ID   DQ333945; SV 1; linear; genomic RNA; STD; VRL; 2156 BP.
XX
AC   DQ333945;
XX
DT   01-JUN-2007 (Rel. 92, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Rice stripe virus isolate Zhejiang segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2156
RX   PUBMED; 17585367.
RA   Zhang H.M., Yang J., Sun H.R., Xin X., Wang H.D., Chen J.P., Adams M.J.;
RT   "Genomic analysis of rice stripe virus Zhejiang isolate shows the presence
RT   of an OTU-like domain in the RNA1 protein and a novel sequence motif
RT   conserved within the intergenic regions of ambisense segments of
RT   tenuiviruses";
RL   Arch. Virol. 152(10):1917-1923(2007).
XX
RN   [2]
RP   1-2156
RA   Zhang H.-M.;
RT   ;
RL   Submitted (17-DEC-2005) to the INSDC.
RL   Zhejiang Provincial Key Laboratory of Plant Virology, Key Laboratory of
RL   Animal and Plant Virology, Ministry of Agriculture, Institute of Virology
RL   and Biotechnology, Zhejiang Academy of Agricultural Sciences, Shiqiao Road
RL   198#, Hangzhou City, Zhejiang Province 310021, China
XX
DR   MD5; db628c7d80b23618c949df215ab704e8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2156
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="Zhejiang"
FT                   /mol_type="genomic RNA"
FT                   /note="RSV"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="p4"
FT                   /note="major nonstructural protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:A5X2H4"
FT                   /protein_id="ABC68338.1"
FT                   /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSNTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1245..2105)
FT                   /codon_start=1
FT                   /product="pc4"
FT                   /note="possible MP belonging to 30K superfamily"
FT                   /db_xref="GOA:A5X2H5"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:A5X2H5"
FT                   /protein_id="ABC68339.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGVERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2156 BP; 694 A; 452 C; 396 G; 614 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacagtaga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcctga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacagaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccctggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgttcttcaa catgttgcaa ccctctttgg gcggttggat caccaagaat       420
     ttccttaggc accctaatag gatgtctaag gaccaaatta aactgctcct ggatcagatc       480
     atcaagatgg ctaaggctga gagctcaaac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatacaa cctcttctac acaaaacata gtttattaca       600
     tacaacattt tttcacccac gagtgcttgc attctagaag tggagccagt ttgggttgat       660
     cttcttgtat ggaaacacaa gtatattata gtctaaacaa tatacataat gtttgtacac       720
     ttaagcttga ttgcttgtaa ataattgtgt atgattgtgc gtatgtatac atatgtcaat       780
     atataactgt acacaggtgt gtagatgtaa acacttgaaa caaattaata aatatatacc       840
     catcaactca tatacatact tgtgagtctt ggctcttcca tctacacata gaaacatgag       900
     agtatcatac aagacccttt gcaaaaatac taataacttt ggttttacaa tgtcaaaact       960
     aaaaactgaa ataccaaaaa catgagaaaa tagaaaatca aaaacaatga atggtgctaa      1020
     gcaccacatc cggatgtggt gcgtagcacc attttcataa cattaatcta taacctacta      1080
     gtggcaaaaa cacccatatg catgaagtgc atagcactct cttatggatt gactactatg      1140
     attacttgaa tgcatagcat tctcctgaag aaaatcagag aagaacagac cacatcaagt      1200
     gcgtagcact aaatgttagc atactccgga actggttatc tcacctacat gatgacagaa      1260
     acttcagatt ttgatttctt tgtgatgggt atcttctttg gctgcttcac cacaccgaac      1320
     tccttctcag tgtctagctc agggaagctc ttgctggtga aagcacctcc aacagctttc      1380
     tgaactacat tagtcgtgaa attactgaag ctggacaaat ggtttatagc cttatcctct      1440
     agtggttcaa attcaaacat cacagtgtca ctggtcttca tggacactgg cagatctgtt      1500
     ctttcaaccc cccagaacca aagagttctg gagatgacac agttctgcac tgagctgtca      1560
     tcaacagata cggacacttg aagattatgc ttatcctcca aagccagaaa attcgctaga      1620
     gaacccaaaa cagcaaaatt cttgctaatt gggtagcgaa cctctacctc aacctggtct      1680
     gaggagttca cataggactt gtctattatg cggagggtag ttattccact agctctaccc      1740
     ttaatcccaa tccagaccat agcaaaagtt gccactctaa agaatggata atgagtgaga      1800
     ggttgatgaa accaatatgg atcaacaagt atgttgaaag ttgctttcct atgggccttc      1860
     acagaatagt cctgtttggc tatgaacata tcatacttgt tcaccttgac atctgagaag      1920
     ctgaagggct ccaatccaag cattgtggca gcttggtcaa tcgtaaccct accctggttc      1980
     agaggcctct tggagagagc tagagatttc ctattcttat tatcaactct cttttgggac      2040
     tcctcactaa ggtcatcata gagtacctta ctttttgaag tggacaaaag tcgagacaaa      2100
     gccataatta aagtatatat tagcttaatc tcaaaagata taccctgact gtgtgt          2156
//