ID   DQ412999; SV 1; linear; genomic RNA; STD; VRL; 1772 BP.
XX
AC   DQ412999;
XX
DT   01-APR-2006 (Rel. 87, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
XX
DE   Hydrangea chlorotic mottle virus 12 kDa protein (TGB2) gene, partial cds;
DE   and triple gene block protein 3, coat protein (CP), and putative nucleic
DE   acid-binding protein genes, complete cds.
XX
KW   .
XX
OS   Hydrangea chlorotic mottle virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1772
RX   DOI; .1094/PDIS-93-9-0891.
RX   PUBMED; 30754527.
RA   Machado Caballero J.E., Lockhart B.E., Mason S.L., Daughtrey M.;
RT   "Identification and Properties of a Carlavirus Causing Chlorotic Mottle of
RT   Florists' Hydrangea (H. macrophylla) in the United States";
RL   Plant Dis. 93(9):891-895(2009).
XX
RN   [2]
RP   1-1772
RA   Machado J.;
RT   ;
RL   Submitted (21-FEB-2006) to the INSDC.
RL   Plant Pathology, University of Minnesota, 495 Borlaug Hall, 1991 Upper
RL   Bouford Circle, St Paul, MN 55108, USA
XX
DR   MD5; c8dc3d54da3a15016bb8fe3690a9ae60.
DR   EuropePMC; PMC3689765; 23805334.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1772
FT                   /organism="Hydrangea chlorotic mottle virus"
FT                   /host="Hydrangea macrophylla"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="purified viral particles"
FT                   /db_xref="taxon:375546"
FT   gene            <1..246
FT                   /gene="TGB2"
FT   CDS             <1..246
FT                   /codon_start=1
FT                   /gene="TGB2"
FT                   /product="12 kDa protein"
FT                   /note="ORF-III; HyCMVprot3"
FT                   /db_xref="GOA:Q1WAJ1"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q1WAJ1"
FT                   /protein_id="ABD95727.1"
FT                   /translation="VGLLTRSTLPHVGDLQHSLPHGGRYRDGTKSVDYCSPRKLNSVER
FT                   GFQGQWLIWPLVIVLVGLVIFLSKKRSNCYACGATH"
FT   CDS             228..434
FT                   /codon_start=1
FT                   /product="triple gene block protein 3"
FT                   /note="ORF-IV; HyCMVprot4"
FT                   /db_xref="GOA:Q1WAJ0"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q1WAJ0"
FT                   /protein_id="ABD95728.1"
FT                   /translation="MWGDSLSLVVGLLCFALTLYFFYPSEQKQCIITLTGESIRIAGCE
FT                   LRPEHIEAIAKLKVLSAPLGEQA"
FT   gene            461..1324
FT                   /gene="CP"
FT   CDS             461..1324
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="ORF-V; HyCMVprot5"
FT                   /db_xref="GOA:Q1WAI9"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q1WAI9"
FT                   /protein_id="ABD95729.1"
FT                   /translation="MPPKENPILQKQEEGSGSNESNVERNAXHEASEQRRRPPRPTGGN
FT                   HESQLEQRLTKLIDTLNEGRYNSNLQNISFEIGRPNLEPVPEMKRNPANPYGRFSVDEL
FT                   FKMPVSTVSNNMANTEEMAKISSALAGMGVPTEFVAEVILKMAIMCASVSSSAFLDPSG
FT                   SIEFPGGAIPVDSVAAIMKRESGLRRVCRLYAPVVWNSMLVRKQPPSDWQAMGFPFNAR
FT                   YAAFDTFDYVTNAAAIQPVEGLIRLPTPAEYIAHNAHKRLAIDKSNRNEKFANLETEVH
FT                   WRPSRG"
FT   CDS             1345..1677
FT                   /codon_start=1
FT                   /product="putative nucleic acid-binding protein"
FT                   /note="ORF-VI; HyCMVprot6"
FT                   /db_xref="GOA:Q1WAI8"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:Q1WAI8"
FT                   /protein_id="ABD95730.1"
FT                   /translation="MQAMEDRENKRLLAIINVCRKYGVYDVNXCLHIFRRSSGLLLGNG
FT                   KSSYARRRRAKSIGRCERCYRVYPPICNSKCDNRTCRPGMSPNIKVVDYIRCGVTEVIP
FT                   HPGYNF"
XX
SQ   Sequence 1772 BP; 501 A; 363 C; 464 G; 439 T; 5 other;
     gttgggttgc tgacgagatc tacactgcca cacgtgggtg acttgcaaca tagtctaccg        60
     cacggaggtc ggtacaggga cgggactaag tcggtcgatt actgttctcc aaggaaacta       120
     aattcagtcg agcgtggttt ccaggggcag tggttaattt ggcccttggt tatcgttctt       180
     gtggggctcg tgattttcct aagcaaaaaa cgctcgaatt gctacgcatg tggggcgact       240
     cattgagcct agttgttggt ttactttgct tcgcattaac tctgtacttt ttctatccaa       300
     gcgaacaaaa gcagtgcata atcactttga ctggtgaatc gatccggatt gcgggttgcg       360
     aattgaggcc tgagcacata gaagctattg ccaaattgaa ggtgttgagt gcgcctttag       420
     gtgagcaggc gtaatttgat attaaacatt acacaagaag atgccgccaa aagagaatcc       480
     gattctacag aagcaagagg agggctcagg gtctaacgag agcaatgtgg aacggaatgc       540
     gcancatgaa gcgtcagagc aaaggagaag accaccaaga cctacgggtg gcaatcacga       600
     gagtcagctt gagcagcgcc tgaccaaact gatagataca ttaaacgaag ggaggtacaa       660
     ctcgaacttg cagaacatat ctttcgagat tggtaggccc aacctggaac cggtcccaga       720
     gatgaaaagg aatccagcca acccatatgg acggttctcg gttgatgagc tgtttaagat       780
     gcctgttagc accgtgtcta acaacatggc taatacagaa gaaatggcaa aaatatcatc       840
     tgctttggct ggtatgggag taccgaccga gtttgttgca gaggtaattc tgaagatggc       900
     catcatgtgc gcaagtgtga gtagctccgc ctttctcgat ccgagtggta gtattgaatt       960
     ccccggagga gctatacctg tggactctgt tgcggcaatt atgaagcgcg aatctggttt      1020
     gaggcgtgtc tgcaggctgt acgccccagt ggtatggaac agtatgcttg tgagaaaaca      1080
     gccgccctct gactggcagg ccatgggctt tcctttcaat gctcgttatg cagccttcga      1140
     cacgttcgat tacgtgacta acgctgctgc tatacagcca gtcgaagggc tgattaggct      1200
     gccgacgcca gcggagtata tcgcacacaa tgctcacaag aggcttgcca ttgacaagtc      1260
     taacaggaat gaaaagttcg cgaatctgga gacagaagta cactggcggc cttcaagggg      1320
     ctgaaatatc aaggaaccat cgaaatgcag gcaatggagg accgtgagaa caagcgtctg      1380
     ttagcaataa ttaatgtgtg tcgcaagtat ggtgtgtatg atgttaacnt atgtttgcat      1440
     atattccgta gatcctctgg cttgttactt ggtaatggga aatctagcta tgctagaaga      1500
     cgcagagcca agtcaatagg caggtgtgag aggtgttatc gtgtgtatcc gcccatatgt      1560
     aattccaagt gtgataaccg gacctgcagg cctggtatgt caccaaatat caaggtggtc      1620
     gactatatca gatgtggagt aactgaggtg ataccacatc caggatacaa tttctgacca      1680
     agttgtgctt aaaacntaaa taataaataa gggcatgaac tataaacaca tttctgtttt      1740
     aaaactattt ttccnnaaaa aaaaaaaaaa aa                                    1772
//