgta accaggtaat taacgcacgc acaccccgga       720
     tgggaaagcc tttattccgt catgctctta gagccggggg agatgaggac acggacctgc       780
     gtagggaaga tgatgcaaat tatggaagaa cgcagatcgg tggcgctcag tttgggcgtg       840
     ctcagcactg aaagc                                                        855
//