ID DQ328877; SV 1; linear; genomic RNA; STD; VRL; 3366 BP. XX AC DQ328877; XX DT 07-MAR-2006 (Rel. 87, Created) DT 15-AUG-2008 (Rel. 96, Last updated, Version 4) XX DE Ippy virus strain Dak An B 188 d segment S, complete sequence. XX KW . XX OS Mammarenavirus ippyense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3366 RX DOI; 10.1016/j.virol.2006.01.026. RX PUBMED; 16494913. RA Emonet S., Lemasson J.J., Gonzalez J.P., de Lamballerie X., Charrel R.N.; RT "Phylogeny and evolution of old world arenaviruses"; RL Virology 350(2):251-257(2006). XX RN [2] RP 1-3366 RX DOI; 10.1016/j.mib.2008.06.001. RX PUBMED; 18602020. RA Charrel R.N., de Lamballerie X., Emonet S.; RT "Phylogeny of the genus Arenavirus"; RL Curr Opin Microbiol 11(4):362-368(2008). XX RN [3] RP 1-3366 RA Emonet S., Lemasson J.-J., Gonzalez J.-P., de Lamballerie X., Charrel R.; RT ; RL Submitted (02-DEC-2005) to the INSDC. RL Unite des Virus Emergents, Faculte de Medecine de Marseille, Universite de RL la Mediterranee, 27 boulevard Jean Moulin, Marseille 13005, France XX DR MD5; 6da85e3a00b1059c888ef85b3a8fb1e8. DR EuropePMC; PMC2680969; 19478873. DR EuropePMC; PMC3053032; 21056893. DR EuropePMC; PMC4217180; 25352624. DR EuropePMC; PMC4900801; 27278118. XX FH Key Location/Qualifiers FH FT source 1..3366 FT /organism="Mammarenavirus ippyense" FT /segment="S" FT /strain="Dak An B 188 d" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052308" FT gene 50..1537 FT /gene="GPC" FT CDS 50..1537 FT /codon_start=1 FT /gene="GPC" FT /product="glycoprotein precursor" FT /db_xref="GOA:Q27YE4" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/Swiss-Prot:Q27YE4" FT /func_characterised="identical sequence" FT /protein_id="ABC71140.1" FT /translation="MGQIITFFQEVPHIIEEVMNIVLITLSLLAILKGVYNVMTCGLIG FT LISFLLLCGKSCSLIYKDTYNFSSIELDLSHLNMTLPMSCSRNNSHHYVFFNGSGLEMT FT FTNDSLLNHKFCNLSDAHKKNLYDHALMGIVTTFHLSIPNFNQYEAMACDFNGGNISIQ FT YNLSHNDRTDAMNHCGTVANGVLDAFYRFHWGRNITYIAQLPNGDGTGRWTFCYATSYK FT YLVIQNISWADHCQMSRPTPIGFASILSQRIRSIYISRRLMSTFTWSLSDSSGTENPGG FT YCLTRWMLFAADLKCFGNTAIAKCNLNHDEEFCDMLRLIDFNKQALKTFKSEVNHGLQL FT ITKAINALINDQLIMKNHLRDLMGIPYCNYSKFWYLNDTRTGRVSLPKCWMISNGTYLN FT ETHFSDEIEQEADNMITEMLRKEYQERQGKTPLGLVDLFIFSTSFYSITVFLHLIKIPT FT HRHIVGQGCPKPHRLNSRAICSCGAYKQPGLPTKWKR" FT gene complement(1596..3308) FT /gene="NP" FT CDS complement(1596..3308) FT /codon_start=1 FT /gene="NP" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q27YE3" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/Swiss-Prot:Q27YE3" FT /func_characterised="identical sequence" FT /protein_id="ABC71141.1" FT /translation="MANSKEVKSFLWTQALRRELGQYCSTVKSSIIKDAQSLLHSLDFS FT EVSNIQRLMRKDKRNDSDLKRLRDLNQAVFNLVELKSTQQKNVLRVGKLTSDDLLVLAA FT DLDRLKNKVMRTERPQTLGVYMGNLTNQQLDQRKRLLDMIGISNARNAPRPGADGVVRV FT WDVKDSSLLNNQFGTMPSLTLACMSKQGQYELNDVVQSLTDLGLVYAAKYPNAMDLEKL FT TQAHPVLSIIDVSKSSINVSGYNFSLSAAVKAGACMLDGGNMLETLKVTPQNLEDILAS FT MLKVKRAHSMFVSDTPGDRNPYENLLYKVCLSGNGWPYIACRTSLTGRAWDNTVVDLGP FT PIDLSQNKQMSPAKPKGAGHGMPSGLTMSQILALKDLMAAVDPNAKTWIDIEGRAEDPV FT EIAFYQPQTGAYIHFYREPTDAKQFKQDSKYSHGIDIGDLFNVQPGLTSAVLELLPPNM FT VLTCQGSEDIRRLLDSQGRKDIKLIDVLMSKSEARKFEDEVWDKFGFLCKIHTGHVVEK FT KKRGNKEEITPHCALLDCLMYEAASTGRFSPGSIRAVLPRDMVFRAVTEKVAL" XX SQ Sequence 3366 BP; 889 A; 797 C; 714 G; 966 T; 0 other; cgcacagtgg atcctaggca ttttggttgc gcttatttct tgtccaatta tgggacagat 60 aataaccttc tttcaggaag tgcctcacat tatagaggaa gtcatgaaca ttgttctgat 120 caccctatcc ctcttggcta tcttgaaggg tgtgtacaat gtcatgactt gtggtctgat 180 tggattgatt tcctttctct tactgtgtgg gaagtcctgc tctctaatct acaaggacac 240 atataacttc tcatccattg aacttgacct ctcacacctc aacatgacat tgcccatgtc 300 ctgcagccga aacaactcac accactatgt cttcttcaac ggatctggct tagagatgac 360 attcactaac gattcacttc ttaaccacaa attctgcaat ctttcagacg cccataaaaa 420 gaatctttac gatcatgcgc taatgggcat tgtcacaact ttccacttgt caatcccgaa 480 cttcaatcaa tacgaagcaa tggcctgtga cttcaatgga gggaatatta gcattcaata 540 caacttgagc cacaatgatc gaacagatgc aatgaaccac tgtggcactg tagctaatgg 600 tgtactggat gctttttata ggttccattg gggcagaaat ataacctaca tcgctcagtt 660 gccaaatggc gacggcactg gcagatggac attctgttat gccacaagtt ataagtacct 720 ggttatccaa aacattagct gggctgatca ttgtcaaatg tcaagaccaa ctcccattgg 780 ctttgctagc attctgagcc aacggattag gagcatttac atttcaagac gactgatgag 840 cacattcact tggtctctat ccgacagttc aggtactgag aatccaggtg gctattgtct 900 caccagatgg atgctttttg cggctgactt gaaatgcttt ggaaacacag ccattgccaa 960 atgtaacctg aatcatgatg aagagttctg cgacatgttg aggcttattg acttcaacaa 1020 gcaagccttg aaaacattca aatcggaggt taaccatggt ctacaactaa ttacaaaggc 1080 gattaatgcc ttgatcaatg accaactcat tatgaagaat cacttaaggg acctaatggg 1140 tatcccttat tgcaattatt caaaattctg gtatctaaat gacacaagaa caggtagagt 1200 ctctctgcct aagtgctgga tgatcagcaa cgggacctat ctaaatgaga ctcatttttc 1260 tgatgagatt gaacaggaag cagacaatat gatcacagaa atgttgagaa aagagtatca 1320 agaaagacaa gggaagaccc cattgggtct agttgatctt tttattttta gcacaagctt 1380 ttattcaatc acagtgttcc tccatctcat aaagattcca acgcacagac acatcgtggg 1440 acaagggtgt cccaagccac acagactaaa cagtagagca atctgctcct gtggtgccta 1500 taaacagccg ggactaccca ccaagtggaa gcgctgatct ccacaggggc ccccgtgacc 1560 caccgccgaa aggcggtggg tcacgggggt gccacttaca gggcaacctt ctctgtcact 1620 gctctaaaga ccatgtctct gggcaacaca gccctgatgg aacccgggct gaatctgcct 1680 gtggatgctg cttcatacat caggcaatcc aacaatgcac aatggggcgt tatctcctcc 1740 ttgttgcctc tcttcttctt ttcaacaacg tgaccagtat gaattttgca taaaaatccg 1800 aatttatccc acacttcatc ttcaaatttt ctggcctcag atttggacat cagtacatca 1860 atgagcttga tgtcctttct cccctgagaa tccaggagcc tccttatgtc ttcagaccct 1920 tggcaggtta agaccatatt tggaggtaaa agctccaaaa ccgctgatgt taacccaggc 1980 tgcacgttga agagatctcc aatgtcaata ccatgggagt atttggagtc ctgtttgaac 2040 tgtttggcgt ctgtgggttc tctgtagaag tgtatgtaag ctcctgtttg tggctggtaa 2100 aaggctatct ccacggggtc ctcagctctc ccttctatgt caatccacgt cttggcattt 2160 ggatccacgg cggccatcag atctttaaga gctagtatct gagacattgt gagaccagaa 2220 ggcatcccgt gtccggcccc tttgggttta gctggactca tctgtttgtt ttgggacaga 2280 tcaatgggtg gtccgagatc aactacagta ttgtcccaag cccttcctgt cagacttgtt 2340 ctgcatgcta tataaggcca accgttgcca gagagacata ctttgtacag cagattttca 2400 tatgggtttc tgtcgcctgg tgtatctgac acaaacatac tgtgggctct ttttactttc 2460 aacatagaag ctaatatgtc ctccaagttt tggggagtca ccttcaatgt ctcaagcatg 2520 ttaccaccat ctagcataca tgcgcctgcc ttcactgctg cactcaagct gaagttgtac 2580 ccagagacat tgatagatga tttggaaaca tcaataatgc ttaagactgg gtgtgcttga 2640 gttagtttct caagatccat ggcattagga tacttggctg cgtaaactag accaagatca 2700 gtgagagatt gcacaacatc atttaactca tactgtccct gtttactcat acaggctaga 2760 gtgagactag gcatagtccc aaactggttg tttaagagtg aggagtcttt cacatcccac 2820 acccgcacca ctccgtctgc accaggcctg ggtgcattcc tcgcattgct aatgcctatc 2880 atgtccagaa gccgttttct ctgatcaagt tgttgatttg ttagattgcc catatagaca 2940 ccaagagttt gtggtctctc agttctcatc actttgttct tcagtctgtc caagtcagct 3000 gcgagaacca agaggtcgtc agacgttagc ttcccaactc tcaaaacatt cttctgctgt 3060 gtagatttca gttcaacaag gttgaacact gcttggttta ggtcccttag cctcttgagg 3120 tctgagtcat tccttttgtc tttcctcatg agcctttgaa tattggagac ttctgagaag 3180 tccagactgt gcaggagaga ctgggcatcc ttgataatgg aggattttac agtactacag 3240 tactgcccaa gttctctcct gagtgcctgg gtccaaagga atgacttcac ttctttggaa 3300 ttggccattg ctggagattt ttgacagtga aaaagcgcaa tcaaattgcc taggatccac 3360 tgtgcg 3366 //