ID DQ355974; SV 1; linear; genomic RNA; STD; VRL; 3399 BP. XX AC DQ355974; XX DT 04-FEB-2006 (Rel. 86, Created) DT 14-FEB-2007 (Rel. 90, Last updated, Version 4) XX DE Capsicum chlorosis virus isolate CaCV-CP nonstructural protein (NSs) and DE nucleocapsid protein (N) genes, complete cds. XX KW . XX OS Capsicum chlorosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus; OC Capsicum chlorosis orthotospovirus. XX RN [1] RP 1-3399 RX DOI; 10.1111/j.1439-0434.2007.01217.x. RX AGRICOLA; IND43878570. RA Chen K., Xu Z., Yan L., Wang G.; RT "Characterization of a New Strain of Capsicum chlorosis virus from Peanut RT (Arachis hypogaea L.) in China"; RL J. Phytopathol. 155(3):178-181(2007). XX RN [2] RP 1-3399 RA Chen K., Xu Z., Yan L.; RT ; RL Submitted (09-JAN-2006) to the INSDC. RL Department of Plant Protection, Oil Crops Research Institute of Chinese RL Academy of Agricultural Sciences, No. 2 Xudong Road, Wuhan, Hubei 430062, RL China XX DR MD5; 590446165e9b248c02ea5f5731234186. XX FH Key Location/Qualifiers FH FT source 1..3399 FT /organism="Capsicum chlorosis virus" FT /host="peanut" FT /strain="Chinese peanut" FT /isolate="CaCV-CP" FT /serotype="WSMoV" FT /mol_type="genomic RNA" FT /country="China" FT /PCR_primers="fwd_seq: tcatctagagcaatcgg, rev_seq: FT agagcaatcgaggcgct" FT /note="acronym: CaCV" FT /db_xref="taxon:163325" FT gene 67..1386 FT /gene="NSs" FT CDS 67..1386 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q2I0F6" FT /protein_id="ABC86906.1" FT /translation="MSTAKSAASEFVKSYGTRDNRAINDCYSVFSGEGVNFLSLFMHNN FT AGIKSAFSINDLGRNEDVKIHEAEVIDTCHDYNYFEKFGLDITFCEHEMRLVVKKPGIK FT NTGCKFSMHNQIFNPNNDTLSIVPTTIQEEVFHEKSKIRSNDLLPSDWCLDEFWKNNFY FT IATNGEFSLDYGFSVMGKTTSYWRENISREKILSFKHKSLPDNTVPTNRLLSTSIVKGI FT QLGSELAPETTVILSCKQNLDIDLKSQYRISFHGIQEEGAFTRTFCIPFENKSRIICFY FT AKTVADNSNERTTLIIKVVTKTIDSHLMIPIRNHINCSRLVGARIGLVDFCDADPNYNQ FT MIVKELLGVHTQFAMNLSGALKKPIIVFKMYDKELINGHVEVSGRVLNYQVDADGNIYF FT LSKTLEVLPRSLSTLSYLNSVAPTLWKESLEHQHFIVELK" FT gene complement(2506..3333) FT /gene="N" FT CDS complement(2506..3333) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q2I0F5" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q2I0F5" FT /protein_id="ABC86907.1" FT /translation="MSNVRQLTEKKIRELLAGGTADVEIETDDSTPGFNFKTFYDNNKG FT VEMTFTNCLNILKCRKQIFAACKSGKYKFCDKTIVSTAAEVGPEDWTFKRTEALIRVKM FT VNMVEKSKNEAARQEMYAKVMELPLVAAYGLNVPTSYDSCALRMMLCIGGPLPLLSSIR FT GLAPVIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQVEFKEDLDRLFKQAVKL FT LSESNPGTASSISLKKYDEQVKYMDKAFSANLSVDDYGEHSKKSSKPSSSIEV" XX SQ Sequence 3399 BP; 1127 A; 661 C; 573 G; 1038 T; 0 other; agagcaatcg aggcttctaa taattcaaga taaacagcaa taagatcaag aaatactaat 60 tcaggcatgt ctactgcaaa gagtgctgct tcagaattcg tgaagagcta tggaacaaga 120 gacaatagag ctatcaatga ctgctattct gttttctctg gagaaggtgt caactttctc 180 agtttgttta tgcataacaa tgcaggtatt aaatctgcat tcagcatcaa cgatttggga 240 aggaatgagg atgtcaaaat ccatgaagct gaggttattg atacatgcca tgattataat 300 tactttgaga agtttggcct agatataaca ttttgcgagc acgagatgag actagttgtg 360 aagaaacctg gtataaagaa cacaggctgc aagttctcaa tgcataatca gatcttcaac 420 ccaaacaatg ataccttatc cattgtccca acgacaattc aagaggaagt ctttcatgag 480 aagagtaaga taagatctaa tgaccttctc ccctccgatt ggtgcttaga tgagttctgg 540 aagaacaatt tctacatagc cacaaacgga gaattttccc tagactatgg attctctgtg 600 atgggtaaaa caacctccta ttggagagag aacatctcaa gagagaagat cctatctttc 660 aaacacaaaa gccttcctga caacactgtt ccaaccaata ggttgttgtc tacatcaatt 720 gttaaaggta ttcagctagg ctctgagtta gcacctgaaa ctacagtaat actgtcatgc 780 aaacagaatc ttgatattga tctgaaatct cagtatcgca tttcatttca tggtattcaa 840 gaagaaggtg ccttcacaag aactttctgc attccatttg agaataagtc tagaattatt 900 tgtttctatg ctaaaactgt tgctgacaat agcaatgaaa ggacgacttt aatcataaag 960 gtggttacaa aaaccattga ttctcacttg atgataccca tcagaaacca tatcaattgc 1020 agcaggttgg ttggagctag aataggttta gttgatttct gtgatgctga tccaaattac 1080 aatcagatga ttgtgaaaga attacttggt gtccacactc agtttgcaat gaatctatct 1140 ggtgccctga agaaacctat cattgtgttc aaaatgtatg ataaagaatt gataaatgga 1200 catgtggaag tttcaggaag agtcttgaac taccaagtag atgcagacgg gaacatttac 1260 ttcctttcaa agactcttga agttctacct agatctcttt caacattgag ttatttgaat 1320 agtgtagcac caacactatg gaaggaatct ttggagcacc aacactttat tgtggagctt 1380 aaataacttt tgagtgaaca actctgtcca ttgctttaat ataatcattt agataaataa 1440 ttttccaata taaactttat aagttaagat aaccataaat ccataaatat aaccaaataa 1500 atatagccat agtcaagtaa aggtaactat agctaaatag gaatataaat aagtaattta 1560 aattccaaat ttaatccagg taaaatttaa tcaagtatac ggtcataaac ttagttattc 1620 attagtaaat aaagacctcg aaagagctaa tgaaccaagg ggtcaattct cccttcttcc 1680 cagatctcat aacactgaac gttctcctca ccatataaaa catatctcga accttcctgt 1740 tagcataact cttttgtctt gactgcgccg tatgaagccg ctcctgaatc actttcacct 1800 tgtccaaagc atcctgtacc aagtgtgtac ccaaaagctt agcctcgccc gcctcaaacc 1860 aacttggtcc atctgaatac tcaattgata actgttgttt taagcaaact ccgtgaacgt 1920 tataaactgg tcccatgaac ccccaaaatc aatgacacaa gcgcacaacc tgtccttcaa 1980 tatatgaata gtgcgctcgg attgccgtcc atctgagggt gaaaagttat gattaactca 2040 acctgagtac ctaacactcg ttatacaact cccaaaaact acgatgtgaa ctgagtacct 2100 ctatctgaaa tgatgaaaac tgggacacca tgcaggcgag caatctctcg gatataaatt 2160 ttggtaacca ctttaaaaaa taggtagtac acactggaat gaagtgcgcg gacttggtca 2220 gtcggtccac aatatttata gatatgtata tttatatatt tatatattta tatcttgatg 2280 gaagatagat atatatactt tagacaaact tttatctatt tgagaacttt ctatatctat 2340 atttacgcat attgaacaaa caagcacgaa gtataagcag atgactgtag tatataaatt 2400 ataatctaaa taaactaaca taaatcgatt tatatataaa catgaatata aatttatatg 2460 aatatagtta tatattctac atataaatga ctatatctac ttaaatcaca cttctataga 2520 tgagctaggt ttggagctct tctttgaatg ttcaccgtaa tcatccacag acaaattagc 2580 actgaaagcc ttatccatgt atttaacttg ttcatcatac ttcttaagtg aaatagagct 2640 agcagtacca gggttacttt cgcttaacaa cttgacagct tgtttgaaca acctgtctag 2700 atcttcctta aattctactt gagaagcaga aagaacttta gccactttgc aaacctgctc 2760 ataagtagag aaattcttaa tgcctagctt ctcttttttg acattttgat aataagccaa 2820 cgggaagatg actggtgcaa ggcctctaat gctggacaaa agaggtaggg gtcccccaat 2880 gcatagcatc atcctaagag cacaagagtc atatgaagta ggcacattca acccataagc 2940 agctactaat ggcaattcca tcacctttgc atacatttcc tgcctggcag cttcattttt 3000 gcttttctct accatgttga ccatctttac tcttatcaga gcctctgttc tcttaaaagt 3060 ccaatcttct ggaccaacct cagcagctgt agaaacaata gttttatcac aaaatttata 3120 cttaccactt ttgcaagcag caaaaatctg ttttctgcat tttaagatat tcaagcaatt 3180 tgtgaaagtc atttcaacac ccttgttatt atcataaaat gtcttgaagt tgaatcctgg 3240 agttgaatca tcagtttcta tttcaacatc tgcagtacca ccagccaaga gttccctaat 3300 tttcttttcg gtaagttgcc tgacgttaga catggtgttt actctggaaa cgtctaatat 3360 gatgactttg aatggattta ttagcgcctc gattgctct 3399 //