ID DQ388880; SV 1; linear; genomic RNA; STD; VRL; 5403 BP. XX AC DQ388880; XX DT 03-JAN-2007 (Rel. 90, Created) DT 12-OCT-2009 (Rel. 102, Last updated, Version 6) XX DE Tomato torrado virus segment RNA2, complete sequence. XX KW . XX OS Tomato torrado virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Torradovirus. XX RN [1] RP 1-5403 RA Van den Heuvel J.F.J.M., Maris P.C., Verbeek M., Dullemans A.M., RA Van der Vlugt R.A.A.; RT "Plant virus designated Tomato torrado virus"; RL Unpublished. XX RN [2] RP 1-5403 RX DOI; 10.1007/s00705-006-0917-6. RX PUBMED; 17226066. RA Verbeek M., Dullemans A.M., van den Heuvel J.F., Maris P.C., RA van der Vlugt R.A.; RT "Identification and characterisation of tomato torrado virus, a new plant RT picorna-like virus from tomato"; RL Arch. Virol. 152(5):881-890(2007). XX RN [3] RP 1-5403 RA Verbeek M., Dullemans A.M., Van der Vlugt R.A.A.; RT ; RL Submitted (06-FEB-2006) to the INSDC. RL Biointeractions and Plant Health, Plant Research International, P.O. Box RL 69, Wageningen NL-6700AB, The Netherlands XX DR MD5; 20439a2d3b471d2f7ac748104dbb6d7c. DR EuropePMC; PMC2880234; 20376682. XX FH Key Location/Qualifiers FH FT source 1..5403 FT /organism="Tomato torrado virus" FT /segment="RNA2" FT /lab_host="N.glutinosa and N.benthamiana" FT /isolate="PRI-ToTV0301" FT /mol_type="genomic RNA" FT /country="Spain" FT /collection_date="2003" FT /db_xref="taxon:370833" FT /culture_collection="DSM:16999" FT 5'UTR 1..181 FT CDS 182..745 FT /codon_start=1 FT /product="Orf1" FT /db_xref="UniProtKB/Swiss-Prot:A1XIQ0" FT /protein_id="ABD38935.1" FT /translation="MSFISRLNTSLEEEAFHKQVADSQWVCSVDTGSGIINSDPTLDFK FT ICPKTGGAISVLSVSWQNNSPQLVPGHYLLRSGTWPITGVKLSGLLVHRSIRLETTRKL FT LEAQRISVSQQASSSSAAGAAGKQPQVTLTQLQEELDEAKTRLALKEKELLEALSEISK FT LRLQLSNQLSNDDVFSGWTEEGPK" FT CDS 702..4298 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:A1XIQ1" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/Swiss-Prot:A1XIQ1" FT /protein_id="ABD38936.1" FT /translation="MMMSSVAGQRKGPSDKSAAVSEQLIAQITAAVEAGNKNLLRKLGM FT GSYGILYGAQEKKAMELFDPEDVHNITSLWSSFKKTFTSSRDHGNLFFHLYGVMFFMVP FT HVHGGEGSVKISLCSSNDPTNPVLQEKVLYFSGGAQAVLMSPTITLPFVKRGPMFYYTM FT ECLGTRAQIPCSVVAIWKQKIDIRSAIYSKQETMSWAIEALHRPQFFQDRQEAAQYISS FT VYSNATSSATDSVLPFVGAQLGDTKMNVPSEARMIRSSSLRVPMLKVQSKRFSSMEIPS FT TSTAHLLGTTRDETVIQEESRYEEEGDDGVLFPVKKAQGLNYSHVWDNLGIESFVDVEL FT PENWDELSVRQQVAAAMIAFANKGVCLVPKHIINRDKHNIHLENITEHNYLVILERYGI FT VNAGSLARTENWYNLTLAQRVEELIYQRDDAYFMFGDNTNPYPPFDCYDGLTLKVRSEL FT ERVAKEQARQRFYKEAARAQVKNKVAQTSVEEIPSTSFATKVAMESGSVDSMKIAIQAE FT AANEAVRPNEVMFEFGQEMNNEGATELELQQPACVASNSFFNVGVFEFAWKKSSSVAAE FT VLSLALPAALFGKSKEMSMGSQMLRYYDAALIMYKVILYISGMGAISGQLALVWDECNV FT LNRKKEFINIASLYASKHRLVSASEQSSGEFCFTPTGIGKFVPLDPASGAYDLGSIRVF FT VTHPLASATELESIPCHIHLQCKVLSTNIMQPPRLRAQAQFGMKPDQTHFPRFPTNQVL FT LHYNWGVAASMGTTLVSIFSPSGIYESDGTLQPSLLGNIARNCKWWTGTCVFEICIEKT FT QFHSGSLAIGLGTLNTSMSTPHDILNMPHVICNLEMGRKFYFRCTITNWNGKNLLTTGR FT KSSLPRPKHMSHMRLFATVLKPLVSTSIHLDTVGVTVQLKCIEDLVLGGTVSVKPIYGH FT WTKGKNAVDFLFSEMDLSQRKEIEKLRKENVETFDEKGKKQPQVQVPLRDKFSYGAVQY FT FVMNWKDEERLLVLPCAPWSVRFPQGALVQEAITCPFIDWCSSFCYWSGSLEYTIIVHR FT VQTSNNIGGVLNITLDSSGYPFPLGISKGTYVVSAGGGAKWAFTYGMSDNIFSFVVHDD FT EFFPRRHTKARAIDPNASRIMTLQDRLGNLIINLPAKDVISSLEILVKPGPDFKLQLAQ FT APSANHEKHLGDMQTHTYLYTPDFSELRSFEN" FT mat_peptide <1485..>1502 FT /product="movement protein" FT /note="LxxPxL" FT mat_peptide <2148..>2885 FT /product="coat protein Vp35" FT mat_peptide <2898..>3608 FT /product="coat protein Vp26" FT mat_peptide <3645..>4295 FT /product="coat protein Vp23" FT 3'UTR 4299..5403 XX SQ Sequence 5403 BP; 1497 A; 1106 C; 1273 G; 1527 T; 0 other; tttaaaagaa taattttata caatatttat gtgatccaag ccatcacgga acctacgtcg 60 ttcctaagat attgtatcaa ttatctttgc tgttaccatt ttgagtgcac cgtcaactga 120 aggaacctac gccgtttcca aggacagtgt atcttttgtt atttattttg gttacatctc 180 tatgtcattt atttctcgtt tgaatacatc tcttgaagag gaggcatttc acaagcaagt 240 tgcagactct cagtgggtgt gttcggttga tacaggctct ggcataataa acagtgatcc 300 aactctagac ttcaagattt gtcccaagac aggtggagca atttctgttc tatctgtttc 360 gtggcaaaac aatagccctc aactggttcc tggtcattat ttactgcgaa gtggaacttg 420 gccaattact ggcgttaagc tatctggctt actagttcat agatcaattc gtttggaaac 480 caccagaaaa cttctagaag ctcagaggat ttctgtatcc cagcaagcat cttcttcctc 540 cgctgctggt gctgcaggaa aacaaccaca agtaacgctt acacaattac aagaggagct 600 tgacgaggcc aaaactcgct tagctctcaa agagaaagag ttacttgaag ctctatccga 660 aatatccaaa ttaagattgc aattgtccaa ccaactaagt aatgatgatg tcttcagtgg 720 ctggacagag gaagggccca agtgataaaa gtgcagctgt atctgagcaa ttaattgctc 780 agattacagc tgcagttgaa gcaggcaaca aaaacctgct tcgcaaactg ggcatgggtt 840 catatgggat tctctatggc gcccaagaga agaaagccat ggaactgttt gaccctgagg 900 atgtacataa tataacctca ttgtggtctt catttaagaa aactttcact tcctcgaggg 960 atcatggaaa tctattcttc catttgtatg gagttatgtt tttcatggtt cctcatgtac 1020 atggtgggga aggtagtgta aaaattagtt tatgttccag taatgatcca accaatcctg 1080 ttctgcagga gaaggttttg tatttttccg ggggggcaca ggcagtgtta atgagtccga 1140 ccattacact accttttgtt aaaagaggcc ccatgttcta ctacacaatg gagtgccttg 1200 gcactcgggc tcaaattcct tgctcagtag tggccatttg gaaacaaaag attgatatcc 1260 gtagtgccat ttactcaaag caggaaacaa tgtcttgggc tattgaggct cttcaccgac 1320 ctcaattttt ccaggataga caggaggcag cacagtacat atcatcagta tattctaatg 1380 ctacctcctc agcaactgat tcagtgcttc cgtttgtggg agcacagctt ggcgacacaa 1440 agatgaatgt gccaagcgaa gcaagaatga tccggtcctc ctcgctccgg gtgcccatgc 1500 tcaaggtgca gagtaagcgg ttttcctcaa tggaaatacc atctacctca actgcacacc 1560 tccttggcac aacgcgtgat gaaactgtaa tacaggagga aagtaggtac gaagaggagg 1620 gtgatgatgg ggttttgttc cccgttaaaa aggctcaagg tctgaactat tcccatgtgt 1680 gggataatct tggtattgag tcctttgtag atgttgagct gcccgaaaac tgggatgagc 1740 tgtcggtgag acagcaagtt gctgcagcaa tgatagcatt tgcaaacaag ggtgtttgct 1800 tggtcccaaa acatataatc aaccgggaca agcacaatat ccacttggag aatatcaccg 1860 agcacaacta cttggtgata ctggaaaggt acggcattgt gaatgccggc tctctggcca 1920 gaactgaaaa ctggtacaat cttaccttgg cacagagagt ggaagagcta atttatcaaa 1980 gggacgatgc atatttcatg tttggtgata acaccaaccc atatcctccc tttgattgtt 2040 atgatggctt aacgctcaaa gttcgcagtg agctagagcg tgtggcaaag gagcaggcgc 2100 gccaaagatt ttacaaggag gcggccaggg ctcaggtgaa aaacaaggtg gcccaaacta 2160 gtgtggaaga aataccatcc acctcattcg ccacaaaggt tgccatggag agtggcagtg 2220 tggatagcat gaaaattgct attcaagctg aagctgccaa tgaagctgta aggcccaatg 2280 aagttatgtt tgaatttggg caagaaatga ataatgaagg tgcgacagag ctggaattac 2340 aacaaccagc ctgcgtggcc agtaactcct tcttcaatgt tggagttttt gagtttgcat 2400 ggaagaaaag cagttctgtt gctgctgagg tgctatcact ggcgctccct gcggctctct 2460 ttggtaaatc caaggagatg tcaatgggat cgcaaatgct aaggtattat gatgccgcat 2520 taattatgta caaggtcatc ttgtatattt ccggcatggg tgcaatttcg ggtcagctgg 2580 ccctggtttg ggatgagtgc aatgtgctca acagaaagaa ggagttcatc aacattgcct 2640 ctctgtatgc cagcaaacat aggctggttt cagcatctga acagagtagt ggggaatttt 2700 gttttacacc tacgggtatc ggcaaattcg ttccacttga tccagcctcg ggggcttatg 2760 atctgggtag catacgggtg tttgtgacgc accccttggc tagtgctact gaattggaga 2820 gcataccttg tcacatccat ctgcagtgta aagtgttgtc gaccaacatc atgcagcctc 2880 ctcgtttgcg agcacaggca caatttggta tgaaaccaga ccagacacac tttccacgat 2940 ttccaacaaa tcaggtactg ttacactaca attggggagt ggctgctagc atgggtacta 3000 ccttagttag catcttctct ccgtcaggca tatatgaaag tgacggtacg ctgcaaccat 3060 ccttgcttgg aaacatagca cgcaattgca aatggtggac tggcacttgc gtgtttgaga 3120 tttgtattga gaagactcag ttccattctg gtagtttggc cattggactg ggtacactga 3180 acacaagcat gtccacccct catgacattt taaatatgcc gcatgttatt tgtaaccttg 3240 agatgggacg aaagttctat ttcaggtgta cgataaccaa ttggaatggg aaaaatcttt 3300 tgaccactgg tcggaagagt tctctaccgc ggcccaagca tatgtctcac atgaggttgt 3360 ttgctacagt cttgaaaccc ctggtatcaa cttcaataca tctagatacg gtcggggtaa 3420 cagtgcagct taaatgcata gaagatttgg tccttggggg cactgtgtct gttaaaccca 3480 tttacggaca ctggactaaa ggaaagaatg ctgtggactt cctattctct gagatggact 3540 tgtctcagcg caaagaaatt gagaaattac gcaaggaaaa cgttgagaca tttgatgaga 3600 aaggaaagaa gcagccacag gtacaagtgc cgctcagaga caagttttca tatggggctg 3660 tacaatattt tgtgatgaat tggaaggacg aagagcgact gttggtttta ccatgcgcac 3720 cctggtccgt aagattccct cagggggcac tggtacagga ggccatcaca tgcccattca 3780 ttgattggtg ctcttccttc tgttattggt ctggaagtct tgaatacacc attattgtac 3840 atagagtgca gacttccaat aacataggag gagtgctgaa catcacctta gattcatcag 3900 ggtacccttt tcctcttgga atctcaaagg gcacctatgt tgtctctgct ggtggaggag 3960 caaaatgggc tttcacttat ggtatgagcg acaacatctt ttcttttgtg gtgcatgatg 4020 atgagttttt tcctagacgc cataccaaag ccagagcaat agatccaaat gcttcaagaa 4080 taatgactct gcaagatcga ctaggaaatc tcataataaa tttaccagcc aaagatgtga 4140 taagctctct ggaaatcttg gtcaagccag gacctgattt caaattgcaa ctggctcaag 4200 ctccttcagc aaatcatgag aagcatttgg gtgatatgca aacgcatacc tacctttata 4260 ctcctgattt ttcagaacta aggagttttg aaaattaact atcctgtacg tgatatagga 4320 gccgtgagtc cggcatgtga ctcatcatgt gcagttaaca tgtgtactgt gaataatgtt 4380 aactgtaagg atagttaatt ttaacggaga gtactgactt taactagttg ggagtccggc 4440 tccatttgga gtaccaatga atctacattg gttaaagaga tttgcacgcc tctctttaaa 4500 tatggatcgt gtaccctgct tggttagaaa gtacctttac ttaggtttac aaagtacggg 4560 gagcactccc tggttaacat agtgcaggtg ctatcccatg atagtccttt aactcaaggg 4620 ttgagttcgg tttgcatctt ttgccgtgat gaaagatgag gtagcttccc ccttattggg 4680 aggctgaaac tacacatatg tagtgggttt gactgagtcc tataatcagt ccgtttgaaa 4740 ttcgataatt ttccgtagct tgcgtcaagc tgctcacgtt aggggcgtga gtgaagatgc 4800 gccgtaccac gccttccccg gcaatgccag tggttcagag cgggccctca gaatagaggt 4860 taaaactagt gtgatggtgt atatcacgat aaaaagtgac acccgggttg tgctgcgcct 4920 agttaacacg agcacaggtc ccaccctata gtggaagaaa cttggttgag ttttaaagaa 4980 caacccgttt gagcgacgac aaagttccgt agcttgcgac aagctgtttg tgttaggggc 5040 acaaatgaag ttatagcaca ccacttcttc cctaggttcg tccagtggtt tcacagtgct 5100 atcctcagaa aagaggttaa atctagtgtg atggtgtata tcacgataaa gaatgacacc 5160 cgggatgtgc ttctcctagt taactcgagc acggttttca caccacagtg aaactatctt 5220 actgctttaa atgttgtttg tttgttttac ttgttttatt gagtgtttaa tatcatgcat 5280 atttgctgtt gaaggttctg tcgatgaggt caaatggata ctcgggaact acagtaactt 5340 tgcatttgaa ttgttttcaa ttcagtgtgt gagtttgaat atgtatttta aaaaaaaaaa 5400 aaa 5403 //