Dbfetch
ID DQ362934; SV 1; linear; genomic RNA; STD; VRL; 2559 BP. XX AC DQ362934; XX DT 08-FEB-2006 (Rel. 86, Created) DT 08-FEB-2006 (Rel. 86, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate LGR12 38K (2B) and 56K (2C) genes, partial DE cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-2559 RA Terlizzi F., Biolchini L., Credi R.; RT "Molecular characterization of Italian GFLV isolates"; RL Unpublished. XX RN [2] RP 1-2559 RA Terlizzi F., Biolchini L., Credi R.; RT ; RL Submitted (12-JAN-2006) to the INSDC. RL Department of Agroenvironmental Sciences and Technology, University of RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy XX DR MD5; 82e700af15ec1acd814ee789d713d202. XX FH Key Location/Qualifiers FH FT source 1..2559 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="V. vinifera/Lambrusco Grasparossa" FT /isolate="LGR12" FT /mol_type="genomic RNA" FT /country="Italy:Emilia Romagna" FT /db_xref="taxon:12274" FT gene <1..>1044 FT /gene="2B" FT CDS <1..>1044 FT /codon_start=1 FT /gene="2B" FT /product="38K" FT /note="movement protein" FT /db_xref="UniProtKB/TrEMBL:Q2HYV3" FT /protein_id="ABC96688.1" FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVVPGRAQRISERRQALRRRE FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY FT TLDFRLNGIPTGTNTLEILYNPVSDEEMDDYRDRGMSAVVIDALEIAINPFGMPGNPTD FT LTVVATYGHERNMECAFIGSSSTFLGNGLSRAIFFPGLQYSQEEPRRESIIRLYVASTN FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASAVHQAQVQGTTLRATMMGNTVVVSPEGS FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE FT PRMSSTVR" FT gene <1045..2559 FT /gene="2C" FT CDS <1045..2559 FT /codon_start=1 FT /gene="2C" FT /product="56K" FT /note="coat protein" FT /db_xref="GOA:Q2HYV2" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2HYV2" FT /protein_id="ABC96689.1" FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL FT VMPTFKIIVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTF FT SCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL FT GKPTLVFNPGIFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQVPMVGTTRVYNLNSTL FT VSCVLGMGGTIKGRVHICAPVFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGTFEV FT KIRSPYHRTPARLLANQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIDEIMRPDLSL FT PSFEDDYFVWVDFSEFTLDKEEIEIGCRFFDFTSNTCRVSMGENPFAAMIACHGLHSGV FT LDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSHVFAIQKLEGTAELLVGNFAGA FT NPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV" XX SQ Sequence 2559 BP; 648 A; 525 C; 667 G; 719 T; 0 other; gcggatggca ggactaccgg tgggcagacg attgctcaag aggctgatcc gttgcaacac 60 agggtcagca catccgtagt ccccggtagg gcgcaacgga tctctgaacg cagacaggct 120 ctgcggagga gagagcaggc aaacagcctg cagggtcttg ctgctcaaac tgatatgact 180 tttgagcaag ccaggaacgc ttatcttggt gctgctgaca tgattgagca aggcctaccg 240 ctgcttcccc ctctacgcag cgcttatgcc cctaggggtt tgtggagggg accctcaacc 300 agagccaatt atacgttaga ttttaggctc aatggtattc cgactgggac aaacacattg 360 gaaatattgt ataatcccgt gtcggacgag gaaatggatg actaccgtga caggggtatg 420 tcagcagttg tgattgatgc acttgaaatt gctataaatc cttttgggat gccgggcaat 480 ccgactgatc ttactgtcgt agccacatat gggcatgagc gtaacatgga atgtgccttt 540 attggttctt cttcgacctt tcttgggaat gggttgtcga gggccatttt cttcccaggt 600 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgcctata tgttgcttct 660 actaatgcta ctgtcgacac tgattcagtt ttggcagcca ttagtgttgg cactttgcgt 720 caacacgttg gctccatgca ttatcggaca gtggctagtg ccgtgcacca agcccaggtg 780 caaggcacga cactcagggc aactatgatg ggtaatactg ttgtagtgtc acctgaggga 840 agcctggtta ctggaacccc ggaagcgaga gttgaaatag gaggtggttc tagtattagg 900 atggtaggac ctctacaatg ggaaagcgta gaggagccag ggcaaacctt ctctatcagg 960 agtcgttcac gatctgtgag gattgataga aatgttgatc ttcctcaact tgaggctgag 1020 cccagaatga gctcaaccgt gagaggatta gctggtagag gagtgatcta tattcccaag 1080 gattgccagg caaataggta cttgggcacc ctgaacatac gtgatatgat ctctgatttt 1140 aagggtgttc agtatgaaaa gtggataact gcggggctag tcatgcctac ttttaagata 1200 attgttaggc tgcccgcaaa tgcctttact ggactgacat gggtgatgag ttttgatgct 1260 tataatcgga taactagtag aattactgct agtgcagatc ctgtgtacac actgtcggtc 1320 ccacattggc ttatccatca taagttgggc acgttttcat gtgaagtgga ttacggagag 1380 ctgtgcggtc atgctatgtg gtttaagtcc acaacatttg agtctccaag actacatttc 1440 acgtgtttaa cgggcaacaa taaagagttg gcggcagact ggcaagctgt cgtagaacta 1500 tatgctgaat tggaagaggc cacctctttt cttgggaaac caactttggt ttttaaccca 1560 ggtattttta atggcaaatt ccaatttttg acttgccctc ccatattctt tgatctaaca 1620 gccgtcacag ctcttaagag tgctgggctg actttgggac aagtcccaat ggttggcact 1680 accagagtct ataacctaaa tagcactctt gtaagttgtg ttttgggtat gggaggtact 1740 atcaagggaa gggtgcacat ctgtgctcca gtcttttata gtattgtttt gtgggttgtt 1800 agtgagtgga acgggaccac tatggattgg aatgaacttt tcaagtaccc cggggtgtat 1860 gtggaagagg atggcacttt tgaagtcaaa attcgctctc catatcatcg aacacctgct 1920 agattgcttg ctaaccaaag ccagagagat atgagctctc tgaatttcta tgcaatagcg 1980 ggacctatcg ctccatcggg tgaaactgcg cgacttccta tagttgtgca gattgatgag 2040 attatgcgcc cagacctctc tttaccaagt tttgaagatg actattttgt atgggtggat 2100 ttttctgagt tcactctcga caaagaagag attgagattg gttgtcgttt cttcgatttc 2160 acttcaaata cttgtagagt atctatggga gaaaatccgt ttgctgcaat gattgcctgt 2220 catggattgc acagtggtgt attagacctc aaatttcaat ggagtctgaa cactgaattt 2280 ggcaagagca gcgggagcgt tactatcacg aagctggtag gtgacaaagc tacaggtttg 2340 gacggacctt cacacgtttt tgctattcaa aaactggagg gaactgcaga actgttggtt 2400 gggaattttg cgggagcaaa cccaaacact catttctctc tctacagtcg gtggatggca 2460 attaaattgg accaagcaaa gagtattaaa gtactccgcg ttttgtgtaa gccacgtcca 2520 ggctttagtt tttatgggag aaccagcttt ccagtctag 2559 //