ID DQ336350; SV 1; circular; genomic DNA; STD; VRL; 2674 BP. XX AC DQ336350; XX DT 19-JAN-2006 (Rel. 86, Created) DT 22-JUL-2006 (Rel. 88, Last updated, Version 2) XX DE Tomato yellow spot virus segment DNA-A, complete sequence. XX KW . XX OS Tomato yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2674 RX DOI; 10.1111/j.1365-3059.2006.01395.x. RX AGRICOLA; IND43821638. RA Fernandes J.J., Carvalho M.G., Andrade E.C., Brommonschenkel S.H., RA Fontes E.P.B., Zerbini F.M.; RT "Biological and molecular properties of Tomato rugose mosaic virus (ToRMV), RT a new tomato-infecting begomovirus from Brazil"; RL Plant Pathol. 55(4):513-522(2006). XX RN [2] RP 1-2674 RA Calegario R.F., Ferreira S.S., Andrade E.C., Zerbini F.M.; RT "Biological and molecular properties of Tomato yellow spot virus (ToYSV), a RT new tomato-infecting begomovirus from Brazil"; RL Unpublished. XX RN [3] RP 1-2674 RA Calegario R.F., Ferreira S.S., Andrade E.C., Zerbini F.M.; RT ; RL Submitted (19-DEC-2005) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; b542d93397c2c9fecfa004295b7a103d. XX FH Key Location/Qualifiers FH FT source 1..2674 FT /organism="Tomato yellow spot virus" FT /segment="DNA-A" FT /isolate="[Brazil:Minas Gerais-Bicas2:1999]" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:365523" FT gene 263..1018 FT /gene="CP" FT CDS 263..1018 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q2LCU1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2LCU1" FT /protein_id="ABC68289.1" FT /translation="MPKRGPSWRPMVGTSKVSRTSNFSPRGGIGPKFNKASEWVNRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF FT CVKSVYILGKVWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1015..1413) FT /gene="Ren" FT CDS complement(1015..1413) FT /codon_start=1 FT /gene="Ren" FT /product="replication enhancer protein" FT /db_xref="GOA:Q2LCU0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2LCU0" FT /protein_id="ABC68292.1" FT /translation="MDSRTGELITVPQAENGVYIWEISNPLYFKIYLVEEIMYTTTKVY FT HIQIRFNHNLRRALDLHQAFLNFQVWTTSLTASGTTYLHRFRHLVMLYLDRLGIITINN FT VIRAVRFATDRSYVNHVLENHSIKFKIY" FT gene complement(1160..1549) FT /gene="Trap" FT CDS complement(1160..1549) FT /codon_start=1 FT /gene="Trap" FT /product="trans-activating protein" FT /db_xref="GOA:Q2LCT9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2LCT9" FT /protein_id="ABC68291.1" FT /translation="MLNSSSSTPPSIKPQHRAAKRRGTRRRRIDLECGCTIYVHISCSN FT HGFTHRGTHHCASGREWRLYLGDIKSPVFQDLPSRRNNVHNDQSVPHPDTVQPQPQESV FT GSPPGIPELPSLDDISDSFWNDLFA" FT gene complement(1470..2549) FT /gene="Rep" FT CDS complement(1470..2549) FT /codon_start=1 FT /gene="Rep" FT /product="replication-associated protein" FT /db_xref="GOA:Q2LCT8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2LCT8" FT /protein_id="ABC68290.1" FT /translation="MPSAPKRFRISSKNYFLTYPRCSLSKEETLSQLQTINTPTNKKFI FT KICRELHEDGEPHLHVLIQFEGKFVCTNQRLFDLVSQTRSAHFHPNIQGAKSSSDVKSY FT IDKDGDTLEWGKFQVDGRSARGGQHTANDAAAEALNAPDKRTALQIIKEKLPEKYLFQF FT HNLNSNLDRIFSKAPEPWVPPFPLSSFTNVPDEMQEWADEYFGRGSAARPLRPKSLIVE FT GDSRTGKTMWARALGPHNYLSGHLDFNSKVFSNEVEYNVIDDVAPHYLKLKHWKELIGA FT QKDWQSNCKYGKPVQITVGIPAIVLCNPGEGVSYKDFLDKEENAALKSWTLHNAKFIFI FT DSPLYQTTTQGGEEKRNSP" XX SQ Sequence 2674 BP; 681 A; 586 C; 617 G; 790 T; 0 other; accggatggc cgcccgattt ttgccctgcc ctacgtggcg cactggtggc cgctcgattc 60 ctctcactcg ctctcgggga gtttctcctt gatggtcccc tcatgcttga ttttctcctt 120 taattcaaat taaaggattt aactgttgtc cgaccaatca tagtgcgcct gaggagctta 180 gatatctgtg ttaatacgtg gtccctaagt tttattgtct ctataaaact aaagcaagac 240 tgaagtcatt ctttaattcg aaatgcctaa gcggggtccc tcatggcgcc caatggtggg 300 gacctcaaag gtaagccgca cttctaattt ctctcctcgt ggaggtatag gcccaaaatt 360 caacaaggcc tctgaatggg ttaacaggcc catgtatagg aagcccagga tatatcgtac 420 gctcagaacg cccgatgttc ccagaggctg tgaagggccc tgtaaggtcc agtcttacga 480 gcaacgtcac gatatctccc atgttgggaa ggttatgtgt atatccgata ttacgcgcgg 540 caacggtatt actcaccggg tcggtaagcg tttctgtgtt aagtccgtgt atattttagg 600 caaggtatgg atggacgaga atatcaagct caagaaccac acgaacagtt gcatgttctg 660 gttggtcaga gaccgaagac cctatggaac gccaatggat tttggccagg tgttcaacat 720 gtttgacaac gagcccagta ctgcaaccgt gaagaacgat ctccgtgatc gtttccaggt 780 catgcacaag ttctatgcca aggtcactgg tggacagtat gccagcaatg agcaggcgct 840 agtcaagcgg ttctggaagg tcaacaacca tgtggtctac aatcaccagg aggctggcaa 900 gtacgagaac cacacggaga acgcattatt attgtatatg gcatgtactc atgcatctaa 960 ccctgtgtat gcaacgctga agattcgaat ctatttctat gattcaatca caaattaata 1020 aattttgaat tttattgaat gattttccag tacatgattt acatatgatc tgtcagtcgc 1080 aaaacgaaca gctctaatta cattgtttat cgtaataatg cctaatcggt ctaaatacaa 1140 catgactaag tgtctaaacc tatgcaaata agtcgttcca gaagctgtca gagatgtcgt 1200 ccagacttgg aagttcagga atgcctggtg gagatccaac gctctcctga ggttgtggtt 1260 gaaccgtatc tggatgtggt acactttggt cgttgtgtac attatttctt ctactaggta 1320 gatcttgaaa tacaggggat ttgatatctc ccagatataa acgccattct ctgcctgagg 1380 cacagtgatg agttccccgg tgcgtgaatc catggttgct gcagctgatg tggacgtata 1440 tagtgcatcc acactctaga tctatccttc tacggcgagt tcctcttctc ttcgccgccc 1500 tgtgttgtgg tttgatagag gggggagtcg atgaagatga atttagcatt gtgaagtgtc 1560 cacgatttta aagctgcatt ctcttctttg tcgaggaaat ctttataact gactccctca 1620 ccaggattgc agagcacgat tgctgggatg ccaactgtaa tttgaactgg ctttccgtat 1680 ttgcaatttg actgccagtc tttttgagca ccaatcaatt ccttccagtg ctttaacttt 1740 agataatgcg gtgcgacgtc atcaatgacg ttatactcca cttcgttcga gaaaaccttt 1800 gagttgaagt ccagatggcc actcaagtaa ttatgtgggc ctaatgcacg agcccacatc 1860 gtcttccctg tccttgaatc accttcgact atcaaactct taggtctcaa tggccgcgca 1920 gctgaacctc tcccaaaata ttcatcggcc cactcttgca tctcgtcggg aacgttagtg 1980 aaggaggaga ggggaaacgg aggaacccat ggctccggag cctttgagaa aattctatct 2040 aaattagaat ttaaattatg aaattgaaaa agatatttct ccggcaactt ctctttaatt 2100 atttgaagag ccgttcgttt atccggagca tttaacgcct cagctgcagc gtcattagcc 2160 gtatgctgac ctcctctagc acttcgtccg tcgacctgga atttccccca ttcgagagta 2220 tctccgtctt tgtcgatgta ggacttgacg tcggacgatg atttagctcc ctgaatgttc 2280 ggatggaaat gtgctgacct tgtttgggat accaggtcga agagtctttg atttgtgcag 2340 acgaacttcc cttcgaactg gataagcacg tggagatgag gttccccatc ttcgtgaagc 2400 tctctgcaga ttttaatgaa tttcttattt gttggagtat ttatggtttg taattgggaa 2460 agtgtctctt ctttagagag agaacaacga ggatatgtga ggaagtagtt ttttgaagaa 2520 atacgaaatc ttttaggagc tgatggcatt tttgtaatac tggggttgtc accaattgag 2580 ctctctctca aaagtcctta tgaattggtg acattggtgt acaatatata ctagaagttc 2640 ttaagggtcc tatagcggcc atccgtataa tatt 2674 //