ID DQ358913; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC DQ358913; XX DT 23-JUN-2006 (Rel. 88, Created) DT 23-JUN-2006 (Rel. 88, Last updated, Version 1) XX DE Tomato yellow leaf curl Mali virus-[Ethiopia] segment DNA-A, complete DE sequence. XX KW . XX OS Tomato yellow leaf curl Mali virus-[Ethiopia] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RX DOI; 10.1094/PD-90-0974A. RX AGRICOLA; IND43914767. RA Shih S.L., Green S.K., Tsai W.S., Lee L.M., Wang J.T., Tesfaye A.; RT "First Report of a Begomovirus Associated with Tomato Yellow Leaf Curl RT Disease in Ethiopia"; RL Plant Dis. 90(7):974-974(2006). XX RN [2] RP 1-2785 RA Shih S.L., Green S.K., Lee L.M., Tesfaye A.; RT ; RL Submitted (11-JAN-2006) to the INSDC. RL Virology, AVRDC-The World Vegetable Center, P.O. Box 42, Shanhua, Tainan, RL Taiwan, Republic of China XX DR MD5; bffc5c4aeac24d83f9b5eb47b22ec30d. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC5796946; 29430354. XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="Tomato yellow leaf curl Mali virus-[Ethiopia]" FT /segment="DNA-A" FT /host="tomato" FT /isolate="AFLEP2-3-19" FT /mol_type="genomic DNA" FT /country="Ethiopia:Melkassa" FT /db_xref="taxon:391337" FT gene 148..498 FT /gene="V2" FT CDS 148..498 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q15GJ7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q15GJ7" FT /protein_id="ABC87987.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQAPIMDVQAHV FT PKAQNIQNVSKP" FT gene 308..1084 FT /gene="V1" FT CDS 308..1084 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q15GJ6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q15GJ6" FT /protein_id="ABC87988.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGTNRRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDITRGTGITH FT RVGKRFCVKSIYFLGKVWMDDNIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDFRDRFQVIRKFHATVIGGPSGMKEQALVKRFFRINCHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="C3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein" FT /db_xref="GOA:Q15GJ5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q15GJ5" FT /protein_id="ABC87991.1" FT /translation="MDLRTGELITALQAENGVFIWEINNPLYFKITNHDERPFNTNNDI FT ISMQIRFNHNIRKVLGIHKCFLNFRIWTTLRPQTGRFLRVFRYQVLKYLDNLGVISLNN FT VIRAADHVLYDVFVNTLQVTENHEIKYKFY" FT gene complement(1226..1633) FT /gene="C2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activation protein" FT /db_xref="GOA:Q15GJ4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q15GJ4" FT /protein_id="ABC87990.1" FT /translation="MQPSSPSTSHCSQVPIKVQHKIAKKKPIRRRRVDLDCGCTYYLDI FT NCIDHGFTHRGTHHCSSSREWRFYLGDKQSPLFQNNQPRRAAIQHEQRHHFNADKIQSQ FT HQEGTGDSQMFSQLPNLDDLTASDWSFLKSI" FT gene complement(1542..2621) FT /gene="C1" FT CDS complement(1542..2621) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q15GJ3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q15GJ3" FT /protein_id="ABC87989.1" FT /translation="MAPPKRFKINAKNYFLTYPQCSLSISEALSQLQTLETPVKKLYIK FT ICREFHENGEPHLHALVQFEGKYQCTNNRFFDLVSPTRSSHFHPNIQGAKSSSDVKSYI FT DKDGDTIDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRVIRELAPKDYILQFH FT NLNSNLDRIFQEPLAPYISPFLSSSFNQVPEELEVWVSENAMPSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWAFKNATFITLYEPL FT FSSTNQGPAQDSQEETNQA" FT gene complement(2162..2464) FT /gene="C4" FT CDS complement(2162..2464) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q15GJ2" FT /protein_id="ABC87992.1" FT /translation="MGNLICMPLFSSKASTSARITDSSTWYPQPDHHISIQTFRELNPH FT LMSNPTSIKMETPSTGASFRSTDDLQEGVSNQPTTLTPQHLTQAVSQRLLESLGN" XX SQ Sequence 2785 BP; 746 A; 555 C; 624 G; 860 T; 0 other; accggatggc cgcgcccttt ctttttttgt tgtccccacg tgggtcccac acacgtcgct 60 atcaaccaat caaattgcag cctcaaacgt tagataattg ttcatttgtc tttatatact 120 tggtccccaa gttttatttc ctgcaatatg tgggacccac ttctcaatga atttcctgaa 180 tccgttcacg gatttcgttg tatgttagct attaaatatt tgcaggccgt tgaggaaacg 240 tacgagccca acaccttggg ccacgattta attagggatc ttatatctgt tgtaagggct 300 cgtgactatg tcgaagcgac ccggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgccccca ttgtccaagg 420 cacaaacagg cgccgatcat ggacgtacag gcccatgtac cgaaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggt ccatgtaagg tccagtctta 540 tgagcaacgg gatgatatta agcatactgg cattgttcgt tgtgtgagtg atattactcg 600 tggaactggt attacccaca gagtgggtaa gaggttttgt gttaagtcca tatatttctt 660 aggtaaggtc tggatggatg ataacatcaa gaagcagaac cacaccaatc aggtcatgtt 720 cttcttggtt cgtgatagaa ggccctatgg aaatagccca atggattttg gacaggtttt 780 taatatgttt gataatgagc ccagtaccgc aaccgtgaag aatgatttta gggataggtt 840 tcaagtgatt aggaaatttc atgctactgt tattggtggt ccttctggaa tgaaggaaca 900 ggctttagtt aagagatttt ttaggatcaa ttgtcatgta acgtataatc atcaggaggc 960 agccaagtat gagaatcata ctgaaaacgc cttgttgttg tatatggcat gtacgcatgc 1020 ctctaatcca gtgtacgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tttcatgatt ctccgtaact tggagtgtgt ttacaaatac 1140 atcatacaat acatgatcag ctgctctaat tacattgtta agtgaaatta ctcctaagtt 1200 atctaaatat ttaagtactt gatatctaaa tactcttaag aaacgaccag tctgaggccg 1260 taaggtcgtc caaattcgga agttgagaaa acatttgtga atccccagta ccttcctgat 1320 gttgtgattg aatcttatct gcattgaaat gatgtcgttg ttcgtgttga atggccgctc 1380 gtcgtggttg gttattttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcttga agagcagtga tgagttcccc tgtgcgtaaa tccatggtcg atgcagttga 1500 tatcgagata gtatgtgcag ccacagtcta ggtcgacacg cctacgcctg attggtttct 1560 tcttggctat cttgtgctgg accttgattg gtacttgaga acagtggctc gtagagggtg 1620 atgaaggttg cattcttgaa agcccaattt ttcaaagata tgtttttttc ctcgtctaga 1680 tattctctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattctttaa agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 tcattactgt acacctttgg gcttaggtcc aaatgtccac ataaataatt atgtggtcct 1920 agagacctgg cccacatcgt cttgccggtc cgactatcac cctcgatgac aatactatta 1980 ggtctccatg gccgcgcagc ggaaggcatg gcgttctcgg acacccagac ttcaagttct 2040 tcaggaactt gattaaaaga agaagataaa aaaggagaaa tatagggagc cagaggctcc 2100 tgaaaaatcc tatctaaatt actatttaaa ttatgaaatt gtaaaatata gtctttgggg 2160 gctagttccc taatgactct aagagcctct gacttactgc ctgagttaag tgctgcggcg 2220 taagcgtcgt tggctgattg ctgaccccct cttgcagatc gtccgtcgat ctgaaactcg 2280 ccccagtcga tggtgtctcc atctttatcg atgtaggatt tgacatcaga tgaggattta 2340 gctccctgaa tgtttggatg gaaatgtgat gatctggttg gggataccag gtcgaagaat 2400 ctgttattcg tgcactggta cttgccttcg aactgaacaa gggcatgcag atgaggttcc 2460 ccattttcgt gaaactctct gcaaatttta atgtataatt tttttacagg agtttcgagg 2520 gtttgtagtt gggaaagtgc ttcagatatt gaaagagaac actggggata agtaaggaaa 2580 taatttttgg catttatttt aaaacgcttt gggggagcca tttggtcaat gtaccccgat 2640 tgacttggat ttcatttggc acctgcaatc ggtgtaatgg ggtacaatat atacttgtac 2700 ccctaatggc aatttggtaa taactccata cctttaattt aaaattcaaa aatcaaatca 2760 ttaaagcggc catccgtcta atatt 2785 //