ID   DQ347950; SV 1; circular; genomic DNA; STD; VRL; 2604 BP.
XX
AC   DQ347950;
XX
DT   29-JAN-2006 (Rel. 86, Created)
DT   13-MAY-2025 (Rel. 144, Last updated, Version 2)
XX
DE   Rhynchosia golden mosaic virus isolate Soybean 1068 segment DNA-A, complete
DE   sequence.
XX
KW   .
XX
OS   Rhynchosia golden mosaic virus
OC   Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes;
OC   Geplafuvirales; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2604
RA   Mauricio-Castillo J.A., Mendez-Lozano J., Perea-Araujo L.,
RA   Arguello-Astorga G.R.;
RT   "A new strain of Rhynchosia golden mosaic virus isolated from soybean and
RT   weeds in Sinaloa, Mexico";
RL   Unpublished.
XX
RN   [2]
RP   1-2604
RA   Mauricio-Castillo J.A., Mendez-Lozano J., Perea-Araujo L.,
RA   Arguello-Astorga G.R.;
RT   ;
RL   Submitted (02-JAN-2006) to the INSDC.
RL   Molecular Biology, Instituto Potosino de Investigacion Cientifica y
RL   Tecnologica, A.C., Camino a la Presa San Jose 2055, San Luis Potosi, SLP
RL   78231, Mexico
XX
DR   MD5; 6611107e82415e42f5274a8e2319d211.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2604
FT                   /organism="Rhynchosia golden mosaic virus"
FT                   /segment="DNA-A"
FT                   /strain="Sinaloa"
FT                   /isolate="Soybean 1068"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /db_xref="taxon:117198"
FT   gene            187..942
FT                   /gene="AR1"
FT   CDS             187..942
FT                   /codon_start=1
FT                   /gene="AR1"
FT                   /product="coat protein"
FT                   /note="CP; capsid protein; encapsidation of viral genome;
FT                   AV1"
FT                   /protein_id="ABC74550.1"
FT                   /translation="MPKRDAPWRLMAGTSKVSRSANYSPGAGTGPKSNRASAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVTHVGKVLCISDITRGSGITHRVGKRF
FT                   CVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
FT   gene            complement(939..1337)
FT                   /gene="AL3"
FT   CDS             complement(939..1337)
FT                   /codon_start=1
FT                   /gene="AL3"
FT                   /product="replication enhancer protein"
FT                   /note="REn; AC3"
FT                   /protein_id="ABC74553.1"
FT                   /translation="MDSRTGEPITAPQATNGVFIWEVPNPLYFKIIRVEVPLHTHSKVF
FT                   HIQIRANHNLRRALDLHKAFFNFQVWTTLTTASGQIYLSRFKLLVMSYLDNLGVISVNN
FT                   VIRAVAFATDKHYVSDVLENHEIKYKIY"
FT   gene            complement(1084..1500)
FT                   /gene="AL2"
FT   CDS             complement(1084..1500)
FT                   /codon_start=1
FT                   /gene="AL2"
FT                   /product="transactivation protein"
FT                   /note="TrAp; transcriptional regulator of late genes;
FT                   silencing supressor; AC2"
FT                   /protein_id="ABC74552.1"
FT                   /translation="MTGHNKTPSSSPLRNRSSPLSIKAQHRYAKRQTRRKRIDLQCGCS
FT                   IYVHINCANHGFTHRGTHHCASSNEWRFYLGGSKSPIFQDNQSGGPITHAQQGLPHSNQ
FT                   SQPQPTESVGSPQSLLQFPSLDDIDDSFWADLFK"
FT   gene            complement(1394..2470)
FT                   /gene="AL1"
FT   CDS             complement(1394..2470)
FT                   /codon_start=1
FT                   /gene="AL1"
FT                   /product="replication initiation protein"
FT                   /note="Rep; RCR-initiator protein; rolling-circle
FT                   replication initiator; AC1"
FT                   /protein_id="ABC74551.1"
FT                   /translation="MPLPKRFRLNAKKYFLTYPQCSISKEEALEQIQRLSTPVNKKFIK
FT                   ICRETHEDGQPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   DKDGDTIEWGEFQIDGRSARGGQQSANDTYAKALNATSAEAALQIIKEEQPQHFFLQFH
FT                   NLITNANRIFQKPPEPWVPPFQQSSFNNVPPIITQWVNQNVCDSAARPLRPISIVIEGP
FT                   SRTGKTQWARSLGPHNYLCGHLDLNQKIYSNNAWYNVIDDVNPHYLKHFKEFMGAQRDW
FT                   QSNCKYGKPIQIKGGIPAIFLCNPGPHSSYKEYLSKEKNKSLNDWAQQNAIFITIEEPF
FT                   FTTVDQGSTQIRQETNEA"
FT   gene            complement(2056..2319)
FT                   /gene="AL4"
FT   CDS             complement(2056..2319)
FT                   /codon_start=1
FT                   /gene="AL4"
FT                   /product="AL4"
FT                   /note="AC4"
FT                   /protein_id="ABC74554.1"
FT                   /translation="MKMGNLIYTCSYSSKENSSARITDSSTWYPQPGQHISIRTYRELN
FT                   PAPTSSPTSTRMETQLNGESSKSTADQLEEVSNLLMTHTQRH"
XX
SQ   Sequence 2604 BP; 624 A; 505 C; 648 G; 827 T; 0 other;
     accgttggcc gaccggtgcc acgcgccccc ctccgtacaa ctttattttg aattaaagat        60
     aattcttttg tgtagtccaa tgatattgcg tctggcgagt ctagttatcc gttccaactt       120
     agtgcgcaag ttgttgattg tccgctattt aaattgaaat tgtggagcca ggttctttaa       180
     ttcaaaatgc ctaagcggga tgctccgtgg cgtttgatgg cggggacctc aaaggtgtcc       240
     cgttctgcca attattctcc tggtgcgggt acgggcccta aatcaaatag ggcctccgct       300
     tgggtgaata ggcccatgta caggaagccc aggatttatc ggatgtacag atcccccgat       360
     gttccgaaag ggtgtgaagg gccttgtaag gtccaatcgt ttgaatcacg acatgatgtt       420
     acccatgttg gtaaggtcct ttgtatatcc gatattacac gtggtagtgg tattacccac       480
     cgcgttggta agcgtttctg cgtgaagtcc gtgtatatcc taggcaaagt atggatggac       540
     gagaacatca agttgaagaa ccacaccaac agcgtcatgt tttggttggt gagggatagg       600
     agaccatatg gtacccctat ggattttggc caggtgttca acatgtttga caatgaacct       660
     agtaccgcta ctgttaagaa cgatttgcgt gaccgttttc aagttatgca taagttctat       720
     gccaaggtta cgggtggaca gtatgcgagc aacgagcaag cgctggtgaa gcgtttttgg       780
     aaggttaaca attatgtggt gtacaatcat caagaagcgg caaagtacga gaatcacacg       840
     gagaacgctt tgttattgta tatggcgtgt actcatgcct ctaatcctgt gtatgcaact       900
     cttaaaattc gggtctattt ttatgactcg ataatgaatt aataaatttt gtattttatt       960
     tcatgattct cgagtacatc gcttacataa tgtttatctg tcgcgaatgc aacagctcta      1020
     attacattgt taactgaaat aacgcctaaa ttgtctaaat acgacattac aagtaatttg      1080
     aatctactta aataaatctg cccagaagct gtcgtcaatg tcgtccagac ttggaaattg      1140
     aagaaggctt tgtggagatc caacgctctc cgtaggttgt ggttggctct gatttgaatg      1200
     tggaagacct tgctgtgcgt gtgtaatggg acctccactc tgattatctt gaaatatagg      1260
     ggatttggaa cctcccaaat aaaaacgcca ttcgttgctt gaggcgcagt gatgggttcc      1320
     cctgtgcgtg aatccatgat tggcgcaatt tatgtggacg tatattgaac aaccgcactg      1380
     gagatcaatt cttttacgcc tcgtttgtct cttggcgtat ctgtgttgag ccttgatcga      1440
     cagtggtgaa gaacggttcc tcaatggtga tgaagatggc gttttgttgt gcccagtcat      1500
     tgaggctttt gtttttctct ttgctgagat actccttata tgatgaatgg gggccaggat      1560
     tgcagaggaa gatagcggga attcctcctt taatttgaat tggctttccg tatttgcagt      1620
     tcgattgcca atccctttgg gcccccatga actccttaaa gtgtttcaga taatgcggat      1680
     tgacgtcatc gattacgtta taccatgcat tattggagta gattttttga ttgagatcta      1740
     gatgaccaca taggtaattg tgagggccga gacttcgggc ccattgtgtt ttgcccgtcc      1800
     ttgatggtcc ctcaataacg attgatatag gtctcaatgg ccgcgcagcg gaatcgcaaa      1860
     cgttttgatt aacccattgc gtaattatcg gaggaacatt attgaacgat gactgttgaa      1920
     atggagggac ccatggttcc ggtggtttct ggaaaatcct gtttgcgttt gtgattaggt      1980
     tatgaaattg aagaaagaaa tgttggggtt gttcttcctt tatgatctgc agagccgctt      2040
     ctgcagatgt tgcgtttaat gcctttgcgt atgtgtcatt agcagattgc tgacctcctc      2100
     tagctgatct gccgtcgatt tggaactctc cccattcaat tgtgtctcca tccttgtcga      2160
     tgtaggactt gacgtcggag ctggatttag ctccctgtat gttcggatgg aaatgtgctg      2220
     acctggttgg ggataccagg tcgaagaatc tgttattcgt gcactggaat tttccttcga      2280
     actgtatgag cacgtgtaga tgaggttgcc catcttcatg tgtttctctg catatcttga      2340
     tgaacttctt gtttactgga gtcgaaaggc gctgtatttg ctcgagcgcc tcttctttag      2400
     atatggaaca ttgaggatat gtgaggaagt atttcttggc atttaagcga aagcgttttg      2460
     ggagtggcat tcttgtaata agaggggtgt acaccgattg gggctctctc aaactggctg      2520
     attgtatcgg tgtattggta tccaatatat agcttctttc ttggtatcac ttttgacacg      2580
     tgggaggcca acgtatataa tatt                                             2604
//