ID DQ376185; SV 1; linear; genomic RNA; STD; VRL; 2922 BP. XX AC DQ376185; XX DT 06-MAR-2006 (Rel. 87, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate VE427 nonstructural protein (NSs) and DE nucleocapsid (N) genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2922 RA Margaria P., Ciuffo M., Turina M.; RT "Molecular characterization of resistance-breaking strains of tomato RT spotted wilt virus (Tospovirus, Bunyaviridae) infecting resistant pepper RT carrying the TSW gene"; RL Unpublished. XX RN [2] RP 1-2922 RA Margaria P., Ciuffo M., Turina M.; RT ; RL Submitted (26-JAN-2006) to the INSDC. RL IVV, CNR, Strada Delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; 5048025207ab9e14add78a6397f2664f. XX FH Key Location/Qualifiers FH FT source 1..2922 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="VE427" FT /mol_type="genomic RNA" FT /country="Spain" FT /note="resistance-breaking strain able to infect pepper FT carrying the Tsw resistance gene" FT /db_xref="taxon:3052585" FT gene 86..1492 FT /gene="NSs" FT CDS 86..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /note="putative silencing suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q27U56" FT /protein_id="ABD38702.1" FT /translation="MMSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQT FT QLYSDSRSKSSFGYTAKVGDLPCEEEEILSQHVYIPIFDNIDFSINIDDSVLALSVCSN FT TVNANGVKHQGHLKVLSPAQLHSIGSIMNRSDITDRFQLQEKDIIPNDRYIEAANKGSL FT SCVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSL FT LMSAENNIMPNSQAFVKASTDSHFKLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLS FT IACIPNHNSVETALNITVICKHQLPIRKCKAPFELSMMFSDLKEPYNIVHDPSYPQRIV FT HALLETHTSFAQVLCNNLQEDVIIYTLNNHELTSGKLDLGERTLNYSEDAYKRKYFLSK FT TLECLPSNIQTMSYLDSIQIPSWKIDFARGEIKISPQSISVAKSLLKLDLSGIKKKESK FT IKEAYASGSK" FT gene complement(1995..2771) FT /gene="N" FT CDS complement(1995..2771) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid" FT /db_xref="GOA:Q5XP42" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q5XP42" FT /protein_id="ABD38703.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA" XX SQ Sequence 2922 BP; 925 A; 550 C; 472 G; 975 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccatgat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcacgaa cttggtactg gttctcaact agttcagacc cagctgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa agtaggggat cttccttgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgataat attgatttta gcatcaatat 360 tgatgactct gttctggcac tatctgtttg ctcaaataca gtcaatgcta acggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgctcagctc cactctattg gatctatcat 480 gaacagatct gatattacag accgattcca gctccaagaa aaagacataa ttcctaatga 540 cagatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttagg caaagtgaat gttctatctc ctaacagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtgaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaagctga gcctctggct 840 aagggttcca aaggttttga agcagatttc cattcagaaa ttgttcaaag tcgcaggaga 900 tgagacaaat aaaacatttt atttatctat tgcctgcatt ccaaaccata acagtgttga 960 gacagcttta aacattactg ttatttgcaa gcatcagctt ccaattcgta aatgtaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat ccccaaagga ttgttcatgc tttgcttgaa actcacacat cttttgcaca 1140 ggttctttgc aacaacttgc aagaagatgt gatcatctac accttgaaca accatgagct 1200 aacttctgga aagctagatt taggtgaaag aaccttgaat tacagtgaag atgcctacaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacatac aaactatgtc 1320 ttatttagac agcatccaaa ttccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctccg caatctattt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaga ttaaggaagc atatgcttca ggatcaaaat gatcttgcta 1500 tgtccagctt ttcctaatta tgttatgttt gttttctttc tttacttata attattcctc 1560 tgtttgtcat ttctttcaaa ttcctcctgt ctagtagaaa ccataaaaac aaaaataaaa 1620 ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaaacaa caaaaaaata 1680 aaaaacaaaa aaccaaaaaa gatcccgaaa gggacaattt tggccaaatt tgggttttgt 1740 ttttgttttt tgttttttgt tttttgtttt tatttttatt tatttatttt tattttattt 1800 attttatttt tgtttttatt ttatgttttt tgttgttttt gttattttgt tatttattaa 1860 gcacaacaca cagaaagcaa actttaatta aacacactta tttaaaattt aacacactaa 1920 gcaagcacaa gcaataaaga taaagaaagc tttatatatt tataggcttt ttataattta 1980 acttacagct gcttttaagc aagttctgtg agtttcgcct gttttttaac cccaaacatt 2040 tcatagaact tgttaagagt ttcactgtaa tgttccatag caatacttcc tttagcatta 2100 ggattgctgg agctaagtat agcagcatac tctttcccct tcttcacctg atcttcattc 2160 atctcaaatg ctttgctttt cagcacagtg caaacttttc ctaaagcttc cctggtgtca 2220 tacttctttg ggtcgatccc gaggtccttg tattttgcat cctgatatat agccaagaca 2280 acactgatca tctcaaagct atcaactgaa gcaataagag gtaagctacc tcccagcatt 2340 atggcaagcc tcacagactt tgcatcatca agaggtaatc cataagcttg aatcaaaggg 2400 tgggaagcaa tcttagattt gatagtattg agattctcag aattcccagt ttcctcaaca 2460 agcctgaccc tgatcaagct atcaagcctt ctgaaggtca tgtcagtggc tccaatcctg 2520 tctgaagttt tctttatggt aattttacca aaagtaaaat cactctgctt aataaccttc 2580 attatgctct gacgattctt caggaatgtc agacatgaaa taacgctcat ctttttgatc 2640 tggtcaaggt tttccagaca aaaagtcttg aagttgaatg ctaccagatt ctgatcttcc 2700 tcaaactcaa ggtctttgcc ttgtgtcaac aaagcaacaa tgctttcctt agtgagctta 2760 accttagaca tgatgatcgt agaagttgtt atatgctctg accgtatgtg attcaaggtg 2820 caaaagtgca actctgtatc ccgcagtcgt ttcttagggt tttaatgtga tgatttgtaa 2880 gactgagtgt taaggtttga ataaaattga cacaattgct ct 2922 //