ID   DQ318932; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   DQ318932;
XX
DT   02-DEC-2006 (Rel. 90, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 2)
XX
DE   Hibiscus variegation virus coat protein (AV1) gene, complete cds.
XX
KW   .
XX
OS   Hibiscus variegation virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-756
RX   DOI; 10.1007/s11262-007-0149-1.
RX   PUBMED; 17682933.
RA   Hernandez-Zepeda C., Idris A.M., Carnevali G., Brown J.K.,
RA   Moreno-Valenzuela O.A.;
RT   "Preliminary identification and coat protein gene phylogenetic
RT   relationships of begomoviruses associated with native flora and cultivated
RT   plants from the Yucatan Peninsula of Mexico";
RL   Virus Genes 35(3):825-833(2007).
XX
RN   [2]
RP   1-756
RA   Hernandez-Zepeda C., Idris A.M., Brown J.K., Moreno-Valenzuela O.A.;
RT   ;
RL   Submitted (30-NOV-2005) to the INSDC.
RL   UBBMP, Centro de Investigacion Cientifica de Yucatan, Calle 43 No. 130,
RL   Merida, Yucatan 97200, Mexico
XX
DR   MD5; a3c24cac9a4ee9e717fade79b5ce6190.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..756
FT                   /organism="Hibiscus variegation virus"
FT                   /segment="DNA-A"
FT                   /host="Hibiscus sabdariffa L."
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Yucatan"
FT                   /clone="pHiVV86"
FT                   /db_xref="taxon:361736"
FT   gene            1..756
FT                   /gene="AV1"
FT   CDS             1..756
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A0SEC9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:A0SEC9"
FT                   /protein_id="ABC61478.1"
FT                   /translation="MFHGARWREPQRLAGPLIFLLVQEVAQELTRPRNGLTGPYTESQG
FT                   CRSRLYRMMRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHKFYAKVTGGQYASNEQAIVKRFWRVNTHVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATPKIRIYFYDSIMN"
XX
SQ   Sequence 756 BP; 204 A; 163 C; 198 G; 191 T; 0 other;
     atgttccatg gcgctcgatg gcgggaacct caaaggttag ccggtccact aatttttctc        60
     ctcgtgcagg aagtggccca agagttaaca aggcctcgga atgggttaac gggcccatat       120
     acagaaagcc aaggctgccg ctctaggcta tatcggatga tgaggactcc cgatgtgccc       180
     agaggctgtg aagggccttg taaggtccag tcatatgaac agcgccacga tatctcacat       240
     gtcgggaagg tcatgtgcat ctccgatgtg acacgtggta acggtattac ccaccgtgtg       300
     ggtaagcgtt tctgtgttaa gtctgtgtat attctaggta aggtctggat ggatgagaac       360
     atcaagttga agaatcacac gaacagtgtg atgttctggc ttgtcaggga ccgtagaccc       420
     tacggtactc caatggattt cggacaggtg ttcaacatgt tcgataacga gcctagcact       480
     gctactgtta agaacgatct ccgtgatcgt tatcaggtga tgcacaagtt ttatgccaag       540
     gtgacaggtg gacagtacgc cagcaatgaa caggcaatag tcaagaggtt ctggagggtc       600
     aatactcatg tggtctataa tcatcaggag gcagccaaat atgagaatca tacggagaat       660
     gcactattat tgtatatggc atgtacacat gcctctaatc ccgtgtatgc aacgcctaag       720
     attcgaatct acttctacga ttcgatcatg aattaa                                 756
//