ID   DQ399550; SV 1; linear; genomic RNA; STD; VRL; 2179 BP.
XX
AC   DQ399550;
XX
DT   11-MAR-2006 (Rel. 87, Created)
DT   11-MAR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Cucumber mosaic virus strain BX segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2179
RA   Zhang H., Chen J.;
RT   "The complete nucleotide sequence of the genome RNA of a new Cucumber
RT   mosaic virus isolate from Pinellia ternata (Thunb.) in China";
RL   Unpublished.
XX
RN   [2]
RP   1-2179
RA   Zhang H., Chen J.;
RT   ;
RL   Submitted (12-FEB-2006) to the INSDC.
RL   Biological Science, Institute of Molecular Microbiology, Zhejiang
RL   University, Kaixuan Road 268#, Hangzhou, Zhejiang 310029, China
XX
DR   MD5; 869b121326e179010740c65f68f777c0.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2179
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Pinellia ternata"
FT                   /strain="BX"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /note="subgroup: I"
FT                   /db_xref="taxon:12305"
FT   CDS             98..937
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q20A30"
FT                   /protein_id="ABD64221.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGNIASFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVALHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYTGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPYNRLAEQSKPSAVARLLK
FT                   SQLNNIESSRYVLPYAKINQNARSESEELNVESPPVAIGSSSASRSETFRPEVVNGL"
FT   CDS             1232..1888
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q20A29"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q20A29"
FT                   /protein_id="ABD64220.1"
FT                   /translation="MDKSESPSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTPITLKPPKIDRGSYYGKRLVLPDSVTDFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALESDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2179 BP; 500 A; 526 C; 533 G; 620 T; 0 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gtgtgtcgcg tcgtgtcgag tcgtgctgtc        60
     cgcacattta tcattagtgt gttagaatac ccgaggcatg gctttccaag gtaccagtag       120
     gactttgact caacagtcct cagcggcaac gtctgacgag cttcagaaga tattgttcag       180
     ccctgatgcc attaagaaaa tggctactga gtgtgaccta ggtcgacatc attggatgcg       240
     cgctgataac gccatctctg tccgacccct cgttcccgaa gtaacccatg gtaacattgc       300
     gtccttcttt aagtctggat atgatgccgg tgaattgcgt tctaaaggat acatgagtgt       360
     ccctcaggta ttgtgtgccg ttactcgaac ggtttccact gacgccgaag ggtctctgag       420
     aatttacctg gctgatttag gcgacaagga gttatctcct atagatggac aatgtgttgc       480
     tttacataac catgatcttc ccgctttagt gtctttccaa ccgacgtatg attgtcctat       540
     ggagacagtt gggaatcgta agcggtgttt tgctgtcgtc attgagagac atggttatac       600
     cgggtatacc ggcaccacag ccagcgtgtg tagtaattgg caagctcggt tctcttccaa       660
     gaacaataac tacactcata tcgcggctgg gaagactcta gtactgccat acaacagatt       720
     agctgagcaa tcaaaaccgt cagcggtggc tcgcctgttg aagtcgcaat tgaacaacat       780
     agaatcctct cgctacgttt taccgtatgc gaagattaat caaaatgcgc gcagtgagtc       840
     cgaggaattg aatgttgaaa gccctcctgt cgcaatcggg agttcttccg cgtcccgctc       900
     cgaaaccttc agaccggaag tggttaacgg tctttagtat tttcggtgcg tattagtata       960
     cgtgtaagtg tctgtctgta catattaccg tatctatggt gtcctgtgtg agtcgtgaca      1020
     gtagacaacc gtgacgcgac gtcgtgttga gaagggaaca catctggttc tagtaagtcc      1080
     acatcacagc tttgaggttc aattcctctt gctccctgtt gggcccctta ctttttcatg      1140
     gatgcttctc cacgaaattg cgttctgtct actgaaagtg ggtgagtgtg tgtgttatat      1200
     cactttcttt ctcgtagagt ctagtcgagt tatggacaaa tctgaatcac ccagcgccgg      1260
     tcgtaaccgt cgacgtcgtc cgcgtcgtgg ttcccgctcc gcgtcctcct ccgcggatgc      1320
     taactttcga gtcttgtcgc aacaactttc gcgactcaat aagacgttag cagctggtcg      1380
     tccaactatt aaccacccaa cctttgttgg tagtgaacgt tgtaaacctg gttacacgtt      1440
     cacacctatt accttgaagc caccaaaaat agaccgtggg tcttattatg gtaaaaggtt      1500
     ggtattgcct gattcagtca cggatttcga taagaaactt gtttcgcgca tacaaattcg      1560
     agttaatcct ttgccgaaat ttgattctac cgtgtgggtg acggtccgga aagttcctgc      1620
     ctcctcggac ctatccgttg ctgccatctc agctatgttt gcagacggag cctcaccggt      1680
     actggtctat cagtacgcag catccggggt ccaagccaat aataaattat tgtacgacct      1740
     ttcagcgatg cgcgctgata ttggcgacat gagaaagtac gccgtcctcg tgtattcaaa      1800
     agacgatgcg cttgagtcag acgagttagt acttcatgtc gacattgagc accaacgcat      1860
     tcccacatct ggcgtgctcc cagtttgaat ccgtgttcca ggacccaccc tcctttgtct      1920
     ggcgggtgct gagttggcag tgttgttaca aactgtctga agtcactata tgtgaacggg      1980
     ttgtccatcc agcttgcggc taaaatggtc agtcgtggag aaatccacgc cagcagattt      2040
     acaaatctct gaggcgcctt tgaaaccgac tcctgggttt cttcggaagg acttcggtcc      2100
     gtgtacttct agcacaagat gctagtgtag ggtacgggtg cccccattat tatttaatgg      2160
     gttcctgaga aggagacca                                                   2179
//