ID DQ339157; SV 1; linear; genomic RNA; STD; VRL; 4268 BP. XX AC DQ339157; XX DT 02-MAR-2006 (Rel. 87, Created) DT 19-JUL-2006 (Rel. 88, Last updated, Version 2) XX DE Melon necrotic spot virus isolate MNSV-Al, complete genome. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-4268 RX DOI; 10.1099/vir.0.81793-0. RX PUBMED; 16847133. RA Genoves A., Navarro J.A., Pallas V.; RT "Functional analysis of the five melon necrotic spot virus genome-encoded RT proteins"; RL J. Gen. Virol. 87(Pt 8):2371-2380(2006). XX RN [2] RP 1-4268 RA Navarro J.A., Pallas V.; RT ; RL Submitted (21-DEC-2005) to the INSDC. RL Biologia del Estres, Instituto de Biologia Molecular y Celular de Plantas RL (UPV-CSIC), Avenida de los Naranjos, Valencia 46022, Spain XX DR MD5; 9599de3d817f1b094bb7ccc802506e4a. DR EuropePMC; PMC3147919; 21593169. DR EuropePMC; PMC4337425; 24372390. DR EuropePMC; PMC5356068; 28302791. DR EuropePMC; PMC5712577; 29238357. DR EuropePMC; PMC5954562; 29868081. XX FH Key Location/Qualifiers FH FT source 1..4268 FT /organism="Melon necrotic spot virus" FT /isolate="MNSV-Al" FT /mol_type="genomic RNA" FT /country="Spain:Almeria" FT /db_xref="taxon:11987" FT CDS 89..2464 FT /codon_start=1 FT /transl_except=(pos:893..895,aa:OTHER) FT /product="p89" FT /note="putative RNA-dependent RNA polymerase; produced by a FT readthrough of the amber codon" FT /db_xref="GOA:Q27YA5" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q27YA5" FT /protein_id="ABC67516.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE FT DAEEESDIGEEIVVGTIGIGIHANVNPEGRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNSSLANLRRGLIERVFFVEND FT KKELEPAPKPLSGAFDRLTWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALKWEHSVY FT LDAFCHDSHLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEIFEQLE FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGINHARKWVNAVGLCGLSLTGGIPV FT VQSYYNMMIRNTQSINSSGILRDVSFASGFRELARLGNRKSGAISEDARFSFYLAFGIT FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL" FT CDS 89..895 FT /codon_start=1 FT /product="p29" FT /db_xref="UniProtKB/TrEMBL:Q27YA4" FT /protein_id="ABC67520.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE FT DAEEESDIGEEIVVGTIGIGIHANVNPEGRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVN" FT CDS 2443..2640 FT /codon_start=1 FT /product="p7A" FT /note="movement protein" FT /db_xref="GOA:Q8V993" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q8V993" FT /protein_id="ABC67517.1" FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNF" FT CDS 2644..2829 FT /codon_start=1 FT /product="p7B" FT /note="movement protein" FT /db_xref="GOA:Q27YA2" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q27YA2" FT /protein_id="ABC67518.1" FT /translation="MACCRCDSSPGDYSGALLILFISFVFFYITSLSSQGNTYVHHFDN FT SSVKTQYVGISTNGDG" FT CDS 2816..3988 FT /codon_start=1 FT /product="p42" FT /note="coat protein" FT /db_xref="GOA:Q27YA1" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q27YA1" FT /protein_id="ABC67519.1" FT /translation="MAMVRRINNLPTVKLAKQALPLLANPKIVNKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI FT ASVLPSNDLTVNNGDVNVGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV FT DRKLVDFGQFLFATYSGAGDTAHGDLYVEYAVEFKDPQPIAGMVCTFDRSVSFSEVGST FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVS FT SSGASALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA" XX SQ Sequence 4268 BP; 1063 A; 892 C; 1066 G; 1247 T; 0 other; ggattactct agccggatcc ccgactctct tattttctgt aagttagttc gtgtattgat 60 tgtctgtctt gatcagtata ggttagcaat ggatactggt ttgaaatttc ttgtttctgg 120 gggtttagcc acctcatctg ttatcaggaa agtgagtgct gtgagttcat tggattcgtc 180 ccttccttca tcatctatat tatctgccat ccatgggtct tggactagtg ctatcagcca 240 cgattgtagt aaaattgcca aggttgccgc cgtagttggt attggttatc ttggggtcag 300 gattggtgcc gcttggtgcc gtcgtactcc cgggataacg aattccataa tcacctatgg 360 ggaagaagtg gttgagcaag tgaaggtaga tattgatgaa gatgctgaag aggagtccga 420 tattggtgag gaaattgtgg ttggcacgat aggcattggt atacacgcaa acgtcaaccc 480 tgagggtcga gctaagcgta gacatagatc gaggccattc attaagaaga ttgtgaattt 540 aacgaagaat cacttcggtg ggtgccccga ctctagtaaa tcgaacgtca tggctgtaag 600 caaattcgtc tatgaacaat gcaaacagca caattgtctt ccacatcaaa cgagattgat 660 catgagtatt gcagttccat tggtgctaag tcccgatatg tacgacattt ccagcaaagc 720 tctgttaaac agcgagatat tgacagaaaa cagagctacg ctggaccgcc tcaaaactct 780 tgatgggtgg ttaacacatt tggtgtgcca cccccttagc gcgaaggctt ggaggcgggc 840 aattgacaac ttgtgtggtc ttccagattg gaaggctttc aagttggtca actaggggtg 900 cctagaggag ctcgctgggt tctgtacttc ggtacggaga gggacacacc cagacatgac 960 cgagtttcct caggatcgtc ccattaagac acgcaaactg tattgtttag ggggagttgg 1020 aactagcgtg aagttcaacg tgcataatag ctctctagct aaccttcggc gcggtctaat 1080 tgagcgcgtt ttctttgttg aaaatgataa aaaggaacta gagcctgccc ctaaacctct 1140 tagtggtgcg tttgatcgct taacttggtt tcgtcggaaa ctccataata ttgtgggtac 1200 tcattccagt attagtccag gtcaattcct ggacttctat actggcagga ggcgcacgat 1260 ttatgaaggt gccgtgaaat cgttggaggg gttaagtgtt caacgaaggg atgcctatct 1320 gaaaacgttt gttaaagcgg agaagatcaa taccactaag aagcctgacc cagctccgcg 1380 ggttatacaa ccgaggaacg taagatataa tgttgaggtt ggtcgttatc tacgaaggtt 1440 tgagcattac ctctatcgag gaattgacga aatctggaat ggccccacca taataaaagg 1500 atacactgtc gagcaaattg ggaaaatcgc ccgtgacgct tgggactctt tcgttagtcc 1560 tgtagcaatc gggtttgaca tgaaaaggtt cgaccaacat gtatcctccg atgctcttaa 1620 atgggaacat agtgtttatc ttgacgcttt ttgccacgac tcacatctcg cagaattgtt 1680 agagtggcaa ttagttaata agggtgttgg gtatgctagt gatggaatga ttaaatataa 1740 ggttgatggg tgccggatga gtggtgacat gaatacagct atgggtaact gtttgattgc 1800 ctgtgctatc acgcatgatt tcttccgtag tcgtggtatc agggcgcgtt tgatgaacaa 1860 tggtgatgac tgtgtcgtaa tatgtgaaaa agaatgtgcc gcggtggtta aagccgacat 1920 ggtaaggcac tggagacaat tcgggtttca atgcgaactc gagtgcgacg cagaaatctt 1980 cgagcaactt gagttttgtc aaatgcgacc tgtgtacgac ggggagaaat acgtgatggt 2040 gcggaatcct ttggttagcc tatctaaaga ttcctactca gtcggccctt ggaatggaat 2100 caaccatgca cgcaagtggg ttaatgcagt tggcttgtgt ggcttatccc tcactggtgg 2160 aattcctgtt gtccagagtt attataatat gatgatccgc aacacccagt ccataaacag 2220 ttctggcata cttcgcgatg tcagctttgc tagtggattt cgggagttag cgcgattggg 2280 taacaggaaa agtggtgcca tatctgaaga cgcccgtttt agcttttatc tcgcatttgg 2340 cattactcca gatttacaac gtgccatgga aagtgactat gatgctcata ccatagagtg 2400 gggtttcgtg ccccagggaa atcctagaat acagccaatc tcatggactc tcaacgaact 2460 gtagaacaaa ctaatcctcg tggaagaagt aaagaacgtg gtgacagcgg gggaaaacag 2520 aagaactcaa tggggcgaaa gatagccaat gatgctatct ctgaatcgaa gcaaggagtt 2580 atgggtgcta gcacatacat tgctgataaa attaaggtga ctattaactt taacttttag 2640 tgtatggctt gttgccgttg cgactccagc cccggggatt actctggagc gttgcttata 2700 ttatttatct catttgtttt cttttatatt acctcgctta gctcgcaagg aaatacttac 2760 gttcatcact tcgataactc ttccgttaaa acacaatacg ttggcatctc tacaaatggc 2820 gatggttaga cgcattaata atttacccac agtgaagctt gctaagcagg ctctacccct 2880 gctagcgaac cctaaaattg taaataaagc tatagatgtg gttcctttgg tcgtccaagg 2940 tggtcagaaa ttgtccaagg ctgctaagcg attgcttggc gcttatggag gcaacatttc 3000 gtacactgag ggtgccaaac caggcgcaat atcagctcct gtcgctatta gtcggcgagt 3060 ggctggtatg aagcctaggt ttgttcgatc ggaaggatct gtgaagatag ttcataggga 3120 gtttattgcc tctgttcttc cttcgaatga tctcactgtt aataatggtg atgtcaacgt 3180 cggcaagtat agagtcaatc ccagtaataa cgctttattc acatggcttc agggacaagc 3240 gcaactatat gatatgtaca gatttactcg gctccgtttc acctatattc ctactaccgg 3300 atcgacttcc acgggtcgtg tttctatcct ttgggataga gattctcagg accccctccc 3360 tattgatcgt gctgccatta gctcttatgc tcattacgct gattcagcgc cttgggccga 3420 gaatgtccta gtggttcctt gtgataatac gtggaggtac atgaatgata ccaatgctgt 3480 cgaccggaag ttggttgatt ttgggcagtt ccttttcgct acttactctg gtgctggtga 3540 caccgcccat ggtgatcttt atgtcgagta tgctgtggaa ttcaaggacc cccagcctat 3600 cgctgggatg gtatgtacgt ttgatcgctc tgtttccttc tctgaagttg ggtctactat 3660 taagggagtc aattatattg ctgatcgtga tgtgataacc actgggggca atattggtgt 3720 taacatcaat attcccggga cttatctcgt cacgattgtt cttaatgcca catcgattgg 3780 ttccctcacc ttcactggta attctaaact tgtaggcaac agtcttaacg tttccagcag 3840 tggtgcatct gctcttacgt tcactcttaa ctccactggt gtgcccaaca gtagtaattc 3900 ttcattctct gtgggtaccg ttgttgcatt gactagggtg cgtatgacga tcactcgctg 3960 ctctccagaa acagcctacc tcgcctaatt tgatttattg tactccaaat ttggtctccc 4020 atattcctac ctgttctcag ccagatctct gttctggtgt cctataggca tccttgtcgt 4080 gtgtagtgcg gtctggctaa ccgtaacggc gtatcggctt ggctttccaa tgattaggct 4140 ccgggatgta cgacatagct gaagatggat ggagttcggt agaccaccgc tagcaaaata 4200 cactctgtgt ggggcgtgct agtggatagt catgtatgtt tgagatgggt tataggccca 4260 tcccgccc 4268 //