ID DQ352195; SV 1; linear; genomic RNA; STD; VRL; 4986 BP. XX AC DQ352195; XX DT 25-APR-2006 (Rel. 87, Created) DT 10-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Citrus leprosis virus C RNA-2, complete sequence. XX KW . XX OS Citrus leprosis virus C OC Viruses; Riboviria; Kitaviridae; Cilevirus. XX RN [1] RP 1-4986 RX DOI; 10.1099/vir.0.82038-0. RX PUBMED; 16894213. RA Locali-Fabris E.C., Freitas-Astua J., Souza A.A., Takita M.A., RA Astua-Monge G., Antonioli-Luizon R., Rodrigues V., Targon M.L.P.N., RA Machado M.A.; RT "Complete nucleotide sequence, genomic organization and phylogenetic RT analysis of Citrus leprosis virus cytoplasmic type"; RL J. Gen. Virol. 87(Pt 9):2721-2729(2006). XX RN [2] RP 1-4986 RA Locali E.C., Freitas-Astua J., Souza A.A., Takita M.A., Astua-Monge G., RA Antonioli-Luizon R., Rodrigues V., Targon M.L.P.N., Machado M.A.; RT ; RL Submitted (04-JAN-2006) to the INSDC. RL Biotechnology Laboratory, CAPTACSM-IAC, Rod. Anhanguera km 158, RL Cordeiropolis, SP 13490-970, Brazil XX DR MD5; 35163c0437ade611f2ed53f78830361b. DR EuropePMC; PMC4926173; 27275832. XX FH Key Location/Qualifiers FH FT source 1..4986 FT /organism="Citrus leprosis virus C" FT /segment="RNA-2" FT /host="Citrus sinensis var. Pera" FT /isolate="Cordeiropolis" FT /mol_type="genomic RNA" FT /country="Brazil" FT /db_xref="taxon:347219" FT gene 67..459 FT /gene="p15" FT CDS 67..459 FT /codon_start=1 FT /gene="p15" FT /product="p15" FT /db_xref="UniProtKB/Swiss-Prot:Q1KZ57" FT /protein_id="ABC75823.1" FT /translation="MLNWSTIEWDSFWQQHDCGCFTFECDFITSIDPLVHDYAIYHSLS FT QKTVLEMLQTHLVAGPDASETIRRQVAFLIYDFHRLSCNCDKCYGDCNATTTGRFKVVD FT RVLNDHIEFGIMRRQDLIPILHNLET" FT gene 1590..3203 FT /gene="p61" FT CDS 1590..3203 FT /codon_start=1 FT /gene="p61" FT /product="p61" FT /db_xref="GOA:Q1KZ56" FT /db_xref="UniProtKB/Swiss-Prot:Q1KZ56" FT /protein_id="ABC75824.1" FT /translation="MALFQLFSFLNVTLGLVSNIYNSTGHLSIDKACSGYSTEVFKGVC FT LPSYSYVKVDRHILTKDDRYYLGYAKATNREYQLYSLHIGTYDLFGSDIMSCGARGYAL FT GLHNGDLELVLNYCRKVDGQKHIGEVFQSCRFVEYSEHMISGIVHSIPKDLMEEFSPIG FT KVPYFGIMPFRTECADQCSTKQAFYAMDAYPFYNIGYWFPLCADKYIPLCYSGRTDPCP FT LGYEERLIKVHSYMEGFESGMKTVCKSGEYIFPAWYSGQSEIYDTVVKPYIVNVPEYCG FT RFSRSDKSLVYSRFGFRGTIFSGLKVITLDGIDYLTTDFCVNYSMHHYVKPLVFERMRK FT SFICTSSGCLYKGFDVNHLHDICTPKLIVKRHEALISSFSFINTLGTKVGAVPYDFDGN FT IIQFIDVFSIDGFYVYSLSHKKIQTLTVMLVQSEEEWYMKLLHFVADDILRECLSTVFK FT VLFSAISACLSFIIDVGGCCFRQFIFVCLDSVILLLLLLPNYTHLTFILGFTLNAYIQL FT VYYESCCFRAYRDIAETIDL" FT gene 3228..4121 FT /gene="MP" FT CDS 3228..4121 FT /codon_start=1 FT /gene="MP" FT /product="putative movement protein" FT /db_xref="GOA:Q1KZ55" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/Swiss-Prot:Q1KZ55" FT /protein_id="ABC75825.1" FT /translation="MALSTNNNSSHVGADDFLELENILSSEYNEEGIFKTSKTVCIRTD FT KRIGVGFLTPNDMISRLVGFINRKAEDAGVRSVESFRQISDVVLIIVPQIALPAELSLK FT LVDSANILEAVNDQEVTVNSTGGPCVVVMNCAHSIPNEDRTHVNGSEVHRRLGIQYQVD FT CDNISGRVTTFSITALWREAFSFRPSFYKVSDPLVVPISVGFRKAVIAKSHADLQRSIG FT RGLIVTHHSSESSVTSESPIDLTVKKSTGLKIRDKSEDDNQRKHPVPLTSSNNKLKTLR FT VSTTPIVNGRSTSTSE" FT gene 4093..4737 FT /gene="p24" FT CDS 4093..4737 FT /codon_start=1 FT /gene="p24" FT /product="p24" FT /db_xref="GOA:Q1KZ54" FT /db_xref="InterPro:IPR032441" FT /db_xref="UniProtKB/Swiss-Prot:Q1KZ54" FT /protein_id="ABC75826.1" FT /translation="MDAQLLQANKRLLRRAANVRQRYKMLATESFVADIKQILLRFIQK FT PNVIIMYISVLVLFAAHIDSNTHDILDDLAAQFPNNTFIEWAKSNFFRICGALVFIPVI FT IDTEEKHRNYLALVIFVFLMGFPQRSIMEYFIYSISFHVYAKAKHPVTRIFIIGAAVFS FT CVMFGIFTNEQLRKLYAELPKVPTHPVAVNRVEKVANRASRVSTEGTVNFG" XX SQ Sequence 4986 BP; 1280 A; 904 C; 1116 G; 1686 T; 0 other; gataaatcta atcaatctat tgtattgttc taggctaata actctcaatt attagtgaac 60 attacaatgc tgaactggtc tacgattgag tgggacagtt tctggcaaca gcacgattgc 120 ggttgcttta cgttcgagtg tgattttatt acctctatag atccactcgt gcatgattac 180 gcgatttatc attctttatc tcaaaagact gttctcgaga tgcttcagac gcacttggtt 240 gccgggccag atgcatctga aacaattcga agacaagttg cctttctcat ttatgacttt 300 cacaggttat cctgtaattg tgataaatgt tatggggatt gcaatgctac cactaccggt 360 agattcaagg tggtcgatcg tgttttgaac gatcacattg aattcggtat tatgcgtcgt 420 caagacctaa taccgatact gcataatctt gagacttaat tgtcatctcg ctagcacatg 480 tttgtggggt atgacgagta ctaattcaag gtgcggggct acgccttatg attttgtcga 540 ctttcgcgtg ttgacaactt cattactggt cttaaaccgc ttaatcccaa tgcggggact 600 tgtgtttgtc atttgccata cttcacaaac atgtgctagc aagtgaatac atatgtttgt 660 acactgtatc atttgtttca tgagctgttt cagtcgggca tagtataaat aagagcgcaa 720 gggaagggac tgcgcatact aatacggctg ttcgagctca tgttgcttgt gagtcatagg 780 tagtcaacgc aggatttgtc tgcaatatcc acggatcaag ggaaattgcg tggagatcat 840 gtacggagac ggcactacgc tgtataggat cttgagggat caaaccagcc ttaatccgct 900 tgccccaatg cggggacgtg tatgtattga agcgcggttt cctacgagaa gcggattgcg 960 ttgacatatt cttgactatc atgattgatg gagcttttgt ttaaccatgt agtacttgga 1020 cggaacggtg catcgccttg aggtaaggtc ataaagccga ttgccccaat gcggggacgt 1080 ccattgtatg aagcggggcg acaaagtttt cacttacagt ttacatcacc tgtatttcac 1140 tttaagtata ttggtcattt gattgctatt tgacttgtca tatagttatc acttgacctt 1200 tgaactaata cagcgagtat tgaacgctgg tacgtatact attagggttt agtcctaata 1260 gtattcattt tcaaccactt tcaatattct ttgttttcat tgaatattga taattgttag 1320 atttattgct agggcttagc cctagcagta ttcatcttca accaccttca atattctttg 1380 cttatgccac gagtcacata tgatttgaga tgaattgtag ttgtgactac atgtaaccat 1440 aattgatttg ggagcgttgg cttccaggtt gatgccgacc ggtttgtata tattgtaaat 1500 gttgtaaata cagtttcata cgtacgtgcg gaacagtttg ctgtaaatac gagagcctac 1560 agcaaattaa gctaaaatag tattgtcaaa tggcgctatt tcagcttttt agtttcttaa 1620 atgttacgtt ggggctcgta tccaacatct acaatagtac gggacacctt agtattgata 1680 aagcctgttc ggggtacagt actgaggtgt tcaagggcgt ttgtctgccc tcgtatagtt 1740 atgtcaaggt tgatagacat atcttaacga aggacgatag gtactatctt ggttacgcta 1800 aggccacaaa tcgtgaatac cagttgtata gtttacatat tggtacctac gatttgttcg 1860 gtagtgatat catgtcatgt ggtgctaggg gctatgctct gggtctccac aacggagacc 1920 ttgagttggt tcttaattat tgccgtaagg tcgatgggca gaagcatatt ggtgaagtgt 1980 tccaaagttg tagattcgtt gagtatagcg aacatatgat ttctggaatt gttcactcga 2040 tacctaagga cttaatggaa gagtttagtc caataggcaa ggtaccgtat ttcggtatca 2100 tgccttttag gactgagtgc gcagatcaat gttctactaa gcaagcattt tatgcaatgg 2160 atgcttatcc tttttataac attggctact ggtttccatt atgtgctgac aagtatatcc 2220 cactatgtta cagcggtcgt acggatccat gtccacttgg atatgaggag aggcttataa 2280 aagtccactc atatatggag gggtttgagt ctggtatgaa gaccgtttgt aaatctggtg 2340 aatatatttt tccagcctgg tactcaggac aatcagagat atatgatacg gttgttaaac 2400 cgtatattgt taatgtccct gaatattgtg ggcgatttag tcgctctgat aagtccttgg 2460 tttattccag gtttggtttt agagggacta tcttttctgg gcttaaggtt attacattag 2520 atggtattga ttatttgacc acagatttct gtgtcaatta ttctatgcat cattatgtaa 2580 aaccgctggt ttttgaaagg atgcggaagt cctttatttg cacctcgtct ggttgtttat 2640 ataaaggctt tgatgttaat catcttcatg acatttgtac acctaaattg attgtgaaac 2700 gtcatgaggc tttgatttct tccttttctt tcataaacac tctcggtacc aaagtgggtg 2760 ctgttcctta tgattttgat gggaatatca tacagttcat cgacgttttt agcatcgatg 2820 ggttttatgt ttactcgttg agtcacaaga agatccaaac tctcacagta atgctcgttc 2880 agtctgaaga agagtggtat atgaagttgt tgcattttgt tgcggacgac atacttaggg 2940 aatgtttgag tacagtcttt aaagtattgt tttccgctat tagtgcttgc ctatccttca 3000 ttattgatgt tggtggatgt tgcttccgcc aattcatctt tgtttgtttg gattctgtga 3060 ttttgttatt gctactgctc ccgaattaca cccatttaac gtttatctta ggatttacgc 3120 tgaatgctta catacagttg gtgtattatg agagctgttg ttttagagct tatcgcgaca 3180 tagctgaaac cattgatttg taaatcaatg gtgaatttta tgttgagatg gctctttcta 3240 ccaataacaa ttcttctcac gttggtgctg acgatttttt ggaattggag aatatcttat 3300 cctccgagta taatgaggag gggatattca agacttcaaa gaccgtttgc attcggactg 3360 acaagcgtat tggcgttgga tttctgacac cgaacgatat gatttctcgt ttggttgggt 3420 tcataaaccg taaagctgaa gacgctgggg ttagatctgt ggagtctttt aggcagatat 3480 ctgatgtcgt gcttataatt gtgccgcaga tagcgctccc ggccgagctg tcgctaaagc 3540 ttgtcgattc agctaatata ctagaggctg ttaatgacca agaggtcact gtcaatagta 3600 ctggtggtcc atgtgttgtt gtcatgaact gtgcccattc gattccgaat gaggacagga 3660 ctcatgttaa tggatctgaa gttcacaggc ggcttggtat acagtatcaa gttgactgtg 3720 ataatatttc aggtcgtgta acaacctttt cgatcactgc actatggcgc gaggcttttt 3780 cgtttcgacc atccttttat aaggtgtcgg atcctcttgt ggtcccaata tctgtgggct 3840 ttcgcaaggc agttattgcg aaatcacatg cagatttaca aaggtccata ggtagaggtt 3900 tgattgtcac tcaccactcc tctgaatcgt cagtcacgtc ggagagtccg attgacttga 3960 cggttaagaa gagtactggt cttaaaatac gagacaagag tgaggatgat aatcaaagaa 4020 aacatcctgt tccattgacg tcaagtaata ataagcttaa aactttaaga gtatcgacga 4080 cgccaattgt gaatggacgc tcaacttcta caagcgaata aacgcctctt gaggcgcgca 4140 gctaacgtta ggcaaagata taagatgttg gcaacggaaa gtttcgtcgc tgacatcaag 4200 cagattttgc ttaggtttat acaaaaacct aacgttataa ttatgtatat cagtgttttg 4260 gttctatttg ctgcgcatat agactcaaac actcatgata ttcttgatga tttggctgcg 4320 cagtttccta ataacacctt tattgagtgg gcgaagagta acttcttcag gatctgtggt 4380 gctctggtat ttataccagt tattatagat actgaagaga agcacaggaa ttaccttgct 4440 ttagttatat tcgttttcct tatgggtttt ccacaaagat cgattatgga gtatttcata 4500 tattccatat ctttccatgt gtatgctaag gctaaacacc ctgtcactcg gatttttatc 4560 attggggcag ccgtgttttc atgcgttatg tttggcatat ttaccaacga acaattgagg 4620 aagctttatg ctgaactccc gaaggtgcca actcatcccg tagctgtgaa cagggttgaa 4680 aaagttgcca atagggcttc tagggtgtct actgaaggca ccgtcaactt tggttgacac 4740 ctactggtgt tatgcggagg gttttcttgc ggttctttcc ctcactatat gttttgaatc 4800 gctaatctct ggtacttttt gtattgaaga ttatttgaac tatgttcagt ccggtcgttg 4860 tcagctgggc gaggttgaaa ttcctcaagt ttgattaatt tctagtctct tctagctggt 4920 ggtgtaccac tttttctttt ttgattttct tttcttttgt ctttatgaca aaaaaaaaaa 4980 aaaaaa 4986 //