ID DQ333943; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC DQ333943; XX DT 01-JUN-2007 (Rel. 92, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Rice stripe virus isolate Zhejiang segment RNA2, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-3514 RX PUBMED; 17585367. RA Zhang H.M., Yang J., Sun H.R., Xin X., Wang H.D., Chen J.P., Adams M.J.; RT "Genomic analysis of rice stripe virus Zhejiang isolate shows the presence RT of an OTU-like domain in the RNA1 protein and a novel sequence motif RT conserved within the intergenic regions of ambisense segments of RT tenuiviruses"; RL Arch. Virol. 152(10):1917-1923(2007). XX RN [2] RP 1-3514 RA Zhang H.-M.; RT ; RL Submitted (17-DEC-2005) to the INSDC. RL Zhejiang Provincial Key Laboratory of Plant Virology, Key Laboratory of RL Animal and Plant Virology, Ministry of Agriculture, Institute of Virology RL and Biotechnology, Zhejiang Academy of Agricultural Sciences, Shiqiao Road RL 198#, Hangzhou City, Zhejiang Province 310021, China XX DR MD5; 27a59a3cef97072a923fca365bd591c5. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA2" FT /isolate="Zhejiang" FT /mol_type="genomic RNA" FT /note="RSV" FT /db_xref="taxon:3052763" FT CDS 81..680 FT /codon_start=1 FT /product="p2" FT /db_xref="GOA:Q89717" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/Swiss-Prot:Q89717" FT /protein_id="ABC68334.1" FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI FT WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV FT TNGIPISKNFNEIALPDPSPSDDYVLVGAHECPILM" FT CDS complement(980..3484) FT /codon_start=1 FT /product="pc2" FT /db_xref="GOA:A5X2H1" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:A5X2H1" FT /protein_id="ABC68335.1" FT /translation="MHFKSYFIYTTIFNMAWGAPIPFPDTHSWMRNREREPSEIVKVPC FT SARAPPCKLTYELNGYFIENGLICYNRASVNYFETCYTGNYDYKLPLHPSFSKFGGHVY FT LSCDDAILQNVSLVGIQQTEYTSSPLLITNSNSEKISYSNLKTGFLGIVYAVETRACIQ FT PDQAKKPEEIINHGVAIKPSCTDGVLYYINSACEVNVSDQTFSIPSCESVRLPTYDDTI FT EVCDKGGCQNVTCHPGEICDKYERMDMIMRIKNYQCSHIYKYSLYSMILFFVIVIVFTL FT ITIMNILFFLKPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED FT SIAPNTNVSDKVKRKGRKVENGLIFIPYILMILLLVCSAESCQDLVSSISNIERCTNNS FT CDFISKMKLTLLNTPQDFCFKTSTDVYKIRFNSVRVMCLSVPQYYTNSFKRVISREEWK FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHIFSYCPAYHYNWKRIEYEPTSSRACTI FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA FT YLRTSNDLGSFDKELLGNIQCPTKEDAVVLSSKCKTKILSNEDLPVIRYIERDGVDMLE FT HVKSEPLKDVLVSSSGISLGTLDLFPVELNLQFKEAITSIITSKISLNGTSCRITGIER FT KFKKTTISIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVTVGSMIKCKF FT IYSGDTLMCKYDVSPLEITVISPSLDVSSFEAVKTSTTNWMELLAGIVKDNPKLSLVAS FT IIPIGLILKTIRSFLDDIRQVD" XX SQ Sequence 3514 BP; 1063 A; 740 C; 628 G; 1083 T; 0 other; acacaaagtc ctgggtatat aagccacata tatcatataa atctaacaga aatcgtccac 60 ggagaatctc gtcctcagta atggcattac tccttttcaa tgatcactac tatggttttc 120 tccacaagta taaaagacac actggatcat atgataatct cttcaatttg aggtgctcta 180 aagaagacca ctatttgaac tctcttgatg ccatctggct catgggatgc tgtgaggagt 240 tcacagatcc agctcttaga gcacatgctc tcgccatagc aactgaatct aacataggtt 300 tggttaacaa taatgccgtg atatctgatg agaggctgaa atgctggctc tgtaaaaaac 360 catctcatca acagactgag catctgaaat tgatcctgtt acccaacttg gtcaacgggt 420 ttcagtttgc tacagagtca tatcacatat gcctgaagga tcactctgga gatgacccta 480 cacaatatct tagtgagttc tcctttccca caggattaag agcctactac aagccacatc 540 agaagatgga gcataaacat atagttgtaa ccaatggaat acctatttca aagaatttca 600 acgaaattgc tctccctgac ccatctccta gtgatgacta tgtcttggtt ggagcacatg 660 agtgccctat tctaatgtga acttggaaga tgatattgac tgtggcctac aggcacatac 720 acacactggc cacaaacact acaatggtgc tatgcatcaa cttataatct tatatcctcg 780 aaatggtgct acgcaccaca tccggatggt gagcctagct cactttgatt attgagtaaa 840 ttaatgaaaa caaataagta taattgtaac tataatagct ttcttattat tatgtgatca 900 atacgcttaa aactacacac ttaagcttaa gagaagatta ctaatgaaaa tatgggtata 960 catgagtgaa cctattggct taatcaacct gtctgatgtc atctagaaaa ctcctaatgg 1020 tcttcaaaat gagtcctatt ggtattattg aagctactag agataacttt gggttatcct 1080 tgactatccc ggctagcaat tccatccaat tggtggtgct ggtcttcaca gcttcaaaag 1140 agctcacatc aaggctcggc gatatcacgg tgatttccaa tggtgaaaca tcatacttgc 1200 acataagagt atcaccggag tatatgaatt tgcatttgat catggaacca actgtgaccg 1260 aatagtaagt tgttgttatg catgtgcctt tcttaatgtt gttcagtatc atagggcaaa 1320 ctgccaatcc ctcgcaagcc aagatatcac tgaggtagac tttgtttgaa gattcaatgc 1380 ttatagttgt ctttttaaat ttcctctcta ttccagttat cctgcatgag gtcccattga 1440 gggatatctt acttgttatt atactggtga tcgcttcctt gaattgcaag ttcagctcta 1500 ctggaaatag atccaaagtg cccagagata taccagagct agagactaac acatccttta 1560 agggttcact tttcacatgc tctagcatat ccactccatc cctctctata tacctaataa 1620 ctggcaaatc ttcatttgat agtatcttag ttttacactt actgctaaga acaacagcat 1680 cttctttagt tggacactgt atgttaccta gtaactcttt gtcaaaagac cctaaatcat 1740 ttgaggtcct taaataagct ttcccatcac attctgcata ttctctaggc attctggcac 1800 tattatagtt tgacaatgat atagaaacta aagggctatc atacttacta gtaatgcctc 1860 ctagttcttt caacacatgc ccattttttt gaatataccc aactatttca aacttagtat 1920 ccatgcactt cataatggtg catgccctag aagatgttgg ttcatattct attctcttcc 1980 aattgtagtg gtatgctggg caataggaaa agatgtggaa atcagtgaca caataatcaa 2040 agctcagact agtggattcc ccccatatcg agtgtgttcc atcagttctg caaccttctc 2100 cttcaaagca tttccattcc tctcttgaga tcactctttt gaaactgttg gtataatact 2160 gaggcactga taagcacatg actcgaacac tattaaatcg tatcttgtag acatcagtcg 2220 atgtcttgaa gcagaaatcc tgaggagtgt ttagtagtgt caatttcatt ttagagatga 2280 agtcacaact attatttgtg cacctctcta tattggaaat gcttgaaaca aggtcttgac 2340 aggattctgc agaacagact aatagcaata tcatcaatat atatggtatg aatatcagcc 2400 cattctctac ttttctaccc ttcctcttta ctttatcgga gacattagtg ttaggtgcaa 2460 tggagtcttc tactaccaac aggccctctt ctgcttcatc cactactcta actgttgaca 2520 tatccacaga cacttcatct acaactggtc ttctatgaca tagtccaacc attgaatata 2580 gtaccttctt tagcagccaa aatgcaggtt ttaggaaaaa taagatattc attatggtga 2640 tgagagtgaa tactatcact ataacaaaaa acaaaatcat agagtacaat gaatatttat 2700 agatatgaga gcattgataa ttctttatcc tcattatcat gtccattctc tcatatttgt 2760 cacaaatctc tcctgggtga caagttacat tttgacaacc acccttatca caaacttcaa 2820 tagtgtcatc ataagttgga agtctgaccg attcacaaga agggattgag aatgtttggt 2880 cactcacatt gacctcacat gcagaattga tataatacag cacaccatct gtgcaagaag 2940 gcttgattgc aacaccatga tttatgattt cttctggttt cttagcttgg tcaggctgaa 3000 tgcatgccct agtctcaaca gcatacacta ttcccaagaa accagttttg agatttgagt 3060 atgaaatctt ttcagaattg gaattagtta tcaatagagg gcttgatgtg tattctgttt 3120 gctgtatgcc aaccagagat acattctgca gaatagcatc atcgcaactg agatagacgt 3180 gaccaccgaa cttagagaaa gaaggatgga gtggcagctt gtaatcgtag tttccagtgt 3240 agcatgtctc aaagtaattc acactagccc tgttgtaaca aatcagacca ttttcaatga 3300 aatatccatt cagctcataa gtcaatttgc agggaggggc tctggcactg caagggacct 3360 tgacaatctc agatggctcc ctctccctgt tcctcatcca agaatgggtg tcagggaaag 3420 gtattggtgc accccacgcc atattaaaga ttgtggtgta gatgaaatat gatttaaaat 3480 gcatcttcga agaagttata cccggacttt gtgt 3514 //