ID DQ376179; SV 1; linear; genomic RNA; STD; VRL; 2925 BP. XX AC DQ376179; XX DT 06-MAR-2006 (Rel. 87, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate P166 nonstructural protein (NSs) and DE nucleocapsid (N) genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2925 RA Margaria P., Ciuffo M., Turina M.; RT "Molecular characterization of resistance-breaking strains of tomato RT spotted wilt virus (Tospovirus, Bunyaviridae) infecting resistant pepper RT carrying the TSW gene"; RL Unpublished. XX RN [2] RP 1-2925 RA Margaria P., Ciuffo M., Turina M.; RT ; RL Submitted (25-JAN-2006) to the INSDC. RL IVV, CNR, Strada Delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; 8a9c3864ba5139e7e7b376985ac83023. XX FH Key Location/Qualifiers FH FT source 1..2925 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="P166" FT /mol_type="genomic RNA" FT /country="Italy" FT /note="resistance-breaking strain on Capsicum chinense FT PI152225" FT /db_xref="taxon:3052585" FT gene 89..1492 FT /gene="NSs" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /note="putative silencing suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q27U68" FT /protein_id="ABD38690.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQTQ FT LYSDSRSKSSFGYTAKVGDLPCEEEEILSQHVYIPIFDDIDFSINIDDSVLALSVCSNT FT VNANGVKHQGHLKVLSPAQLHSIGSIMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFRLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNYNSVETALNITVICKHQLPIRKFKAPLELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNHELTPGKLDLGEKTLNYSEDAYKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSISVAKSLLKLDLSGIKKKESKI FT KEAHASGSK" FT gene complement(1998..2774) FT /gene="N" FT CDS complement(1998..2774) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="ABD38691.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2925 BP; 927 A; 550 C; 469 G; 979 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctcaact agttcagacc caactgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa agtaggggat cttccttgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcatcaatat 360 tgatgactct gttctggcat tatctgtttg ctcaaataca gtcaatgcta atggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgctcagctc cactctattg gatctatcat 480 gaacagatct gatattacgg atcgattcca gctccaagaa aaagatataa ttcccaatga 540 cagatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttagg caaagtgaat gttctatctc ctaatagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtgaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaggctga gcctctggct 840 aagggttcca aaggttttga agcagatttc cattcagaaa ttgttcaagg ttgcaggaga 900 tgaaacaaat aaaacatttt atttatctat tgcctgcatt ccaaactata acagcgttga 960 gacagcttta aacattactg ttatttgcaa acatcagctc ccaattcgta aatttaaagc 1020 tcctcttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat ccccaaagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac accttgaaca accatgagct 1200 aactcctgga aagttagatt taggtgaaaa aaccttgaat tacagtgaag atgcctacaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttatttagac agtatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctccg caatctattt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaga ttaaggaagc acatgcttca ggatcaaaat gatcttgctg 1500 tgtccagctt tttctaatta tgttatgttt attttcctcc tttacttata attatttctc 1560 tgtttgtcat ttctttcaaa ttcctcctgc ctagtagaaa ccataaaaac aaaaataaaa 1620 ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaaacaa caaaaaaatt 1680 aaaaacaaaa aaccaaaaaa gatcccgaaa gggacaattt tggccaaatt tgggttttgt 1740 ttttgttttt tgttttttgt tttgttttta tttttatttt ttatttttta ttttacttta 1800 ttttattttt atttgttttt attttatgtt ttttgttggt ttttttatta tgttatttat 1860 taagcacaac acacagaaag caaactttaa ttaaacacac ttatttaaaa tttaacacac 1920 taagcaagca caagcaataa agataaagaa agctttatat atttataggt tttttataat 1980 ttaactcaca gctgctttta agcaagttct gcgagttttg cctgtttttt aaccccaaac 2040 atttcataga acttgttaag agtttcactg taatgttcca tagcaatact tcctttagca 2100 ttaggattgc tggagctaag tatagcagca tactctttcc ccttcttcac ctgatcttca 2160 ttcatttcaa atgctttgct tttcagcaca gtgcaaactt tccctaaggc ttccctggtg 2220 tcatacttct ttgggtcgat cccaaggtcc ttgtattttg catcctgata tatagccaag 2280 acaacactga tcatctcaaa gctatcgact gaagcaataa gaggtaagct acctcccagc 2340 attatggcaa gcctcacaga ctttgcatca tcaagaggta atccataggc ttgaatcaaa 2400 gggtgggaag caatcttaga tttgatagta ttgagattct cggaattccc agtttcctca 2460 acaagcctga ccctgatcaa gctatcaagc cttctgaagg tcatgtcagt ggctccaatc 2520 ctgtctgaag ttttctttat ggtaatttta ccaaaagtaa aatcactttg cttaataacc 2580 ttcattatgc tctgacgatt cttcaggaat gtcagacatg aaataacact catctttttg 2640 atctggtcaa ggttttccag acaaaaagtc ttgaagttga atgctaccag attctgatct 2700 tcctcaaact caaggtcttt gccttgtgtc aacaaagcaa caatgctttc cttagtgagc 2760 ttaaccttag acatgatgat cgtagaagtt gttatatgct ttgaccgtat gtaactcaag 2820 gtgcaaaagt acaactctgt atcccgcagt cgtttcttag ggttttaatg tgatgatttg 2880 taagactgag tgttaaggtt tgaataaaat tgacacaatt gctct 2925 //