ID DQ333944; SV 1; linear; genomic RNA; STD; VRL; 2476 BP. XX AC DQ333944; XX DT 01-JUN-2007 (Rel. 92, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Rice stripe virus isolate Zhejiang segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2476 RX PUBMED; 17585367. RA Zhang H.M., Yang J., Sun H.R., Xin X., Wang H.D., Chen J.P., Adams M.J.; RT "Genomic analysis of rice stripe virus Zhejiang isolate shows the presence RT of an OTU-like domain in the RNA1 protein and a novel sequence motif RT conserved within the intergenic regions of ambisense segments of RT tenuiviruses"; RL Arch. Virol. 152(10):1917-1923(2007). XX RN [2] RP 1-2476 RA Zhang H.-M.; RT ; RL Submitted (17-DEC-2005) to the INSDC. RL Zhejiang Provincial Key Laboratory of Plant Virology, Key Laboratory of RL Animal and Plant Virology, Ministry of Agriculture, Institute of Virology RL and Biotechnology, Zhejiang Academy of Agricultural Sciences, Shiqiao Road RL 198#, Hangzhou City, Zhejiang Province 310021, China XX DR MD5; aabf95a829334dbb134829195e93745b. DR EuropePMC; PMC5849359; 29474489. XX FH Key Location/Qualifiers FH FT source 1..2476 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="Zhejiang" FT /mol_type="genomic RNA" FT /note="RSV" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="p3" FT /note="psossible inhibitor of gene silencing" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:A5X2H2" FT /protein_id="ABC68336.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWTLSHDKNLPEEYRLPAIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1416..2384) FT /codon_start=1 FT /product="pc3" FT /note="coat protein" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ABC68337.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2476 BP; 758 A; 533 C; 428 G; 757 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggac tctgtcccat gataagaatc tcccagaaga gtacagactt cctgctataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caacaggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc cgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaagaaa 720 aaagaaaata aaacaaataa tcaaaaaaaa cacaaaaaaa tcttaaaaat gaaaaacaca 780 aaaaaccaaa aaactaaaag aactaaaaaa catcatgacc taagaaactg cacaccactg 840 gttgtctagt gggctctagt tggtagagaa agctatgctt ttgcctaaag ccatgattgg 900 ccaatcctta aaatgtgcta agcacattat ccgaagatgt ctcggatgtt tttttaccta 960 acctaatttt tttgtatttt tatataattt tttgattttt ttgtatttta tatacatatt 1020 tttgtttttt gatttttttg ttttttaata ttttttcttc taattactac attaatatat 1080 ttgattattc atatacttaa aatatatagt atgtattata aaaatagagc aatataataa 1140 agctagtata actacattac aaacatatat ctaaatattt agatagactt atcaaactaa 1200 agactctact agagagtgag taataataat ggcaatacct cacacacaaa gcccagaacc 1260 acacagacaa aataacttat ggaatataat caaaaactaa aatatacaca tataaatata 1320 catattaact tacacctaaa gaaacaacac actgtttgaa gacatacatc ttccagggag 1380 atatgagatc ccccacaact actgacttgc tcagtctagt catctgcacc ttctgcctcg 1440 tcctcgaaga actccttcac caacccgctg acttcagatg ctgtctttga agtgttctca 1500 gcaaggatct tcatcagttt gctctgttga gccaagtaca gccttgtctg attcccataa 1560 gtgctgatcg tattgacaga cataccagcc agcgcatcga agattgtggt cttcactttc 1620 ccattggtga tgaattcatc taagaccttc tttctaccat cttccttctt cttgtcagcc 1680 aggttctttg acttgcatgt gatgaccagg agaccagttg tgtacttcat catgtctatg 1740 tcttttgtca gaccacgctc cttcttctta ccctctggca tggtcttttt ggttatttgg 1800 aaggagtgaa tgatgtgcac aacaaacaaa atgtgactta gggagtgagt tgtgcagtaa 1860 ggagctgttt cactctccag tttaatatat tgtggaacat agtcccacag taagttatca 1920 caccctgtta gtcccaggtc agaggagtcc acagccatct taacaccaga aatttgtctc 1980 acaacttcat gtgagacatt tgggaatagc tgagccagcc ttccaagtgt gatagcattg 2040 gcatttgtcc ccaccgagga cactatccca tacctcgaca ccaaggttga agcctctgtg 2100 cttccagccg ccactttcac tttcttagtg acatctctca caaagccagt gcctctcaca 2160 tatctcatgg tgatgcacat agtcatatcc ttggccagtg tgtcaccacc tttgtccttc 2220 aatatgccaa tcagagttgc agcatcatag cctgcatact ctatctgacc agcaaaggtc 2280 acaacatcag ccttatgagc agtcaggtaa gacaacgcat ctttggagat gtcattgatt 2340 gccttctgca aatcagctag agtggctggc ttgttggtgc ccattgtagc aagaggtact 2400 ggaggaatgg ttgcggctta gatgaaattt ggaatgtaaa agcaaaatcg aaaattttat 2460 taccctgact ttgtgt 2476 //