ID DQ412731; SV 1; linear; genomic RNA; STD; VRL; 3048 BP. XX AC DQ412731; XX DT 18-MAR-2006 (Rel. 87, Created) DT 18-MAR-2006 (Rel. 87, Last updated, Version 1) XX DE Cucumber mosaic virus isolate Phy segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3048 RA Liao Q., Du Z., Chen J.; RT "Clone of the complete genome and construction of infectious transcripts RT RNA in Cucumber mosaic virus Chlorosis strain"; RL Unpublished. XX RN [2] RP 1-3048 RA Liao Q., Du Z., Chen J.; RT ; RL Submitted (22-FEB-2006) to the INSDC. RL College of Life Sciences, Zhejiang University, Kaixuan Road 268#, Hangzhou, RL Zhejiang 310029, China XX DR MD5; 56b8f0833a512cdb2c63eb959bee23de. DR EuropePMC; PMC3030956; 21265043. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3048 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /isolate="Phy" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:Q202D7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q202D7" FT /protein_id="ABD73003.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAGDVSESVTEDAHSLRIPDGAPSEEVSVEFVTYGAEDYLGKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPNTSYRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDVQMDISSREVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTDASPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMVGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERLSSTKQRKKKDGIERRRSDKRRTPTGSYDGGEEAETKVSQAEST FT GTRSQKSQREGAFKSQTVPLPTVLSSRWFGTDRDVPPCEHGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q202D6" FT /protein_id="ABD73004.1" FT /translation="MELSEGAVTNVELQLARMMEAKRLRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFCQVDGSELIEMYHHVSMVGLSESEAPCFTLPAEEDHDFDDTDWFAGN FT EWAEGSF" XX SQ Sequence 3048 BP; 744 A; 681 C; 735 G; 888 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcctc tgtaaaactc cctagacttt 60 ctagtttctt tctttcctat ggctttccct gcccccgctt tctcactagc caatcttttg 120 aacggtagtt acggtgtcga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcttg tcgtaattac aggcccctac ccgctgggga tgtcagcgag 240 agtgtcacag aggatgcgca ttccctccga attccagacg gagctccctc cgaagaggtg 300 tctgtagagt ttgttactta tggtgctgaa gattaccttg gaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacaattgtg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gctatggcca gagctttgtt gttggcgccc 480 aatacatcct accgaaccat gaagtgtttt gaggacctag tcgcggctat ttacactaaa 540 tccgatttct attacgatga tgagtgtgaa gccgacgacg ttcagatgga tatctcgtct 600 cgcgaagtac ccggctattc tttcgagccg tggtcccgaa cgtctggatt tgaaccaccg 660 cctatctgcg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ttaaagaaat cgtgcgctga gaggacattc gctgatgatt atgttatcga aggtttagat 780 ggtgttgtcg acaatgcgac tctgttgtcg aatttaggtc catttttggt gcctgtgaaa 840 tgtcagtatg agaaatgtcc aacacccacc gatgcgagtc ctccgagtct taatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatctgtg actcgactct gcccacacat 960 agtaactacg acgattcttt ccatcaagta tttgtcgaga gtgcagacta ttctattgat 1020 ctggatcatg ttagacttcg ccagtctgat cttattgcaa aaattccaga ttcagggcat 1080 atgataccgg ttttgaacac cgggagtggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcta tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccagattga gcaaggctgt ggctgagaga ttcttcattt catatatcaa tggtaactct 1260 ctagcgtcca gcaactttgt taatgtcgtt agtaacttcc acgattacat ggaaaaatgg 1320 aagtcctcag gtctttcgta tgatgatctt ccggatcttc atgctgagaa tttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaaa cctgtagtga gcgacacact caacatcgac 1440 agaccggttc cggctactat aacgtatcat aagaagggta taacctccca gttctcaccg 1500 ttgtttactg cgctatttga gcgtttccag agatgccttc gagaacgcat tattcttcct 1560 gttggaaaga tttcatccct tgagatggta ggatttgatg ttaagaacaa gcactgtctc 1620 gagatcgatt tgtccaaatt cgacaagtct caaggtgaat tccatttaat gatccaggaa 1680 catattttga atggtctagg gtgcccagct ccgataacta agtggtggtg tgatttccac 1740 agattctctt acattagaga ccgtagagct ggcgttggta tgcctatcag tttccagaga 1800 cgaactggtg atgcattcac ctatttcggt aacaccattg tcaccatggc tgagtttgcg 1860 tggtgttatg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtac ttccccctgt tggtgatccg agtaaattca caactctttt caacatggaa 1980 gctaaggtga tggagcccgc agtaccatat atttgttcga agttcttact ctctgacgag 2040 ttcggtaaca ctttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggcacgaag 2100 aaaatcccct attcagacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc cctctttttc 2220 gagttgaaat acaggaagtc tggggctgag gctgccttaa tgttaggcgc cttcaagaaa 2280 tataccgcta attttcagtc ctataaagaa ctctactatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagtta aggattgagc gtttgagttc cactaagcag 2400 cgaaagaaga aagatggaat tgagcgaagg cgcagtgaca aacgtcgaac tccaactggc 2460 tcgtatgatg gaggcgaaga ggctgagacg aaggtctcac aagcagaatc gacgggaacg 2520 aggtcacaaa agtcccagcg agagggcgcg ttcaaatctc agactgttcc gcttcctacc 2580 gttctgtcaa gtagatggtt cggaactgat agagatgtac caccatgtga gcatggtggg 2640 attgtccgag tctgaggccc cttgttttac gttgccagcg gaagaagacc atgatttcga 2700 cgatacggat tggttcgctg gtaacgagtg ggcggaaggg tcgttttgaa cctccccttc 2760 cttaactccc tccggttttc tgaggcggga gctgagttgg cagtattgct acaaactgtc 2820 tgaagtcact aaacgtttta cggtgaacgg gttgtccatc cagctaacgg ctaaaatggt 2880 cagtcgtgga gaaattcacg ccgaaggctt acaagtcttc gaggctcctt tgaaaccatc 2940 tcctaggttt cttcggaagg acttcggtcc gtgtacttct agcacactgt gctagtttca 3000 gggtacgggt gcccctccgc tttgcggggg tcctccaaaa ggagacca 3048 //