ID DQ400847; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC DQ400847; XX DT 14-MAR-2006 (Rel. 87, Created) DT 10-JAN-2008 (Rel. 94, Last updated, Version 2) XX DE Mungbean yellow mosaic India virus segment DNA A, complete sequence. XX KW . XX OS Mungbean yellow mosaic India virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2744 RX DOI; 10.1016/j.jviromet.2007.08.004. RX PUBMED; 17870189. RA Rouhibakhsh A., Priya J., Periasamy M., Haq Q.M., Malathi V.G.; RT "An improved DNA isolation method and PCR protocol for efficient detection RT of multicomponents of begomovirus in legumes"; RL J. Virol. Methods 147(1):37-42(2008). XX RN [2] RP 1-2744 RA Rohibakhsh A., Malathi V.G.; RT "Complete nucleotide sequences of DNA A and DNA B genome of yellow mosaic RT virus isolate from blackgram in Ludhiana, India"; RL Unpublished. XX RN [3] RP 1-2744 RA Rohibakhsh A., Malathi V.G.; RT ; RL Submitted (07-FEB-2006) to the INSDC. RL Plant Pathology, Indian Agricultural Research Institute, Pusa Road, New RL Delhi, Delhi 110 012, India XX DR MD5; cc29a8ebb6aea34a115f3710404a4f3e. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Mungbean yellow mosaic India virus" FT /segment="DNA A" FT /mol_type="genomic DNA" FT /country="India:Punjab Agricultural University" FT /isolation_source="Blackgram plant" FT /db_xref="taxon:223287" FT gene 156..497 FT /gene="AV2" FT CDS 156..497 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q209X0" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:Q209X0" FT /protein_id="ABD67439.1" FT /translation="MWDPLLNDFPKSVHGFRCMLAIKYLQQVQENYPSNSLGYSYLTGL FT IQVLRIRNHAKADLRYCILYPDIECTEEIELRYPAHAACLCGRCPYQHEKEALDQPPHV FT EETSVLPTV" FT gene 316..1092 FT /gene="AV1" FT CDS 316..1089 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="virion assembly" FT /db_xref="GOA:Q209W9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q209W9" FT /protein_id="ABD67438.1" FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLMLPASAGGVPTNMKRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITH FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE FT PSTATVKNDLRDRYQVLRKFSATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN" FT gene complement(733..984) FT /gene="AC5" FT CDS complement(733..984) FT /codon_start=1 FT /gene="AC5" FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:Q209W8" FT /protein_id="ABD67443.1" FT /translation="MVLILRCLLVVVNNIIINLEETIHHGLFFTSILATRNSGTKLSQD FT LITITQIVLHSSCTGLVVIHVEHLTEIHGCTKWSSVTT" FT gene complement(1086..1490) FT /gene="AC3" FT CDS complement(1086..1490) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="replication enhancer protein" FT /db_xref="GOA:Q209W7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q209W7" FT /protein_id="ABD67441.1" FT /translation="MDFRTGESITAAQLRNGVYIWEVQNPLSFKIMHHSPILAESRMMV FT TKLRIMFNHRLKIALGMHKCFLDLKLYHYMKATSGMILSIFRDQLFKFLNNLGVISLAN FT ILYFASDFLYNKLHLVEDVSFTHNVQYNLY" FT gene complement(1216..2625) FT /gene="AC1" FT CDS complement(1216..2625) FT /codon_start=1 FT /gene="AC1" FT /product="Rep" FT /note="replication initiator protein" FT /db_xref="GOA:Q209W6" FT /db_xref="InterPro:IPR000942" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q209W6" FT /protein_id="ABD67440.1" FT /translation="MPREGRFAINAKNYFLTYPKCPLTKEDALEQLLALSTPVNKKFIR FT ICRELHEDGQPHLHVLLQFEGKQQTKNQRFFDLHSRCRSAYYHPNIQAAKSCSDVKTYM FT EKDGDILDHGTFQIDGRSARGGQQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH FT NLNCNLSRIFTEPTQAYESPFTLESFDKVPSYISSWAERNVRDPAARPDRPISIVIEGD FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKSTWMKRTMLRLNSGLQRMRNSTPSKNHC FT SPPSIKVQHRVAKKRAIRRSRIDLKCGCSYYIHINCRNYGFSHRGEHHCSSTQEWRLYL FT GGAKSPLFQDHAPQSNSSRVQNDGHQAANNVQPQVEDSTGDAQVLPGLEALPLYEGDFW FT DDLIDLPRPII" FT gene complement(2175..2474) FT /gene="AC4" FT CDS complement(2175..2474) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q209W5" FT /protein_id="ABD67442.1" FT /translation="MKMDNLISMFCFSSKGNNKRKTKGSSTSIPDADRHITIRTFRQLK FT AAQMLKHTWRKTETFLIMEPSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY" XX SQ Sequence 2744 BP; 727 A; 577 C; 615 G; 825 T; 0 other; acctgagtgc cccgcgaccg gtgtattggg gttactttaa cttttctgct tttgtggtac 60 ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc tatgttaatt caattttgaa 120 ttataaagca agtggacact ctgaacccac taacaatgtg ggatccattg ttgaacgact 180 ttcccaaatc agtgcatgga ttccggtgca tgttggcgat aaagtatttg caacaagttc 240 aagagaatta cccttctaat tctctagggt actcgtacct tacagggtta attcaggtat 300 tgcgcatccg gaatcatgcc aaagcggacc tacgatactg cattctctac cccgatatcg 360 aatgcacgga ggagattgaa cttcgatacc ccgctcatgc tgcctgcctc tgcgggaggt 420 gtccctacca acatgaaaag gaggcgttgg accaaccgcc ccatgtggag gaaacctcgg 480 ttttaccgac tgtataggtc ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt 540 caatcatttg agcaaaggca tgatattgcc cacacaggca aagtgatttg catatcggac 600 gtgactagag gtaatggaat tacacatcgt attggcaaac gtttttgcat caagtccgtg 660 tacattactg ggaaggtttg gatggacgaa aacattaagt ccaaaaatca cacgaatact 720 gtgatgttca agttatgtcg tgacagacga ccatttggta cacccatgga tttcggtcaa 780 gtgttcaaca tgtatgacaa cgagcccagt acagctactg tgaagaacga tctgcgtgat 840 cgttatcaag tcttgcgaaa gtttagtgcc actgttacgg gtggccaata tgcttgtaaa 900 gaacaagcca tggtgaatcg tttcttcaag gttaataatt atgttgttta caaccaccag 960 gaggcagcga agtatgagaa ccatactgag aacgcattat tattgtacat ggcatgtact 1020 catgcctcaa atcctgtgta tgcaacactt aaaattcgga tctattttta tgattcgata 1080 ttgaattaat aaagattgta ttgaacatta tgcgtaaagc ttacatcctc cactaagtgg 1140 agtttattgt acaggaaatc cgatgcgaaa tataaaatat ttgctaagct aatgacccct 1200 aaattattta aaaacttaaa taattggtcg cggaagatcg ataagatcat cccagaagtc 1260 gccttcatat aatggtagag cttcaagtcc aggaagcact tgtgcatccc cagtgctatc 1320 ttcaacctgt ggttgaacat tattcgcagc ttggtgacca tcattctgga ctctgctaga 1380 attggactgt ggtgcatgat cttgaaagag aggggatttt gcacctccca gatatagacg 1440 ccattcctga gttgagctgc agtgatgctc tcccctgtgc gaaaatccat agttacggca 1500 gttgatatgg atgtaatagc tacacccaca cttcaggtca attcgagatc gtcgaattgc 1560 tctcttcttg gcgaccctgt gttgaacctt gattgacggt ggagaacagt ggttctttga 1620 gggtgtagaa ttccgcattc tttgaagccc actgtttaag cgcagcattg ttctcttcat 1680 ccaagtactc ttataggagg acttgggacc agggttacac agaaagatgg tggggatacc 1740 acctttaatt ttagtgggct tcccgtactt gacgttagac tgccagtctc tttgcgcgcc 1800 catgaattct ttgaaatgtt tcaaataatg tggatcaacg tcatcgatga cgttgtacca 1860 tgcctcgtta gagtatgttt tgtcgtttag atctaaatgg ccgcaaagat aattatgagg 1920 acctatggca cgtgcccaca tggttttacc cgtgcgacta tctccttcaa taactatact 1980 aataggtcta tctggccgcg cagcgggatc tctcacattt ctttcagccc atgaagaaat 2040 gtagcttgga accttgtcga atgactctaa tgtaaaaggc gactcatatg cctgtgtagg 2100 ctctgtgaat atccgagaca aattacaatt taagttatga aattgtaaaa tgaaatcctt 2160 aggagccttt tccttcaata taaggagggc ctccaacttt gatccagagt tgagtgcctc 2220 ggcgtatgcg tcgttggcag attgttgacc tcctctagct gatctgccat cgatttggaa 2280 ggttccatga tcaagaatgt ctccgtcttt ctccatgtat gttttaacat ctgagcagct 2340 tttagctgcc tgaatgttcg gatggtaata tgccgatctg catctggaat ggaggtcgaa 2400 gaacctttgg tttttcgttt gttgtttccc ttcgaactga agcagaacat ggagatgagg 2460 ttgtccatct tcatgtagtt ctcgacagat gcggatgaac ttcttgttaa ctggtgttga 2520 caaggctaga agttgttcaa gagcgtcctc ctttgtaaga ggacatttgg gatatgtcaa 2580 gaaatagttt tttgcgttta tagcaaaacg accttccctt ggcatatttg aagtcgtttt 2640 tgtatcggtg tacaccgatt acttctctat cccctatcgg tgtatcggtg tcttatatat 2700 actagagcta ctaaaagccc ataggggcac tcagctataa tatt 2744 //