Dbfetch
ID DQ362930; SV 1; linear; genomic RNA; STD; VRL; 2559 BP. XX AC DQ362930; XX DT 08-FEB-2006 (Rel. 86, Created) DT 08-FEB-2006 (Rel. 86, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate NE185 38K (2B) and 56K (2C) genes, partial DE cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-2559 RA Terlizzi F., Biolchini L., Credi R.; RT "Molecular characterization of Italian GFLV isolates"; RL Unpublished. XX RN [2] RP 1-2559 RA Terlizzi F., Biolchini L., Credi R.; RT ; RL Submitted (12-JAN-2006) to the INSDC. RL Department of Agroenvironmental Sciences and Technology, University of RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy XX DR MD5; e6333cbca84aa37a9e2f7ca61b3022a0. XX FH Key Location/Qualifiers FH FT source 1..2559 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="V. rupestris St. George/Nebbiolo" FT /isolate="NE185" FT /mol_type="genomic RNA" FT /country="Italy:Piemonte" FT /db_xref="taxon:12274" FT gene <1..>1044 FT /gene="2B" FT CDS <1..>1044 FT /codon_start=1 FT /gene="2B" FT /product="38K" FT /note="movement protein" FT /db_xref="UniProtKB/TrEMBL:Q2HYW1" FT /protein_id="ABC96680.1" FT /translation="AEGRTTGGQTIAQEADPLQRRVSTSVAPGRAQWISERRQALRRRE FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGTSAVVIDALEIAINPFGMPGNPTD FT LNVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYGQEEPRRESIIRLYVASTN FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVANTVHQAQVQGTTLRATMMGNTVVVSPEGS FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE FT PRLSSTVR" FT gene <1045..2559 FT /gene="2C" FT CDS <1045..2559 FT /codon_start=1 FT /gene="2C" FT /product="56K" FT /note="coat protein" FT /db_xref="GOA:Q2HYW0" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2HYW0" FT /protein_id="ABC96681.1" FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL FT VMPIFKVVIRLPANAFTGLTWVMSFDAYNRITSRITVSADPVYTLSVPHWLIHHKLGTF FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL FT GKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSTL FT VSCVLGMGGTIKGKVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV FT KIRSSYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPTGETARLPVVVQIDEIERPDLSL FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSSTCKVSIGENPFAAMIACHGLHSGV FT LDLKLQWSLNTEFGKSSGSITVTKLVGDKALGLDGPSQVFAIQKLEGTTDLLIGNFAGA FT NPNTHFSLYSRWMAIKMDQAKSIKVLRILCKPRPGFSFYGRTSFPV" XX SQ Sequence 2559 BP; 663 A; 535 C; 662 G; 699 T; 0 other; gcggaagggc gcactaccgg tgggcaaaca attgctcaag aagctgatcc tttacaacgt 60 agggtcagca cttcagtggc ccccggtagg gctcaatgga tctctgagcg cagacaagct 120 ctgcggagga gagagcaggc aaatagcctg cagggtcttg ctgctcaaac tgatatgaca 180 tttgagcagg ccaggaatgc gtatcttggt gctgccgata tgattgagca aggcctacca 240 ctgcttcctc ctctgcgcag tgcatatgcc cctaggggct tgtggagggg accttctacc 300 agagccaatt acacgctaga tttcaggctc aatggtatac cgactgggac aaacacgttg 360 gaaatattat ataatcccgt gtcagaagaa gagatggaag agtaccggga taggggcacg 420 tcagccgtgg tgatcgatgc gctagaaata gcgataaacc catttggcat gcccgggaat 480 ccaacggact tgaatgtcgt agcgacatat gggcatgaac gtgatatgac acgtgccttt 540 attggatctg cttccacgtt cctagggaat gggctagcta gagccatttt ctttcctggt 600 ttgcaatatg gccaggagga accaaggcgc gaatctataa ttcgcctata tgtcgcctct 660 actaatgcca ctgtggacac tgactcagtc ctggcagcca tcagtgttgg tactttgcgc 720 caacacgttg gctccatgca ttatcggaca gtggctaata ccgtgcacca agcccaggtg 780 caaggtacaa cgcttagggc cactatgatg ggtaatactg ttgtagtgtc gcctgaagga 840 agcctagtta ctgggacccc cgaagccaga gttgaaatag gaggtggttc tagtatcagg 900 atggtaggac ctctacaatg ggaaagtgtg gaggaaccag ggcaaacctt ctctatcaga 960 agccgctcac gatctgtgag gattgataga aatgttgatc ttcctcagct tgaagctgag 1020 cctagactga gctcaaccgt gaggggatta gctggtagag gagtaattta tatcccaaag 1080 gattgccagg caaacaggta cttgggcacc ctgaatatac gagatatgat ctcggatttt 1140 aagggagtcc agtatgaaaa gtggataact gcaggattag tcatgcctat tttcaaggtt 1200 gttattaggc tacctgcaaa tgcctttact ggtttgacgt gggtgatgag ctttgatgct 1260 tataatcgga taactagcag aattactgtt agtgcggatc ctgtgtacac cctgtcagtc 1320 ccacattggc tcatccacca taagttgggc acgttttcat gtgagataga ttatggagaa 1380 ctatgtggtc atgccatgtg gtttaagtcc acaacatttg aatctccaag gttacatttt 1440 acatgcctaa ctggtaataa taaagagtta gcagcagact ggcaagctgt tgttgagctt 1500 tatgcagaat tggaagaagc cacatccttc cttggaaagc ccaccttggt ttttgacccg 1560 ggtgttttta atggcaaatt ccaattcttg acttgccctc ccatattctt tgatctaaca 1620 gccgtcacgg ctctcaggag tgctgggctg acgctgggcc aggtcccaat ggtcggcact 1680 accaaggttt ataacctaaa tagcaccctt gtgagttgtg ttctaggaat gggaggtact 1740 attaaaggaa aggttcacat ttgtgcgcca atcttttata gtattgtttt atgggttgtt 1800 agcgagtgga acgggaccac tatggactgg aatgagcttt tcaagtatcc cggggtgtat 1860 gtggaagaag atggaagttt tgaagttaaa attcgttctt catatcaccg aacgcctgct 1920 agattgcttg ctggtcaaag tcaaagggac atgagctctt tgaattttta tgcaatagca 1980 ggacctattg ctccaacggg tgagactgca cgacttcctg ttgtcgtgca gattgatgaa 2040 atcgagcgcc cagacctctc tttgccaagt tttgaagatg attattttgt gtgggtggat 2100 ttttctgaat tcactcttga caaagaagaa attgagattg gatctcgttt ctttgatttc 2160 acttcaagta cttgcaaagt gtctattgga gagaatccgt ttgctgcaat gattgcctgt 2220 cacgggttgc atagtggtgt attagacctc aaattacaat ggagtctgaa caccgaattt 2280 ggcaagagca gcgggagcat caccgttacg aagctggttg gtgataaagc tttgggcctg 2340 gatggacctt ctcaagtctt tgctattcaa aaactagagg gaactacaga tttgcttatt 2400 gggaattttg caggagcaaa cccaaacacg catttctccc tttatagtcg ttggatggca 2460 attaagatgg accaagcaaa gagtattaag gtactccgca ttttgtgtaa gccacgtcca 2520 ggtttcagtt tctatggaag aaccagcttc ccagtctag 2559 //