ID DQ376180; SV 1; linear; genomic RNA; STD; VRL; 2927 BP. XX AC DQ376180; XX DT 06-MAR-2006 (Rel. 87, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate P267 nonstructural protein (NSs) and DE nucleocapsid (N) genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2927 RA Margaria P., Ciuffo M., Turina M.; RT "Molecular characterization of resistance-breaking strains of tomato RT spotted wilt virus (Tospovirus, Bunyaviridae) infecting resistant pepper RT carrying the TSW gene"; RL Unpublished. XX RN [2] RP 1-2927 RA Margaria P., Ciuffo M., Turina M.; RT ; RL Submitted (25-JAN-2006) to the INSDC. RL IVV, CNR, Strada Delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; acba1fec6f3a3a73c735baeb26ade10f. XX FH Key Location/Qualifiers FH FT source 1..2927 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="P267" FT /mol_type="genomic RNA" FT /country="Italy" FT /isolation_source="open field epidemic in Italian Riviera" FT /note="resistance-breaking strain" FT /db_xref="taxon:3052585" FT gene 89..1492 FT /gene="NSs" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /note="putative silencing suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q27U66" FT /protein_id="ABD38692.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQTQ FT LYSDSRSKSSFGYTAKVGDLPCEEEEILSQHVYIPIFDVIDFSINIDDSVLALSVCSNT FT VNANGVKHQGHLKVLSPAQLHSIGSIMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFRLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNYNSVETALNITVICKHQLPIRKFKAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNHELTPGKLDLGEKTLNYSEDAYKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSVSVAKSLLKLDLSGIKKKESKI FT KEAHASGSK" FT gene complement(2000..2776) FT /gene="N" FT CDS complement(2000..2776) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="ABD38693.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2927 BP; 924 A; 547 C; 470 G; 986 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctcaact agttcagacc caactgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa agtaggggat cttccttgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgtt attgatttta gcatcaatat 360 tgatgactct gttctggcat tatctgtttg ctcaaataca gtcaatgcta atggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgctcagctc cactctattg gatctatcat 480 gaacagatct gatattacgg atcgattcca gctccaagaa aaagatataa ttcccaatga 540 cagatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttagg caaagtgaat gttctatctc ctaatagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtgaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaggctga gcctctggct 840 aagggttcca aaggttttga agcagatttc cattcagaaa ttgttcaagg ttgcaggaga 900 tgaaacaaat aaaacatttt atttatctat tgcctgcatt ccaaactata acagtgttga 960 gacagcttta aacattactg ttatttgcaa acatcagctc ccaattcgta aatttaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat ccccaaagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac accttgaaca accatgagct 1200 aactcctgga aagttagatt taggtgaaaa aaccttgaat tacagtgaag atgcctacaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttatttagac agcatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctccg caatctgttt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaaa ttaaggaagc acatgcttca ggatcaaaat gatcttgctg 1500 tgtccagctt tttctaatta tgttatgttt attttcctcc tttacttata attatttctc 1560 tgtttgtcat ttctttcgaa ttcctcctgc ctagtagaaa ccataaaaac aaaaatgaaa 1620 ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaaacaa caaaaaatta 1680 aaaaacaaaa aaccaaaaaa gatcccgaaa gggacaattt tggccaaatt tgggttttgt 1740 ttttgttttt tgttttttgt tttttgtttt ttatttttat tttttatttt ttattttatt 1800 ttattttatt ttatttgttt ttattttatg ttttttgttg gtttttttat tatgttattt 1860 attaagcaca acacacagaa agcaaacttt aattaaacac acttatttaa aatttaacac 1920 actaagcaag cacaagcaat aaagataaag aaagctttat atatttatag gttttttata 1980 atttaactta cagctgcttt taagcaagtt ctgcaagttt tgcctgtttt ttaaccccaa 2040 acatttcata gaacttgtta agagtttcac tgtaatgttc catagcaata cttcctttag 2100 cattaggatt gctggagcta agtatagcag catactcttt ccccttcttc acctgatctt 2160 cattcatttc aaatgctttg cttttcagca cagtgcaaac tttccctaag gcttccctgg 2220 tgtcatactt ctttgggtcg atcccaaggt ccttgtattt tgcatcctga tatatagcca 2280 agacaacact gatcatctca aagctatcga ctgaagcaat aagaggtaag ctacctccca 2340 gcattatggc aagcctcaca gactttgcat catcaagagg taatccatag gcttgaatca 2400 aagggtggga agcaatctta gatttgatag tattgagatt ctcggaattc ccagtttcct 2460 caacaagcct gaccctgatc aagctatcaa gccttctgaa ggtcatgtct gtggctccaa 2520 tcctgtctga agttttcttt atggtaattt taccaaaagt aaaatcactt tgcttaataa 2580 ccttcattat gctctgacga ttcttcagga atgtcagaca tgaaataaca ctcatctttt 2640 tgatctggtc aaggttttcc agacaaaaag tcttgaagtt gaatgctacc agattctgat 2700 cttcctcaaa ctcaaggtct ttgccttgtg tcaacaaagc aacaatgctt tccttagtga 2760 gcttaacctt agacatgatg atcgtagaag ttgttatatg ctttgaccgt atgtaactca 2820 aggtgcaaaa gtacaactct gtatcccgca gtcgtttctt agggttttaa tgtgatgatt 2880 tgtaagactg agtgttaagg tttgaataaa attgacacaa ttgctct 2927 //