ID DQ347946; SV 1; circular; genomic DNA; STD; VRL; 2588 BP. XX AC DQ347946; XX DT 29-JAN-2006 (Rel. 86, Created) DT 29-JAN-2006 (Rel. 86, Last updated, Version 1) XX DE Tomato severe leaf curl virus isolate Rioverde-SLP1 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato severe leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2588 RA Mauricio-Castillo J.A., Monreal-Vargas C.T., de la Torre-Almaraz R., RA Alpuche-Solis A.G., Arguello-Astorga G.R.; RT "First Report of Tomato severe leaf curl virus in Mexico"; RL Unpublished. XX RN [2] RP 1-2588 RA Mauricio-Castillo J.A., Arguello-Astorga G.R.; RT ; RL Submitted (02-JAN-2006) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa San Jose 2055, San Luis Potosi, SLP RL 78231, Mexico XX DR MD5; 2786be41f9a5d42aa694449fb0e3d371. XX FH Key Location/Qualifiers FH FT source 1..2588 FT /organism="Tomato severe leaf curl virus" FT /segment="DNA-A" FT /isolate="Rioverde-SLP1" FT /mol_type="genomic DNA" FT /country="Mexico" FT /db_xref="taxon:92963" FT gene 185..940 FT /gene="AR1" FT CDS 185..940 FT /codon_start=1 FT /gene="AR1" FT /product="coat protein" FT /note="CP; capsid protein; encapsidation of viral genome; FT AV1" FT /db_xref="GOA:Q2L8C9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2L8C9" FT /protein_id="ABC74530.1" FT /translation="MPKRDAPWRLMAGTPKVSRSSNQSPRTGTGPKFDKAHAWVNRPMY FT RKPRIYRAWRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWRVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSVLN" FT gene complement(937..1335) FT /gene="AL3" FT CDS complement(937..1335) FT /codon_start=1 FT /gene="AL3" FT /product="replication enhancer protein" FT /note="REn; AC3" FT /db_xref="GOA:Q2L8D8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2L8D8" FT /protein_id="ABC74533.1" FT /translation="MDSRTGESITVDQAENSVFIWEVPNPLYFTIISVEDPIYTNTRIY FT HIQIRFNHNLRKALSLHKAYLNYQIWTTSVQVSGTNYLSRFKYLVLLYLNRLGVICINN FT VIRAVRFATDRSYVNHVLENHSIKFKFY" FT gene complement(1082..1468) FT /gene="AL2" FT CDS complement(1082..1468) FT /codon_start=1 FT /gene="AL2" FT /product="transactivation protein" FT /note="TrAp; transcriptional regulator of late genes; FT silencing supressor; AC2" FT /db_xref="GOA:Q2L8D7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2L8D7" FT /protein_id="ABC74532.1" FT /translation="MQNSSSSTPPSIKPKHKIAKSRIRRKRIDLNCGCSFYQHINCASH FT GFTHRGEHHCGSGREFRFYLGGTKSPLFHDNQCRRPNLHQHQDIPHPNTVQPQPQEGAE FT STQSVPQLPNLDDISSSFWDELLK" FT gene complement(1425..2456) FT /gene="AL1" FT CDS complement(1425..2456) FT /codon_start=1 FT /gene="AL1" FT /product="replication initiation protein" FT /note="Rep; RCR-initiator protein; rolling-circle FT replication initiator; AC1" FT /db_xref="GOA:Q2L8D6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2L8D6" FT /protein_id="ABC74531.1" FT /translation="MPRNPNLFRLAAKNIFLTYPQCDIPKDEAIEMLQNLPWSVVKPTY FT IRVAREEHADGFPHLHCLIQLSGKSNIKDARFFDLTHPRRSANFHPNAQAAKDTNAVQN FT YITKEGDYCESGQYKVSGGTKSNKDDVYHNAVNAASAGEALNIIRAGDPKTFIVSYHNV FT KANIERLFQKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRDAAARPERPISIIIEGES FT RTGKTMWARALGPHNYLSGHLDFNSRVYSNEAEYNVIDDITPQYLKMKHWKELIGAQKD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEASYKGFLEKEENKALKDWTLHNAKFIFLNSTL FT YQA" FT gene complement(2012..2377) FT /gene="AL4" FT CDS complement(2012..2377) FT /codon_start=1 FT /gene="AL4" FT /product="AL4" FT /note="AC4" FT /db_xref="UniProtKB/TrEMBL:Q2L8D5" FT /protein_id="ABC74534.1" FT /translation="MKLLKCFKICHGQSSNQRTYESPERNTQMDFRTSTVSSNSPGSPT FT SRMLDFSTSLTPEGLPIFIQTHRQPKTPTPSRITSPKKVIIVNPDNTKCLGVQNQTKTT FT STTTPSMQLVLERLSTL" XX SQ Sequence 2588 BP; 635 A; 556 C; 626 G; 771 T; 0 other; accggatggc cgcgtttttt ttggacctgg cccactatca gaaattgcgt tgggccttcc 60 tggataaagt taaccaatca gtacacgttt gggtagtcta attattacta acttggtcac 120 caagttgttt tatggtctat aaatttgtcg ttatgtgtgt ggtccaacca cgcaaatatt 180 gataatgcct aagcgtgatg ccccatggcg cttaatggcg ggtaccccta aggtgagtcg 240 gtcctctaac cagtctccgc ggactggtac tgggcctaaa tttgataagg cccatgcctg 300 ggtaaacagg cccatgtata ggaagcccag gatatatcgg gcttggagaa cgcccgatgt 360 tccaagaggc tgtgaaggcc catgtaaggt ccagtcctac gagcaacgac acgatatctc 420 ccatgtgggg aaagtcatgt gcatatccga tgtcacacgt ggtaatggta ttacccaccg 480 tgttggtaag cggttctgtg ttaagtctgt gtatatcctc ggtaagatat ggatggacga 540 gaacatcaag ctgaagaacc acacgaacag tgtcatgttc tggttagtca gggaccgtag 600 accctatggt acgcctatgg atttcggcca ggtgttcaac atgtttgaca atgagcccag 660 cactgccacg gtcaagaacg atctacgcga tcgttaccag gtcatgcaca agttctatgg 720 caaggtgaca ggtggacagt atgccagcaa cgagcaggct atagtcaagc gattctggag 780 ggtcaacaac catgtggtct acaatcacca agaggctggc aagtatgaga atcacacgga 840 gaacgcgttg ttattgtata tggcgtgtac tcatgcctct aaccctgtat atgctactct 900 taagatccgg atctattttt atgattcggt attgaattaa taaaatttga attttattga 960 atgattttct aatacatgat ttacatatga tctgtccgtt gcgaagcgaa cagctctgat 1020 aacattatta atgcaaataa cacctaacct atttaaatat aataagacta aatatttaaa 1080 tctacttaag taattcgtcc cagaaacttg aactgatgtc gtccagattt ggtagttgag 1140 gtacgctttg tgtagactca gcgccttcct gaggttgtgg ttgaaccgta tttggatgtg 1200 gtatatcctg gtgttggtgt aaattgggtc ttctacactg attatcgtga aataaagggg 1260 atttggtacc tcccagataa aaacggaatt ctctgcctga tccacagtga tgctctcccc 1320 tgtgcgtgaa tccatggctg gcgcagttga tgtgctggta gaacgagcag ccacagttta 1380 ggtctatcct cttacgacga atcctggatt ttgcaatttt gtgtttaggc ttgatagagg 1440 gtggagttga ggaagatgaa ttttgcattg tgtagtgtcc aatcttttaa tgctttgttt 1500 tcctcttttt cgaggaaacc tttatagctg gcctctcctg gattgcagag cacgattgac 1560 ggtattcccc ctttaatttg aactggcttc ccgtatttgc aatttgattg ccaatccttt 1620 tgggccccaa tcagctcttt ccaatgcttc atctttaaat actgcggagt gatgtcatca 1680 atgacgttgt actccgcttc atttgagtaa accctagaat tgaaatctag gtgtccactc 1740 aaataattgt gtgggcctaa ggcacgtgcc cacattgtct ttcccgtcct cgattcaccc 1800 tcgatgatta tacttatagg tctctccggc cgcgcagcgg catccctacc aaaataatca 1860 tctgcccatt cctgcatctc gtccggaacg ttcgtgaacg acgagagtgg aaacggagga 1920 acccagggtt ccggagcctt ctgaaagagc cgctcgatgt tagctttgac gttatggtag 1980 cttacaatga acgtcttggg gtctccggcc cttataatgt tgagagcctc tccagcacta 2040 gctgcattga cggcgttgtg gtagacgtcg tctttgtttg attttgtacc cccagacact 2100 ttgtattgtc cggattcaca ataatcacct tctttggtga tgtaattctg gacggcgttg 2160 gtgtctttgg ctgcctgtgc gtttggatga aaattggcag accttctggg gtgagtgagg 2220 tcgaaaaatc tagcatcctt gatgttggac ttcccggaga gttggatgag acagtggagg 2280 tgcggaaatc catctgcgtg ttcctctctg gcgactcgta tgtacgttgg tttgacgact 2340 gaccatggca gattttgaag catttcaata gcttcatctt tggggatatc acactgtgga 2400 tatgttaaga aaatattttt ggcagctagg cgaaataaat tagggttccg tggcattttt 2460 gcaaatatga gccaggacac cagggggagc tctctctaaa actttatttt gctggtgtcc 2520 tggtgtccca tttatactaa aaccctctgg ggacaccaag ggcaaattcg gccatccgca 2580 ataatatt 2588 //