ID   DQ299382; SV 1; linear; genomic RNA; STD; VRL; 1020 BP.
XX
AC   DQ299382;
XX
DT   02-DEC-2006 (Rel. 90, Created)
DT   11-MAR-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Leek yellow stripe virus isolate LYSV-16 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1020
RX   PUBMED; 17131941.
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   "Molecular characterization of Czech and Chinese leek yellow stripe virus
RT   isolates from garlic";
RL   Acta Virol. 50(3):207-210(2006).
XX
RN   [2]
RP   1-1020
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   "Partial molecular characterization of Czech and China LYSV isolates";
RL   Unpublished.
XX
RN   [3]
RP   1-1020
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   ;
RL   Submitted (21-NOV-2005) to the INSDC.
RL   Dept. of Cell Biology and Genetics, Faculty of Science, Palacky University,
RL   Slechtitelu 11, Olomouc CZ-783 71, Czech Republic
XX
DR   MD5; 59864edfadeb1f670ac311bc465a17dc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1020
FT                   /organism="Leek yellow stripe virus"
FT                   /host="garlic"
FT                   /isolate="LYSV-16"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..>1020
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0S730"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A0S730"
FT                   /protein_id="ABC02094.1"
FT                   /translation="VLEQAPYSELSTVGKAPFISEAALRNLYTDCKATESELARYLELY
FT                   DSEAPTEDIFEYQAGEELDAGTQSSKGQKNNADKSIEQRNPVISHSSAHGRNDGGSSDL
FT                   SMGKDKDVNVGTTGTFSVPQIKQIPQKGIAIPMDGGKSILNLDHLLQYKPSQLCVTNTR
FT                   ATRTQFMTWKARLQDEYGVTESEMSIILNGLMVWCIENGTSPNINGVWTMMDGDEQVEF
FT                   PLRPVVEHAQPTLRQIMAHFSALAEAYIEMRNAEQAYMPRYGLQRNLTDMGLARYAFDF
FT                   YEVTSRTPVRAREAHAQMKAAALRNSRPKLFGLDGNVTTTDEDTERHTAHDVNARMHH"
FT   mat_peptide     <1..176
FT                   /product="NIb protein"
FT   mat_peptide     177..>1020
FT                   /product="coat protein"
XX
SQ   Sequence 1020 BP; 338 A; 197 C; 254 G; 231 T; 0 other;
     gggttcttga acaagcaccg tacagtgaat taagcacggt tggcaaagct ccattcattt        60
     ctgaggcagc tttacgcaat ttgtacactg attgtaaggc tacagagtca gaattagcaa       120
     gatatcttga actctatgat agtgaggcac cgacggagga catttttgaa tatcaagcag       180
     gcgaggaatt ggatgcagga acgcaatcaa gtaagggtca gaagaataat gcagataaat       240
     ccatagagca acggaaccca gttatttcac attccagtgc acacgggagg aatgatggtg       300
     gtagctctga cctgagcatg ggcaaagata aagatgtgaa cgttggaacc acaggaacct       360
     ttagtgtacc acaaataaag caaataccac agaaaggcat agcaatccca atggatggtg       420
     gaaagtcaat acttaattta gaccacctcc tacaatataa acctagtcaa ttatgcgtaa       480
     caaacactag agctacaagg acacaattta tgacttggaa ggcgaggcta caggatgaat       540
     atggtgtcac tgagagtgag atgagtatta ttctaaatgg cttaatggtg tggtgcatag       600
     aaaacggcac ttcaccgaat ataaatggag tttggacaat gatggatggc gatgagcagg       660
     ttgaatttcc tttacgacct gttgttgaac acgcacaacc aaccttacgg caaataatgg       720
     cgcatttttc agcacttgcg gaagcttata ttgagatgag aaatgcagag caggcttaca       780
     tgccaaggta tggattacaa aggaatctaa cagatatggg tctcgcacgg tatgcatttg       840
     acttttacga agtcacgtca agaacaccag ttagagcgcg cgaggctcat gcacaaatga       900
     aagcagcggc cttgcggaat tcgaggccga aattatttgg attagacggt aacgtcacaa       960
     ccacggatga ggacacggag aggcacacag cacatgacgt gaatgcacgg atgcaccatc      1020
//