ID DQ355023; SV 1; linear; genomic RNA; STD; VRL; 6375 BP. XX AC DQ355023; XX DT 03-JUL-2007 (Rel. 92, Created) DT 04-APR-2012 (Rel. 112, Last updated, Version 2) XX DE Bell pepper mottle virus, complete genome. XX KW . XX OS Bell pepper mottle virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6375 RX DOI; 10.1007/s00705-007-0950-0. RX PUBMED; 17334946. RA Rhie M.J., Min B.E., Hong J.S., Song Y.S., Ryu K.H.; RT "Complete genome sequence supports bell pepper mottle virus as a species of RT the genus Tobamovirus"; RL Arch. Virol. 152(7):1401-1407(2007). XX RN [2] RP 1-6375 RA Rhie M.J., Song Y.S., Min B.E., Ryu K.H.; RT ; RL Submitted (06-JAN-2006) to the INSDC. RL Horticultural Science, Seoul Women's University, 126 Gongreung-Dong RL Nowon-Gu Plant Virus Genbank, Seoul Women's University, Seoul 139-774, RL South Korea XX DR MD5; 3e18b1c3b6159f380706397c8362bb73. DR EuropePMC; PMC5282660; 28137291. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01077; TLS-PK2. XX FH Key Location/Qualifiers FH FT source 1..6375 FT /organism="Bell pepper mottle virus" FT /host="eggplant" FT /mol_type="genomic RNA" FT /country="Netherlands" FT /db_xref="taxon:368735" FT gene 72..4868 FT /gene="BPeMVgp1" FT CDS 72..4868 FT /codon_start=1 FT /transl_except=(pos:3420..3422,aa:OTHER) FT /gene="BPeMVgp1" FT /product="181 kDa replicase" FT /note="contains readthrough codon" FT /db_xref="GOA:A6XBA0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A6XBA0" FT /protein_id="ABC87810.1" FT /translation="MAYTQTASSAALLDTVRGNNTMVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVVSEEQTLIATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQVPYGSL FT TYDIGGNFASHLFKGRDYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERSKKTVPAFQ FT KSAFDKYAEVKDEVVCHDTFQTCKHRQDAYTGRVYAIALHSIYDIPADEFGAALLRKDV FT HVCYAAFHFSEDLLLEDSHANLDEINACFSRDGDKLSFSFASESTLNYVHSFSNVLKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHRATDSEQFYAAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETNKRTRKEVLVSKDFV FT YTVLNHIRTYQAKALTYTNVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLH FT TKLAVLKDDLMISKFTLGTKSVSQYVWDEVTIAFGNAFPSIKERLINRRLITVSEQALE FT ITVPDLYVTFHDRLVTEYKQSVEMPGLDIRKKMEETEQMYNALSEISVLKNSDKFDVDV FT FSQMCCTLNVDPMVAAKVMVAVVSNESGLTLTFEKPTEANVAMALQDSVSASDGAMVLT FT SRDIEEPSMKGSMARGELQFAGLTGDITETSFTKNEEIESLAQFHMATASSLIKKQMCS FT IVYTGPLKVQQMKNYIDSLVASLSAAVSNLVKILKDTAAIDLETSQKFGVFDVAMKKWL FT IKPSAKNHAWGVVETQERSYHVALLEYNGSEIVMCENWRRIAVSAESVVYSDMAKLKTL FT RGLLRNGEPHVSTAKVVLVDGVPGCGKTKEILSKVNFDEDLILVPGRQAAEMIRRRANA FT TGILVATKDNVRTVDSFIMNYGKNARCQFKRLFVDEGLMLHTGCVNFLVSMSLCDVAYI FT YGDTQQIPYINRVTGFPYPEHFSKLEVDEVETRRTTLRCPADVTFFLNQKYEGQVMCTS FT SEKRSVSQEMVKGAAAINPVSKPMKGKILTFTQFDKDALLSRGYADVHTVHEVQGETYP FT DVSLVRLTPTPVSIIARESPHVLVALSRHTKSLKYYTVVMDPLVSIIRDLERVSTFLLD FT MYKVDAGVQXQLQVDSVFSGTNLFVAAMQFYYDKCLPGNSSLFNDFDAVTMKLTDISLN FT VKDCTLDMSKSVAQPREKVGAPLIPVVRTAAEMPRQTGLLENLVAMIKRNFNSPELSGI FT VDIENTASLVVDRFFDSYMLKEKRKPNKNVSMFSRESLNRWLAKQEQVTIGQLTDFDFV FT DLPAVDQYRHMIKAQPKQKLDLSIQTEYPALQTIVYHSKKINAIFGPLFSELTRQLLDS FT IDSSRFLFFTRKTPEQIEEFFSDLDSHVPMDILELDVSKYDKSQNEFHCAVEYEIWRRL FT GFEDFLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNTVIIAACLASMLPM FT EKVIKGAFCGDDSLLYFPKGCDFPDVQQSANLMWNFEAKLYRKTYGYFCGRYVIHHDRG FT CIVYYDPLKLISKLGAKHIKDREHLEEFRRSLCDVASSLNNCAYYGQLDDAVGEVHKTA FT PPGSFVYKSLVKFLSEWQL" FT gene 72..3422 FT /gene="BPeMVgp2" FT CDS 72..3422 FT /codon_start=1 FT /gene="BPeMVgp2" FT /product="126 kDa replicase" FT /db_xref="GOA:A6XBA1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A6XBA1" FT /protein_id="ABC87811.1" FT /translation="MAYTQTASSAALLDTVRGNNTMVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVVSEEQTLIATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQVPYGSL FT TYDIGGNFASHLFKGRDYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERSKKTVPAFQ FT KSAFDKYAEVKDEVVCHDTFQTCKHRQDAYTGRVYAIALHSIYDIPADEFGAALLRKDV FT HVCYAAFHFSEDLLLEDSHANLDEINACFSRDGDKLSFSFASESTLNYVHSFSNVLKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHRATDSEQFYAAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETNKRTRKEVLVSKDFV FT YTVLNHIRTYQAKALTYTNVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLH FT TKLAVLKDDLMISKFTLGTKSVSQYVWDEVTIAFGNAFPSIKERLINRRLITVSEQALE FT ITVPDLYVTFHDRLVTEYKQSVEMPGLDIRKKMEETEQMYNALSEISVLKNSDKFDVDV FT FSQMCCTLNVDPMVAAKVMVAVVSNESGLTLTFEKPTEANVAMALQDSVSASDGAMVLT FT SRDIEEPSMKGSMARGELQFAGLTGDITETSFTKNEEIESLAQFHMATASSLIKKQMCS FT IVYTGPLKVQQMKNYIDSLVASLSAAVSNLVKILKDTAAIDLETSQKFGVFDVAMKKWL FT IKPSAKNHAWGVVETQERSYHVALLEYNGSEIVMCENWRRIAVSAESVVYSDMAKLKTL FT RGLLRNGEPHVSTAKVVLVDGVPGCGKTKEILSKVNFDEDLILVPGRQAAEMIRRRANA FT TGILVATKDNVRTVDSFIMNYGKNARCQFKRLFVDEGLMLHTGCVNFLVSMSLCDVAYI FT YGDTQQIPYINRVTGFPYPEHFSKLEVDEVETRRTTLRCPADVTFFLNQKYEGQVMCTS FT SEKRSVSQEMVKGAAAINPVSKPMKGKILTFTQFDKDALLSRGYADVHTVHEVQGETYP FT DVSLVRLTPTPVSIIARESPHVLVALSRHTKSLKYYTVVMDPLVSIIRDLERVSTFLLD FT MYKVDAGVQ" FT gene 3474..4868 FT /gene="BPeMVgp3" FT CDS 3474..4868 FT /codon_start=1 FT /gene="BPeMVgp3" FT /product="RNA polymerase" FT /note="53 kDa protein" FT /db_xref="GOA:A6XBA2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A6XBA2" FT /protein_id="ABC87812.1" FT /translation="MQFYYDKCLPGNSSLFNDFDAVTMKLTDISLNVKDCTLDMSKSVA FT QPREKVGAPLIPVVRTAAEMPRQTGLLENLVAMIKRNFNSPELSGIVDIENTASLVVDR FT FFDSYMLKEKRKPNKNVSMFSRESLNRWLAKQEQVTIGQLTDFDFVDLPAVDQYRHMIK FT AQPKQKLDLSIQTEYPALQTIVYHSKKINAIFGPLFSELTRQLLDSIDSSRFLFFTRKT FT PEQIEEFFSDLDSHVPMDILELDVSKYDKSQNEFHCAVEYEIWRRLGFEDFLAEVWKQG FT HRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNTVIIAACLASMLPMEKVIKGAFCGDDS FT LLYFPKGCDFPDVQQSANLMWNFEAKLYRKTYGYFCGRYVIHHDRGCIVYYDPLKLISK FT LGAKHIKDREHLEEFRRSLCDVASSLNNCAYYGQLDDAVGEVHKTAPPGSFVYKSLVKF FT LSEWQL" FT gene 4856..5692 FT /gene="BPeMVgp4" FT CDS 4856..5692 FT /codon_start=1 FT /gene="BPeMVgp4" FT /product="movement protein" FT /note="30 kDa" FT /db_xref="GOA:A6XBA3" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:A6XBA3" FT /protein_id="ABC87813.1" FT /translation="MAIVVKDKVNVNDFINLSNSEKYLPSNSEKYLPSLMTPVKSVRIS FT KVDKVLARENETLSEVDLLKGVKLIEGGYICLAGLVVTGEWNLPDNCTGGVSVCLVDKR FT MERASEATLGSYYTGAAKKRFQFKVTPNYSVTTDDAKKNIWQVLVNIKGVRMSAGFCPL FT SLEFVSVCIVFKNNIKLGLREKITRVTDAGPMELTEEVVDEFIENVPMAARLARFRTKS FT SKTGPKKFVRNSRDSKVRSNNLNRGVRPKFEEEGIVSDKLINDESESIDADSDSYL" FT gene 5695..6177 FT /gene="BPeMVgp5" FT CDS 5695..6177 FT /codon_start=1 FT /gene="BPeMVgp5" FT /product="coat protein" FT /note="17 kDa" FT /db_xref="GOA:A6XBA4" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:A6XBA4" FT /protein_id="ABC87814.1" FT /translation="MSYTVNSPSQLVYLSSAWADPTDLLNLCTNSLGNQFQTQQARTTV FT QQQFSDVWKPTPQAGVRFPASGFKVYRYNAVLDPLITALLGTFDTRNRIIEVENQQNPT FT TAETLDATRRVDDATVAIRSAINNLANELVRGTGMYNQTSFESMAGLTWTTTPPSG" XX SQ Sequence 6375 BP; 1846 A; 1186 C; 1551 G; 1792 T; 0 other; gtatttttta ctacaacatt taccaacaac aaacaaacaa caacaacatt acattacttt 60 taacaactac aatggcatac acacaaaccg cgtcatccgc cgctctcctg gacactgtcc 120 gtggtaacaa taccatggta aatgacctgg cgaaacggcg gttgtacgac actgcggtag 180 aggaattcaa tgcaagggac cgcaggccca aggttaattt ttcaaaagta gtgagcgagg 240 aacaaacgct cattgcaact aaggcttacc ccgaattcca aatcacgttc tacaacacgc 300 agaacgccgt ccattctttg gccggcggtc ttcgatcttt ggagttagag tacctcatga 360 tgcaagtacc gtacggttcg ctgacctacg atatcggcgg gaacttcgca tctcatttgt 420 tcaagggcag agactatgtg cattgctgca tgcccaatct ggacgtgcgc gacataatgc 480 ggcacgaagg tcaaaaggat agtatcgagc tttatctatc aagacttgaa agaagcaaga 540 aaactgttcc agcttttcag aagtccgctt ttgataagta cgcagaagtc aaagatgaag 600 tagtctgcca cgatactttc caaacgtgta agcatcgtca ggatgcttat accggaagag 660 tgtatgccat tgctttgcat agcatatacg acattccagc agacgagttc ggcgcggcac 720 ttttaaggaa agatgtacat gtttgttatg ccgctttcca cttttcagaa gatcttctcc 780 tagaagactc acacgcgaat ctcgatgaaa tcaacgcgtg tttctcaagg gatggcgata 840 aattgtcttt ttctttcgca tctgagagta cccttaatta tgtgcatagt tttagtaatg 900 tcttaaagta tgtttgtaaa acttatttcc cagcatctaa tagagaagta tatatgaagg 960 agtttttagt taccagggtc aatacctggt tctgcaagtt ttctagaata gatactttct 1020 tgttgtataa gggtgtggcg catagagcca cggattctga gcagttttat gctgcaatgg 1080 aggatgcatg gcactacaag aagacacttg cgatgtgcaa tagtgagaga attctattgg 1140 aggattcttc gtcggttaac tattggtttc cgaagatgcg agatatggtc attgtgcctc 1200 tctttgatat atctttggag actaacaaga gaacccgcaa ggaggtctta gtttcaaagg 1260 acttcgtcta cacggtgctc aatcacataa ggacatacca agcaaaggct ttgacgtata 1320 ccaatgtttt gtctttcgtc gaatcaattc gttcgagagt cattataaac ggtgtaacgg 1380 ctcggtctga atgggatgta gataagtcgc tcctacaatc gttgtccatg acttttttct 1440 tacacacgaa acttgcagta ctgaaggacg atcttatgat cagcaagttt acgctaggca 1500 ctaaatcagt gtcgcagtat gtgtgggatg aagtcacaat tgcatttggc aacgcattcc 1560 catcaatcaa ggaaagattg ataaacaggc gtctcataac agtttctgag caggctttag 1620 aaataacggt tcccgactta tatgtgactt ttcacgatag gttagttact gagtacaagc 1680 aatctgttga gatgcccggt ctggatatca ggaagaagat ggaagaaact gagcagatgt 1740 acaacgcatt gtctgagatt tctgttctta agaattcgga caagttcgac gttgatgttt 1800 tttcccagat gtgttgcacg ctcaatgttg acccgatggt agcagctaag gttatggtag 1860 ctgttgtgag taatgagagt ggtcttactc tgacttttga gaaaccaact gaggctaatg 1920 tggctatggc actacaagat tctgtcagtg cttcggatgg tgcaatggtt ttgacttcga 1980 gagatattga agaaccttct atgaagggtt caatggcaag aggtgagttg caattcgctg 2040 gtttgactgg tgatataaca gaaacatcct ttacaaagaa cgaggagatt gagtccttgg 2100 cgcagtttca catggcaaca gcgagttcgt tgatcaaaaa gcagatgtgt tcgatcgtgt 2160 acacaggccc cttgaaagtt caacagatga agaactatat agatagcctg gtagcctcgc 2220 tctctgctgc tgtctcgaat ctcgtgaaga tcctgaagga tactgcagct attgaccttg 2280 aaactagtca gaagtttggg gtttttgatg tggccatgaa gaagtggcta attaaaccat 2340 ctgccaagaa tcatgcatgg ggagtcgtcg agactcaaga gaggtcgtat catgttgcac 2400 ttctggagta caatggttca gagattgtga tgtgcgagaa ttggagaaga atcgcagtga 2460 gcgctgaatc ggtggtatac tctgatatgg cgaaacttaa gacactgaga ggcttactgc 2520 gcaatggaga accacatgtc agcacagcca aggtagtgct tgtggacgga gtaccaggat 2580 gtggtaagac gaaggagatt ctttctaagg tcaacttcga tgaggatttg atactcgtcc 2640 caggtaggca agctgccgaa atgatcagaa gaagagcaaa cgctactgga atactcgtgg 2700 caacaaaaga taacgttcgc actgtagatt cgttcataat gaattacggt aagaacgcga 2760 gatgtcaatt caaaaggctg ttcgttgatg agggtcttat gctgcacact ggttgtgtga 2820 atttcttagt ttcgatgtca ctgtgcgacg ttgcatacat atatggtgac acgcaacaga 2880 ttccatacat caacagagtt actggatttc cgtacccgga acacttttcg aagttggaag 2940 ttgacgaagt ggagacaaga cgtacaacgt tgcgttgtcc ggctgatgtc actttcttct 3000 tgaatcagaa gtacgaaggg caagtgatgt gcacttcaag tgagaagagg tctgttagtc 3060 aagagatggt taagggcgct gctgctatta atcctgtctc taaaccaatg aaaggaaaaa 3120 ttctcacttt tactcagttt gacaaagatg ctttgctgtc cagagggtat gctgatgttc 3180 atacagtgca tgaagttcaa ggagagacat accctgatgt ttcgctggtt aggttgacgc 3240 cgacaccagt gtcgatcatt gcaagggaaa gtccgcatgt gttggtagcg ctgtccaggc 3300 atacaaagtc tttaaagtac tacacagtag ttatggatcc tttagttagt ataattcgtg 3360 atttagagcg agtaagtact tttcttttag atatgtacaa agtagatgct ggtgtgcaat 3420 agcaattaca ggtcgactcg gtattttcag ggacaaatct cttcgtggct gccatgcagt 3480 tttactatga caagtgtctc cctggtaaca gttcattgtt taacgacttt gacgctgtta 3540 ccatgaagct gactgacatt tctttaaatg tcaaagactg cacgttggat atgtctaagt 3600 ctgtggcaca gcctagagag aaggttggag caccgttgat tcccgtggta cgaacggcag 3660 cagaaatgcc tcgccagact ggactattgg aaaatttggt agctatgata aaaagaaact 3720 ttaactctcc ggagttatca gggattgttg acatagagaa taccgcgtca cttgtagttg 3780 ataggttttt tgatagttac atgcttaaag aaaaaagaaa accaaataaa aatgtttcaa 3840 tgttctcaag ggagtctctt aacagatggt tagctaagca agaacaggtc acgatcggtc 3900 aattgactga tttcgacttt gttgatttgc cagcggttga tcaatacaga catatgatta 3960 aggcacagcc gaaacagaag ttggacttgt caattcagac tgagtacccg gctctgcaaa 4020 cgattgtgta tcattcgaag aagatcaacg caatctttgg tcctttgttc agtgagctta 4080 caaggcagtt actcgatagt atagactcta gcaggttctt gttctttact agaaaaactc 4140 cggaacagat tgaagaattc ttttcagatc tcgacagtca cgttccaatg gatatcttgg 4200 agttagatgt gtcaaagtat gacaagtctc agaacgagtt tcactgtgct gttgagtacg 4260 aaatttggag aaggctagga tttgaagatt ttttggctga agtttggaag caagggcata 4320 ggaaaaccac cttaaaggat tatacggcag gaataaaaac ttgcttgtgg tatcaaagga 4380 agagtggtga cgtgactacc tttataggaa atacagtgat aatcgccgct tgtctggctt 4440 cgatgttacc catggagaag gtgatcaaag gtgcgttttg cggggatgac agtttactgt 4500 acttcccaaa gggctgcgat tttcctgatg tgcaacaaag tgcaaatttg atgtggaatt 4560 tcgaagcaaa actgtaccgg aaaacttatg ggtacttctg tggaaggtac gttatacatc 4620 atgatagagg ctgtattgta tattacgatc ccttaaagtt gatatcgaaa cttggtgcta 4680 aacacatcaa ggatcgagag cacttagagg agttcagaag atctctatgt gatgttgcta 4740 gttcattgaa caactgtgcg tattacggac agttggacga tgctgtaggg gaggttcata 4800 agaccgcccc tcctggttcg tttgtttata aaagtttagt caagtttttg tctgaatggc 4860 aattgtagta aaggataagg tcaatgtcaa tgatttcatc aacctgtcaa actcagaaaa 4920 gtatcttccg tcaaactcag aaaagtatct tccgtcgttg atgacaccgg ttaagagtgt 4980 gaggatttca aaagtcgata aggttttagc tcgcgagaac gagactttgt ccgaagtcga 5040 cttgttgaaa ggtgtaaaat tgattgaggg tggttacatt tgcttagctg gtcttgtggt 5100 gaccggagaa tggaaccttc cagacaactg caccggtggt gtgagcgtct gtttggttga 5160 taaaaggatg gaaagagcaa gtgaagcaac tctcgggtca tattacactg gtgctgcaaa 5220 aaagcggttt cagtttaagg tgaccccgaa ttacagtgtc acaaccgatg atgctaagaa 5280 aaatatatgg caggttcttg ttaacattaa aggtgttaga atgagtgcgg gtttctgtcc 5340 gctttctttg gaatttgtgt ctgtgtgtat agtttttaaa aataatataa aattgggttt 5400 gagggagaag attacaagag taaccgacgc cgggcctatg gaacttactg aagaagttgt 5460 tgatgagttc atagagaatg tcccgatggc ggcaaggctt gcaagatttc gaaccaaatc 5520 ctcaaaaaca ggtccgaaaa agttcgttag gaacagtaga gatagtaagg ttagaagtaa 5580 taatttgaac agaggggtcc gtccaaagtt tgaagaagag gggattgtga gtgataagtt 5640 aattaatgac gagtccgagt cgatagacgc ggattccgat tcgtacttat aattatgtct 5700 tatactgtca actcaccgtc tcagcttgtg tatctctcgt ccgcttgggc tgacccaacg 5760 gacttactta atttgtgtac taactcgctt ggaaatcagt ttcaaacaca acaggctaga 5820 acaactgttc aacagcaatt cagtgatgtg tggaagccga cgcctcaggc gggtgtaagg 5880 ttcccggcta gcgggtttaa agtttatagg tataatgctg tcttagatcc tcttattact 5940 gctttactag gtacttttga tacccgtaat agaataatag aagtcgaaaa tcagcagaat 6000 ccgacaaccg cagaaacact cgatgcaact cgtagagttg acgatgcgac tgtggcaata 6060 agatctgcaa taaataattt agctaatgag ttagtgcgtg gaacagggat gtacaaccaa 6120 acctctttcg agagtatggc cggacttacc tggactacta cacctccatc aggttagaat 6180 tgtagaaata ataaatgatt tgtatccata agatacacgt ggtacacacg atagtgtata 6240 gtgtttttcc ctccacttaa atcgaagggt agtgtcttgg aacgcgcggg tcaaatataa 6300 gtggttcact tatatccgta ggcacgaaaa attgcgtggg attcgaattc ccccggaacc 6360 cccggtaggg gccca 6375 //