ID   DQ299381; SV 1; linear; genomic RNA; STD; VRL; 1023 BP.
XX
AC   DQ299381;
XX
DT   02-DEC-2006 (Rel. 90, Created)
DT   11-MAR-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Leek yellow stripe virus isolate LYSV-22CZ polyprotein gene, partial cds.
XX
KW   .
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1023
RX   PUBMED; 17131941.
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   "Molecular characterization of Czech and Chinese leek yellow stripe virus
RT   isolates from garlic";
RL   Acta Virol. 50(3):207-210(2006).
XX
RN   [2]
RP   1-1023
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   "Partial molecular characterization of Czech and China LYSV isolates";
RL   Unpublished.
XX
RN   [3]
RP   1-1023
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   ;
RL   Submitted (21-NOV-2005) to the INSDC.
RL   Dept. of Cell Biology and Genetics, Faculty of Science, Palacky University,
RL   Slechtitelu 11, Olomouc CZ-783 71, Czech Republic
XX
DR   MD5; 13bebab0e3d73db3d041d25c7f4cf5d4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1023
FT                   /organism="Leek yellow stripe virus"
FT                   /host="garlic"
FT                   /isolate="LYSV-22CZ"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..>1023
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0S729"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A0S729"
FT                   /protein_id="ABC02093.1"
FT                   /translation="VLEQAPYNELSALGKAPFISEAALRNLYTDCEATEAELARYLELY
FT                   DSDAPVEDTFVFQANDELDAGMQTSKKQKDGNDKSIEQRDPASSQVSSQSKKDGEGSSG
FT                   LSRNKDRDVNVGTTGTFSVPRIKQIPQKGISIPMDGGKSILNLDHLLQYKPNQLNISNT
FT                   RATVAQFKTWMERVQDEYGVTESEMSIILNGLMVWCIENGTSPNINGTWTMMDGDEQVA
FT                   YPLRPIVEHAKPTLRQIMAHFSALAEAYIEMRNSEQAYMPRYGLQRNLTDMGLARYAFD
FT                   FYEVTSRTPVRAREAHAQMKAAALRNSRPRLFGLDGNVTTTDEDTERHTAHDVNARMHH
FT                   "
FT   mat_peptide     <1..176
FT                   /product="NIb protein"
FT   mat_peptide     177..>1023
FT                   /product="coat protein"
XX
SQ   Sequence 1023 BP; 350 A; 207 C; 250 G; 216 T; 0 other;
     gggttcttga acaagcaccg tataacgagt tgagtgcatt aggtaaagca ccgttcatct        60
     ctgaagcagc cctacggaat ttatacactg attgtgaggc aacggaagcg gagttagcac       120
     gatatctcga actttacgac agcgatgcac ctgtagaaga cacatttgtc ttccaagcta       180
     atgatgaatt ggatgcaggt atgcaaacaa gtaagaaaca gaaggacggc aatgataagt       240
     ctattgaaca acgcgatcca gcatcatcac aagttagttc acaaagcaag aaagacggtg       300
     aaggcagttc aggattgagt aggaacaaag acagggatgt aaacgttggc acaacaggaa       360
     cttttagtgt tccacgaatc aaacagatac cacagaaagg tatttcgata ccaatggacg       420
     gaggaaagtc aatactcaat ttagatcatt tactacagta taaaccaaat caattgaaca       480
     tatcgaacac aagagccaca gtggcacagt ttaaaacctg gatggagaga gtgcaggatg       540
     aatatggtgt cactgagagt gagatgagca tcatcctgaa tggtttgatg gtgtggtgta       600
     tcgaaaatgg gacctcacca aacataaatg ggacttggac tatgatggat ggcgatgagc       660
     aagtcgcgta ccctttacga ccaatcgttg aacatgcgaa accaacctta cggcaaataa       720
     tggcacattt ttcagcactc gcggaggcat acattgaaat gagaaattca gagcaggctt       780
     atatgccaag atatggacta caaagaaatc ttacagacat gggtctcgca cggtatgcat       840
     tcgactttta tgaagtcaca tcaagaacac cagttagagc gcgcgaggct cacgcacaaa       900
     tgaaagcagc ggcattacga aactcaaggc caaggctgtt tggactagac ggtaacgtca       960
     caaccacgga tgaggacacg gagaggcaca cagcacatga cgtgaatgca cggatgcacc      1020
     atc                                                                    1023
//