ID DQ376183; SV 1; linear; genomic RNA; STD; VRL; 2926 BP. XX AC DQ376183; XX DT 06-MAR-2006 (Rel. 87, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate P105-44.7 nonstructural protein (NSs) and DE nucleocapsid (N) genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2926 RA Margaria P., Ciuffo M., Turina M.; RT "Molecular characterization of resistance-breaking strains of tomato RT spotted wilt virus (Tospovirus, Bunyaviridae) infecting resistant pepper RT carrying the TSW gene"; RL Unpublished. XX RN [2] RP 1-2926 RA Margaria P., Ciuffo M., Turina M.; RT ; RL Submitted (25-JAN-2006) to the INSDC. RL IVV, CNR, Strada Delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; edcd81fef8c686a9a8814ccb94fd41b8. XX FH Key Location/Qualifiers FH FT source 1..2926 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="P105-44.7" FT /mol_type="genomic RNA" FT /country="Italy" FT /note="resistance-breaking strain" FT /db_xref="taxon:3052585" FT gene 89..1492 FT /gene="NSs" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /note="putative silencing suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q27U60" FT /protein_id="ABD38698.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQTQ FT LYSDSRSKSSFGYTAKVGDLPCEEEEILSQHLYIPIFDDIDFSINIDDSVLALSVCSNT FT VNANGVKHQGHLKVLSPAQLHSIGSIMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MLAENNIMPNSQAFVKASTDSHFRLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNYNSVETALNITVICKHQLPIRKFKAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNHELTPGKLDLGEKTLNYSEDAYKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSISVAKSLLKLDLSGIKKKESKI FT KEAHASGSK" FT gene complement(1999..2775) FT /gene="N" FT CDS complement(1999..2775) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="ABD38699.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2926 BP; 926 A; 547 C; 468 G; 985 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctcaact agttcagacc caactgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa agtaggggat cttccttgtg aagaagaaga 300 gattctttct cagcatttgt atatccctat ttttgatgat attgatttta gcatcaatat 360 tgatgactct gttctggcat tatctgtttg ctcaaataca gtcaatgcta atggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgctcagctc cactctattg gatctatcat 480 gaacagatct gatattacgg atcgattcca gctccaagaa aaagatataa ttcccaatga 540 cagatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttagg caaagtgaat gttctatctc ctaatagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtgaat tctcttgcag tgaaatctct gctcatgtta gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaggctga gcctctggct 840 aagggttcca aaggttttga agcagatttc cattcagaaa ttgttcaagg ttgcaggaga 900 tgaaacaaat aaaacatttt atttatctat tgcctgcatt ccaaactata acagtgttga 960 gacagcttta aacattactg ttatttgcaa acatcagctc ccaattcgta aatttaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat ccccaaagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac accttgaaca accatgagct 1200 aactcctgga aagttagatt taggtgaaaa aaccttgaat tacagtgaag atgcctacaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttatttagac agcatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctccg caatctattt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaga ttaaggaagc acatgcttca ggatcaaaat gatcttgctg 1500 tgtccagctt tttctaatta tgttatgttt attttcctcc tttacttata attatttctc 1560 tgtttgtcat ttctttcaaa ttcctcctgc ctagtagaaa ccataaaaac aaaaataaaa 1620 ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaacaac aaaaaattaa 1680 aaaacaaaaa accaaaaaag atcccgaaag ggacaatttt ggccaaattt gggttttgtt 1740 tttgtttttt gttttttgtt ttttgttttt tatttttatt ttttattttt attttacttt 1800 attttatttt tatttgtttt tattttatgt ttttttgttg gttttttatt atgttattta 1860 ttaagcacaa cacacagaaa gcaaacttta attaaacaca cttatttaaa atttaacaca 1920 ctaagcaagc acaagcaata aagataaaga aagctttata tatttatagg ttttttataa 1980 tttaacttac agctgctttt aagcaagttc tgcgagtttt gcctgttttt taaccccaaa 2040 catttcatag aacttgttaa gagtttcact gtaatgttcc atagcaatac ttcctttagc 2100 attaggattg ctggagctaa gtatagcagc atactctttc cccttcttca cctgatcttc 2160 attcatttca aatgctttgc ttttcagcac agtgcaaact ttccctaagg cttccctggt 2220 gtcatacttc tttgggtcga tcccaaggtc cttgtatttt gcatcctgat atatagccaa 2280 gacaacactg atcatctcaa agctatcgac tgaagcaata agaggtaagc tacctcccag 2340 cattatggca agcctcacag actttgcatc atcaagaggt aatccatagg cttgaatcaa 2400 agggtgggaa gcaatcttag atttgatagt attgagattc tcggaattcc cagtttcctc 2460 aacaagcctg accctgatca agctatcaag ccttctgaag gtcatgtcag tggctccaat 2520 cctgtctgaa gttttcttta tggtaatttt accaaaagta aaatcacttt gcttaataac 2580 cttcattatg ctctgacgat tcttcaggaa tgtcagacat gaaataacac tcatcttttt 2640 gatctggtca aggttttcca gacaaaaagt cttgaagttg aatgctacca gattctgatc 2700 ttcctcaaac tcaaggtctt tgccttgtgt caacaaagca acaatgcttt ccttagtgag 2760 cttaacctta gacatgatga tcgtagaagt tgttatatgc tttgaccgta tgtaactcaa 2820 ggtgcaaaag tacaactctg tatcccgcag tcgtttctta gggttttaat gtgatgattt 2880 gtaagactga gtgttaaggt ttgaataaaa ttgacacaat tgctct 2926 //