ID DQ367845; SV 1; linear; genomic RNA; STD; VRL; 3368 BP. XX AC DQ367845; XX DT 19-FEB-2006 (Rel. 86, Created) DT 19-FEB-2006 (Rel. 86, Last updated, Version 1) XX DE Sesame necrotic mosaic virus replicase and truncated replicase genes, DE partial cds; coat protein gene, complete cds; and protein 4 (p4) and DE protein 5 (p5) genes, partial cds. XX KW . XX OS Sesame necrotic mosaic virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Aureusvirus; OC unclassified Aureusvirus. XX RN [1] RP 1-3368 RA Yan L., Chen K., Han C.; RT "Partial Sequence analysis of Sesame Necrotic Mosaic Virus"; RL Zhongguo You Liao Zuo Wu Xue Bao 24:61-66(2002). XX RN [2] RP 1-3368 RA Yan L., Xu Z., Chen K.; RT ; RL Submitted (16-JAN-2006) to the INSDC. RL Oil Crops Research Insitute, CAAS, No 2, Xudong 2nd Road, Wuchang, Wuhan, RL Hubei 430062, China XX DR MD5; 18f33f94721a16b59107318e6b40d0a3. XX FH Key Location/Qualifiers FH FT source 1..3368 FT /organism="Sesame necrotic mosaic virus" FT /host="Sesame" FT /lab_host="Nicotiana benthamiana" FT /isolate="Wuhan" FT /serotype="Wuhan" FT /mol_type="genomic RNA" FT /country="China:Wuhan" FT /PCR_primers="fwd_seq: aggagatggtggtccgaact, rev_seq: FT ctgtgtgccctccactacaa" FT /db_xref="taxon:369917" FT CDS <1..1599 FT /codon_start=1 FT /transl_except=(pos:49..51,aa:OTHER) FT /product="replicase" FT /note="amber stop codon readthrough" FT /db_xref="GOA:Q2ERI7" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q2ERI7" FT /protein_id="ABD34316.1" FT /translation="PLEAVKASYTGGFESKXGCLLRHRGFNTKVNSCLPDNVLSSREEM FT VVRTGTPVRNERTWYSFSGYASTYEYIVHNSSLVNVVRGLVERVFCVVRDGQLQRPLRP FT ALGVYEKKLGNIGRKISRIVGYCPAMTRQQFVDSYSGLRRATYEKARLSLDVLPCTRKD FT ACLKTFVKAEKINITLKPDPAPRVIQPRDPRYNVEVGRYLKNLEPRLMKAIDKLWGEKT FT AIKGYTVEQVGDILHRKSLGFRDPAFVGLDASRFDQHCSRQALEWEHSVYNAIFRDPYL FT AELLTWQIDNVGRAYLKDGMVKYRVDGCRMSGDMNTSMGNYLIMSCLVYAYCQEIGIHA FT SLANCGDDCVLFLERGDLNKLKSLPDWFAKMGYAMKVEKPVYAVEHIEFCQQHPVLLSR FT GWVMVRRPDVCLTKDVCIVRGGMTPERLQRWLYAQHDGGLSLAGDCPVLGAFYSQFPAG FT DRAGEQSEYDDAHKFKAGKQCGAITPTARYSFWMAFGLTPDEQIAIERDLKGWNPRVEE FT GEGHVVPTLLDHCSR" FT CDS <1..51 FT /codon_start=1 FT /product="truncated replicase" FT /db_xref="UniProtKB/TrEMBL:Q2ERI6" FT /protein_id="ABD34317.1" FT /translation="PLEAVKASYTGGFESK" FT CDS 1660..2793 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q2ERI5" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2ERI5" FT /protein_id="ABD34313.1" FT /translation="MALAAANTGKMLASGGRIADGTIRIIDGIRCVYNAASKMWRATKK FT QGNGATVGHPGALPGAVAAPIAISRQIRGSKPKFRSTKGVVTITHREFLSTVQAVNTGF FT LRLNNGVSPGYYRINPSNSAVTPWLVNIAANFDMYRFRNVSLRYIPMCATTEVGRVGLF FT WDKDSQDVGPFDRAELANYAHVAETSVWAEAVLNVPCDGQKRFCNDSAVADPKLTELGR FT IGFVTYGTNTSNFIGDVFIEYTVELHEPQPSSNLVAELLGTGGTFSAARGSNVIEWRSD FT TSSASVVSITFKPGTYLVQCVFDGTTVTGASVTAVGGGAVLNSKVVFSTTEGSISATVD FT MSEPNNRLDFGVTAAVLSGWNVFATRITRELALTINS" FT gene 2883..>3368 FT /gene="p4" FT CDS 2883..>3368 FT /codon_start=1 FT /gene="p4" FT /product="protein 4" FT /db_xref="GOA:Q2ERI4" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProtKB/TrEMBL:Q2ERI4" FT /protein_id="ABD34314.1" FT /translation="MEIVSLDGTFDESISVQNEVKKIVLSHSTTKAILPIAPKSSLSKW FT RIPKSGFYTPIDVRFVLTPHISERANVMAVVKLVDARDCSPSRILYQTKEFNLGAGIVV FT EGTQLPFCLPVGEYPLQFEVTVSRSQFRETSKLFTTSNEWRMMCSTTPLSRVRSVMGA" FT gene 3014..>3368 FT /gene="p5" FT CDS 3014..>3368 FT /codon_start=1 FT /gene="p5" FT /product="protein 5" FT /db_xref="UniProtKB/TrEMBL:Q2ERI3" FT /protein_id="ABD34315.1" FT /translation="MENPEEWVLYPDRCPFCSHATYIRTSQCDGGGKVSGRTRLFAEPY FT LVSDKGVQPWSWDCSGGHTVTLLPSGGGISFTVRSHGVAVSIQGDVQAIHNLQRMANDV FT LNHPIIQGKVCYGG" XX SQ Sequence 3368 BP; 794 A; 769 C; 924 G; 881 T; 0 other; ccccttgaag ccgtcaaagc ctcctacaca gggggctttg aaagcaaata ggggtgcctt 60 cttcgtcacc gcgggttcaa cacaaaggtc aattcatgct tacctgacaa tgtgttgtcc 120 agccgcgagg agatggtggt ccgaactggg acccctgtgc gtaatgagcg gacatggtac 180 tcattttctg gatacgccag cacttacgag tacattgtgc ataattcctc tctcgttaat 240 gttgttcgtg gattggtcga gagagtgttt tgcgtcgtga gagacggcca acttcaacgt 300 cctttacgcc cggcacttgg cgtgtatgag aagaagttgg gtaatattgg tcgtaaaatc 360 agccggatcg ttgggtactg ccccgctatg actcgacagc agtttgtcga ctcatatagc 420 ggcttgcgac gtgccacgta cgaaaaggcg cggttgtcct tggatgttct cccctgcact 480 aggaaagatg cttgcctcaa aacttttgtg aaagcggaga agatcaatat tacattaaaa 540 cccgatccag ccccgagagt tattcagcca cgtgaccctc ggtataatgt tgaagtggga 600 cgatacttga agaatcttga accccggctt atgaaggcta ttgataaact ttggggggaa 660 aagacagcaa ttaaggggta cactgttgag caagttggtg acattctgca ccgtaaaagc 720 ctcgggttcc gtgatccagc tttcgttggt cttgacgcta gccgttttga tcagcactgt 780 tcacggcaag cccttgaatg ggagcacagc gtttataatg cgatctttcg ggatccctat 840 ttggctgagc tccttacgtg gcagattgac aatgttggcc gtgcatacct caaggatgga 900 atggtcaagt atcgagttga cgggtgtcgg atgtctggag acatgaacac ttcaatgggc 960 aactacctga ttatgtcgtg tcttgtctat gcgtactgcc aggagatcgg tatccatgcc 1020 agtctagcta attgcggcga tgactgcgta ctctttctcg agcgtgggga tctgaacaag 1080 ttgaagtccc tgcctgactg gtttgctaag atggggtatg ctatgaaggt tgagaagcct 1140 gtgtatgcag ttgagcatat tgaattttgc cagcagcatc cagttttgtt atccagaggg 1200 tgggttatgg tcagaaggcc ggatgtttgt cttactaagg atgtgtgcat cgtacggggt 1260 ggtatgacac cggagcgact ccagcggtgg ctgtatgccc agcatgatgg cgggttatcc 1320 cttgcgggag actgtccagt gcttggtgct ttttacagcc agtttcctgc tggtgatcgg 1380 gccggggaac aatcagagta cgacgatgcc cataagttca aggccggtaa gcagtgtggt 1440 gctatcacgc cgaccgcaag gtactcgttt tggatggctt tcgggctcac acccgatgag 1500 cagattgcaa ttgaacggga cctcaaaggt tggaatcctc gcgttgagga aggggaggga 1560 catgtggttc ctaccctcct tgaccactgc tcaagataac tgaccattat cacctccatt 1620 tacctaacga tgactatgat cttaaagaac aagcctatga tggctttagc agcagcaaat 1680 actggaaaga tgttagcgag tggtggccgg attgctgatg gcaccatccg cattattgac 1740 ggaatacgtt gtgtttacaa tgcagcttca aagatgtggc gggcgacaaa gaagcaaggc 1800 aacggtgcca ctgttggcca tcctggggct ctcccggggg ctgttgcagc accgattgcc 1860 atttctcgcc aaatacgagg tagcaaacct aagtttcgca gtaccaaagg agttgtgacc 1920 atcactcacc gagagttcct cagcacggtc caggccgtga atacaggttt tcttcgcctg 1980 aataacgggg tatcgccagg ctactaccga attaatcctt ccaattcagc agttacacca 2040 tggcttgtca acattgccgc caatttcgac atgtatcgct tccgtaatgt ctcgcttcgg 2100 tatatcccaa tgtgtgcgac gacagaggtt ggccgtgtcg ggttgttctg ggacaaggat 2160 tcccaagatg taggcccgtt tgacagagca gagttggcta actatgcgca tgtggctgag 2220 acatcggtat gggctgaggc cgttttgaat gtaccctgtg acgggcagaa aaggttttgt 2280 aatgattcag ccgttgccga ccctaagctg actgaactcg ggcgtattgg atttgtcaca 2340 tatgggacta acaccagcaa tttcattggt gatgtgttta tcgagtatac tgtggaactt 2400 catgagccgc aaccttcctc aaacctagtt gctgagcttc tggggactgg gggcactttc 2460 tctgcagcaa gaggttcaaa cgtcatcgag tggcggagtg acacgagctc cgcctcagtt 2520 gtgtcaatta cgtttaaacc aggcacttat cttgttcagt gtgtatttga tgggactact 2580 gtgactggag catcagtcac tgctgtcggc ggtggggctg tccttaactc caaggtagtg 2640 ttttctacta ctgaggggtc catctctgcc accgttgaca tgtctgagcc taacaaccgt 2700 cttgactttg gggtcacagc agccgtattg tccggatgga atgtatttgc tacccgtatt 2760 acacgggagc tagcgttaac gattaattct taaggcatag tcgtgtgcga aagggaggtt 2820 ggattgaggg tggggcccag gccccactgc acttgagtgg ctcaagaaga ctgaccatct 2880 tcatggaaat tgtatctttg gacggaacat ttgacgaatc tataagtgta caaaacgaag 2940 tgaagaaaat agtgctttct cacagcacta caaaagccat actcccgata gcaccgaaga 3000 gtagtttgag taaatggaga atcccgaaga gtgggtttta taccccgatc gatgtccgtt 3060 ttgttctcac gccacatata tccgaacgag ccaatgtgat ggcggtggta aagttagtgg 3120 acgcacgcga ctgttcgccg agccgtatct tgtatcagac aaaggagttc aaccttggag 3180 ctgggattgt agtggagggc acacagttac ccttctgcct tccggtgggg gaatatcctt 3240 tacagttcga agtcacggtg tcgcggtctc aattcaggga gacgtccaag ctattcacaa 3300 cctccaacga atggcgaatg atgtgctcaa ccaccccatt atccagggta aggtctgtta 3360 tgggggct 3368 //