ID   DQ407932; SV 1; linear; genomic RNA; STD; VRL; 1609 BP.
XX
AC   DQ407932;
XX
DT   15-MAR-2006 (Rel. 87, Created)
DT   14-JUL-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Nerine yellow stripe virus - New Zealand polyprotein gene, partial cds.
XX
KW   .
XX
OS   Nerine yellow stripe virus - New Zealand
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1609
RA   Wei T., Pearson M.N., Cohen D.;
RT   "First report of Nerine yellow stripe virus from Vallota speciosa in New
RT   Zealand";
RL   Unpublished.
XX
RN   [2]
RP   1-1609
RA   Wei T., Pearson M.N., Cohen D.;
RT   ;
RL   Submitted (16-FEB-2006) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, 3a Symonds
RL   Street, Auckland City, Auckland 92019, New Zealand
XX
DR   MD5; 980bca3d1bf3d72a92b91e9f735f2e6e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1609
FT                   /organism="Nerine yellow stripe virus - New Zealand"
FT                   /host="Vallota speciosa"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /db_xref="taxon:454642"
FT   CDS             <1..1419
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="nuclear inclusion body and coat protein"
FT                   /db_xref="GOA:Q207I0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q207I0"
FT                   /protein_id="ABD72221.1"
FT                   /translation="NSGQPSTVVDNTLMVVIAMQYSLLLNGIELEQQDSVCKYFANGDD
FT                   LLIAIEPTYATRLYDSFACNFKQLGLNYDFSNRVLNKEELIFMSHKGVLVDGLYVPKLE
FT                   RERIVSILEWDKSSEPEQRLEAICAAMIEAWGYKDLLHEIRKFYAWVLEQAPYSELARN
FT                   GKAPYLAETALRHLYTNSETKNEELLNYIEAFQSDVSLDEEIIDVMFQSQETINAGAEL
FT                   ARAQQAQTPATPSQDVNVGTSGQTALIQSKIFSKKLRIMKVKGKTTLDLEHLLHYKPIQ
FT                   EDLFNTKASQQQFENWHTKVQEAYDVDDKQMGILMNGLIVWCIENGTSSELKGTWRMDF
FT                   GDQQVEYDIQPLIQYSQPTFRQIMRHFSKTAEAYIAMRNQEERYMPRYALQRGLTDISL
FT                   ARYGFDFFDTTAATPQRAREAVMQMKAAAVRGKETRLFSLDGNISANTENTERHTVEDV
FT                   TQDMHSLLGVRGIK"
XX
SQ   Sequence 1609 BP; 526 A; 273 C; 362 G; 448 T; 0 other;
     aacagcgggc agccttcaac ggtagtggat aacacactta tggtcgtcat agccatgcaa        60
     tattcactac tgttgaatgg cattgaatta gagcagcaag actctgtttg taaatatttt       120
     gccaacggtg atgatttgct catagctata gaaccaacat atgcaactag attgtatgat       180
     agttttgcat gtaattttaa acagttgggt ttgaactatg atttctcaaa tagggtttta       240
     aataaggaag agttgatttt tatgtctcat aagggtgttt tggttgatgg cttgtatgta       300
     ccaaagctcg agcgtgagcg catcgtctca attcttgaat gggacaagag ttcagaacct       360
     gagcaacgat tagaggcgat ttgtgctgct atgattgagg cttggggtta taaggatttg       420
     ttgcatgaaa tcaggaaatt ctatgcttgg gtcctcgagc aggctccata ctctgaatta       480
     gctcgtaatg gaaaggcacc atatttggct gagacagctc taaggcatct atatacaaat       540
     tctgaaacaa agaatgagga gctattaaat tacattgaag cttttcaatc tgatgttagt       600
     cttgatgagg aaatcattga tgtgatgttt caatctcaag aaaccatcaa tgctggagct       660
     gaattagcta gagcgcaaca agcacaaaca ccagcaactc caagccagga tgtgaatgtg       720
     ggaacttccg gacaaactgc actaatacaa tcaaagatat tctcgaagaa acttcgaatc       780
     atgaaggtaa aaggaaaaac aacacttgat cttgaacatc ttttgcatta taaaccaatt       840
     caagaggact tgttcaatac aaaagctagt caacagcaat ttgagaactg gcacacaaaa       900
     gtgcaagaag catatgatgt tgacgacaaa caaatgggaa tcttaatgaa tggattgatt       960
     gtttggtgta tcgagaacgg aacttcttct gaattgaaag gaacatggag aatggatttt      1020
     ggggatcaac aagtcgaata tgatattcaa cctttgatac agtacagcca gccaactttt      1080
     cgccaaataa tgagacattt tagtaagaca gctgaagcgt atatagctat gcgaaaccaa      1140
     gaagaacgct atatgccaag atatgcgctt cagaggggcc tcactgatat tagcctagca      1200
     cgatatggtt ttgatttctt tgatacaaca gcagcaactc cgcaacgggc acgggaggcc      1260
     gttatgcaaa tgaaagcagc tgctgtgcgt ggaaaagaaa caagattatt ttcacttgat      1320
     ggtaatatta gtgcaaacac agaaaacact gagcgacata ctgttgagga cgtcactcag      1380
     gatatgcact cacttcttgg tgtgaggggt ataaagtgag taagtgggga gcttcttgta      1440
     tcctatagat aaattaaggt cttattttat ctatttgtat ccaggaatcc tgtagttttg      1500
     gctacccgtg tggttttgtc ggttgtagtg tgattgtatc acctcaaaca gcggactcaa      1560
     ttacacattc ggtagggaaa tctataagga gacaaaaaaa aaaaaaaaa                  1609
//