ID   DQ365928; SV 3; linear; genomic RNA; STD; VRL; 1654 BP.
XX
AC   DQ365928;
XX
DT   28-MAR-2006 (Rel. 87, Created)
DT   06-JUL-2007 (Rel. 92, Last updated, Version 5)
XX
DE   Catharanthus mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Catharanthus mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1654
RA   Maciel S.C., Silva R.F., Reis M.S., Rosa D.D., Giampan J.S., Kitajima E.W.,
RA   Rezende J.A.M., Camargo L.E.A.;
RT   "Characterization of a new Potyvirus causing mosaic and flower variegation
RT   in Catharanthus roseus in Brazil";
RL   Unpublished.
XX
RN   [2]
RP   1-1654
RA   Maciel S.C., Silva R.F., Reis M.S., Rosa D.D., Giampan J.S., Kitajima E.W.,
RA   Rezende J.A.M., Camargo L.E.A.;
RT   ;
RL   Submitted (17-JAN-2006) to the INSDC.
RL   Fitopatologia, Entomologia e Zoologia Agricola, Escola Superior de
RL   Agricultura 'Luiz de Queiroz' - ESALQ/USP, Av. Padua Dias, 11, Piracicaba,
RL   Sao Paulo 14000-260, Brazil
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1654
RA   Rosa D.D.;
RT   ;
RL   Submitted (26-SEP-2006) to the INSDC.
RL   Fitopatologia, Entomologia e Zoologia Agricola, Universidade de Sao Paulo,
RL   Av. Padua Dias, 11, Piracicaba, Sao Paulo 18730-600, Brazil
XX
RN   [4]
RC   Sequence update by submitter
RP   1-1654
RA   Rezende J.A.M.;
RT   ;
RL   Submitted (20-JUN-2007) to the INSDC.
RL   Fitopatologia, Entomologia e Zoologia Agricola, Universidade de Sao Paulo,
RL   Av. Padua Dias, 11, Piracicaba, Sao Paulo 13418900, Brazil
XX
DR   MD5; 2e7b6b118073aa276e366c0d9761aabd.
XX
CC   On Jul 2, 2007 this sequence version replaced gi:115343809.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1654
FT                   /organism="Catharanthus mosaic virus"
FT                   /host="Catharanthus roseus"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Piracicaba"
FT                   /db_xref="taxon:369752"
FT   CDS             <1..1368
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q06ZW1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q06ZW1"
FT                   /protein_id="ABI94824.2"
FT                   /translation="MVCMMMEYSKAKFQQFSMTEDNVRYYCNGDDLVIAVRPDSVSFLD
FT                   SLQSSFKELGLDYDFSHRTENVEELWFMSHKAQLREGVYIPKLEQERIVSILQWDRSTE
FT                   PTHRLEAICASMIEAWGYDELLHEIRKFYAWILEQQPYATLASEGKAPYIAETALRHLY
FT                   CGETIKVGDIEIYLREIVKEHNRMFEENLDDGVYHQSGETKTVDAGGDKQPEKPKEKDV
FT                   DAGSSGKMVLPKLKKMSGKMRMPTIHGRNILNVDHIIQYEPNQVDIANTRATKLQFENW
FT                   YNKVKNEYDVNDQQMSILMNGLMVWCIENGTSPNINGMWTMMEGDNQEEYPLKPIIENA
FT                   KPTFRQIMAHFSDAAEAYIEMRNSKEPYMPRYGLQRNLTDISLARYAFDFYEVTSRTPN
FT                   RAREAHMQMKAAALRNASFRLFGLDGNVSAEKEDTERHTTDDVNRAMHNMLGVRTL"
FT   mat_peptide     <1..597
FT                   /product="replicase NIB"
FT   mat_peptide     598..1365
FT                   /product="coat protein"
FT   3'UTR           1369..1654
XX
SQ   Sequence 1654 BP; 537 A; 298 C; 384 G; 435 T; 0 other;
     atggtttgca tgatgatgga atactcaaaa gccaaattcc aacaattctc tatgacagaa        60
     gataatgtta ggtactactg caatggagat gatttggtga ttgcagtgag gcctgacagc       120
     gtgagcttcc tcgatagctt acagagtagt ttcaaagagc ttggacttga ttatgacttt       180
     tcccatagaa ctgaaaatgt ggaggaatta tggtttatgt cgcacaaagc tcagctacgt       240
     gagggtgtct acatcccgaa actggaacag gagagaatag tctcaattct acagtgggat       300
     cgcagcaccg aacctacgca tagacttgaa gctatctgtg catcaatgat cgaggcatgg       360
     ggttacgatg aattacttca tgaaatacgg aaattctatg catggattct agaacagcaa       420
     ccctatgcaa ctttagctag tgaaggaaaa gccccataca tagctgagac agcactaaga       480
     cacttatatt gtggtgagac aatcaaagtg ggtgacattg aaatatatct tagggaaatt       540
     gtcaaagagc ataatcggat gtttgaggaa aaccttgacg atggtgttta tcaccagtct       600
     ggagagacta aaacagtaga tgcaggtggg gataaacagc cagagaagcc caaagaaaaa       660
     gatgtggatg ctggtagttc aggtaagatg gtactcccaa aactcaagaa gatgtctggc       720
     aagatgagaa tgccaactat tcacggaagg aacatattaa atgttgatca cataattcaa       780
     tatgaaccaa atcaggttga cattgccaac actcgtgcaa ccaaattgca atttgagaat       840
     tggtataaca aagtgaagaa tgaatatgat gtcaatgatc aacaaatgtc aatactgatg       900
     aacggactga tggtatggtg tattgaaaat ggcacttctc caaatataaa tggaatgtgg       960
     acaatgatgg agggcgataa ccaagaggaa tatcctttaa aaccaatcat tgaaaatgcc      1020
     aaacccacat tcagacaaat aatggcacat ttctcggacg cagctgaagc gtacatagaa      1080
     atgagaaatt caaaagaacc gtatatgcct agatacggtc ttcagcgcaa tttaactgac      1140
     atatcgcttg cacggtacgc atttgatttt tacgaagtca cttctaggac acctaaccga      1200
     gcgagggaag cacacatgca aatgaaagca gctgcgctaa gaaatgcaag ttttagactc      1260
     tttggtttgg atggtaatgt cagtgctgag aaggaagata cagagaggca caccactgat      1320
     gatgtcaatc gtgctatgca caatatgtta ggtgtgcgca ctctctaagt aagttacaag      1380
     ttcagctggg tcattttgac cgaaaacttg atatgtagta tctatgttct tagctttctt      1440
     tttatgtagt atttactctt aaggtaacca tgtgtgtgct gccaaggtag ttactacatg      1500
     gaggtattat gttaagatgt tttaaacaga agttccagat gagtgagggc ttccctccgg      1560
     gtctggtagc cacttagtga gggcttccct ccggcaccac aaacccagtc tgttatgtat      1620
     gtgtctacat aaagagtgtt cgagctgcct tgtc                                  1654
//