ID   DQ369960; SV 1; linear; genomic RNA; STD; VRL; 2002 BP.
XX
AC   DQ369960;
XX
DT   07-FEB-2006 (Rel. 86, Created)
DT   06-SEP-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus isolate KhzL66 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2002
RA   Masumi M., Zare A., Izadpanah K.;
RT   "The partial nucleotide sequence of Sugarcane mosaic virus isolates from
RT   sugar cane in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-2002
RA   Masumi M., Zare A., Izadpanah K.;
RT   ;
RL   Submitted (15-JAN-2006) to the INSDC.
RL   Plant Virology Research Center, Shiraz University, Shiraz, Fars, Iran
XX
DR   MD5; 8ae0aec5e623bba5c33bd825a2353049.
DR   EuropePMC; PMC5461048; 28592948.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2002
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="sugarcane"
FT                   /strain="A"
FT                   /isolate="KhzL66"
FT                   /serotype="A"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..1770
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q2HXS1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q2HXS1"
FT                   /protein_id="ABC95178.1"
FT                   /translation="CDADGSQFDSSLTPYLINAVLHIRLQFMEEWELGAQMLRNLYTEI
FT                   VYTPIATPDGSIIKKFKGNNSGQPSTVVDNTLMVILAFNYAMLSSGIQDNEIDNCCRMF
FT                   ANGDDLLLAVHPDYEHILDGFQDHFGNLGLNFEFTSRTRDKSELWFMSTRGIKCEGIYI
FT                   PKLEKERIVAILEWDRSNLPEHRLEAICAAMVEAWGYSDLVYEIRKFYAWLLEMQPFAN
FT                   LAKEGLAPYIAETALRNLYLGSGIKEEEIEKYFKQFAKDLPGYLEDYNEEVFHQAGTVD
FT                   AGAQGGDGKAGTQPPATGAAAQGGAQPPATGAAAQPPATQGSQPPTGGATGGGGAQTGA
FT                   GETGSVIGGQKDKDVDAGTTGKITVPKLKAMSKKMRLPKAKGKDVLHLDFLLTYKPQQQ
FT                   DISNTRATREEFDRWYEAIKKEYEIDDTQMTVVMSGLMVWCIENGCSPNINGSWTMMDG
FT                   DEQRVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDYSLA
FT                   RYAFDFYEMNSRTPARAKEAHMQMKAAAVRGSNTRLFGLDGNVGETQENTERHTAGDVS
FT                   RNMHSLLGVQQHH"
FT   mat_peptide     <1..828
FT                   /product="NIb"
FT   mat_peptide     829..1767
FT                   /product="CP"
FT   3'UTR           1771..2002
XX
SQ   Sequence 2002 BP; 631 A; 418 C; 493 G; 460 T; 0 other;
     tgcgatgcgg atggttcaca atttgacagc tccctaacac cctatctcat aaatgccgtg        60
     ctacacattc gactacaatt tatggaggag tgggaactag gcgcacaaat gttacggaat       120
     ttgtatacgg agatcgtcta cacaccaatt gcaacgccag acggttccat aatcaagaaa       180
     tttaagggaa acaacagtgg tcagccatca actgtagttg acaacacgct aatggtcatc       240
     ttagcattca attatgcaat gttgtcaagt ggaatacaag acaatgaaat cgataactgt       300
     tgcaggatgt ttgctaatgg agatgatcta ctgttggcag tacatcccga ttatgaacat       360
     atactggacg gatttcaaga tcacttcgga aatctcggat taaattttga gtttacatca       420
     cgaacacgag ataaatccga attgtggttc atgtctacaa gaggaatcaa atgtgaagga       480
     atctacatac ctaaacttga gaaagaaaga atagtcgcaa tactcgaatg ggatcgatcg       540
     aatctacctg agcatagatt ggaagccatt tgtgcagcta tggttgaagc atggggctac       600
     tcagatcttg tttacgaaat tcggaaattt tatgcgtggc ttctggaaat gcaaccattt       660
     gcaaatctag ccaaagaggg tttagctcca tatatcgcag aaacagcgct tcgtaacttg       720
     tatctaggtt caggcatcaa ggaagaggaa atcgagaaat acttcaagca gtttgcaaag       780
     gacctccctg ggtatttaga ggattacaac gaagaagttt tccaccaagc tggaacagtc       840
     gatgcaggcg cgcaaggagg agatgggaaa gccggaactc agccgccagc cactggagca       900
     gcagctcaag gaggagctca accaccagca actggagcag ccgcgcaacc acccgcgact       960
     cagggttcac aaccgcccac agggggagcc actggtggag gtggtgcaca aacaggagct      1020
     ggtgaaactg gttcagttat aggaggtcaa aaagacaagg atgtagatgc tggtacgaca      1080
     ggcaaaatca cagtgccaaa acttaaagcc atgtcgaaga agatgcgctt gccaaaagca      1140
     aaaggaaaag atgttctgca tctggacttt ctgttaacat acaaaccgca acaacaagac      1200
     atatcaaaca caagagcaac cagagaggag tttgatagat ggtatgaagc cataaagaag      1260
     gagtatgaaa tagatgacac acaaatgaca gttgtcatga gtggtctaat ggtatggtgc      1320
     atcgaaaatg gttgctcgcc aaacataaac ggaagttgga caatgatgga tggagatgaa      1380
     caaagagtct ttccattaaa accagtcatt gaaaacgcat ctccaacatt ccggcaaata      1440
     atgcatcatt tcagtgatgc agctgaagca tacatcgagt atagaaactc tacagagcga      1500
     tacatgccac gatatggact tcagcgaaat ctcaccgact atagcttagc gcggtatgcc      1560
     ttcgactttt acgaaatgaa ttcaaggaca ccagctagag ctaaggaagc ccacatgcag      1620
     atgaaggccg cagcagtccg tggttcaaac acacgattgt tcggtctgga cggaaatgtc      1680
     ggcgagactc aggagaatac agagagacac acagctggcg atgtcagtcg caatatgcac      1740
     tctctgttgg gagtgcagca gcaccactag tctcctggaa accctgtttg cagtacctat      1800
     agtatgtact aataatgtat gtcagtgagg ttttacctcg tttttactat attacgtatg      1860
     tacttaaagc gtgaaccagt ctgcaggaca cagggttgga cccagtgtct tctggtgtag      1920
     cgtgtactag cgtcgagcca cgtgacggac agcactgggt gtggctttgc cattggtgct      1980
     gcgagtctct tggtgagagg cc                                               2002
//