ID   DQ299380; SV 1; linear; genomic RNA; STD; VRL; 1023 BP.
XX
AC   DQ299380;
XX
DT   02-DEC-2006 (Rel. 90, Created)
DT   11-MAR-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Leek yellow stripe virus isolate LYSV-5CZ polyprotein gene, partial cds.
XX
KW   .
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1023
RX   PUBMED; 17131941.
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   "Molecular characterization of Czech and Chinese leek yellow stripe virus
RT   isolates from garlic";
RL   Acta Virol. 50(3):207-210(2006).
XX
RN   [2]
RP   1-1023
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   "Partial molecular characterization of Czech and China LYSV isolates";
RL   Unpublished.
XX
RN   [3]
RP   1-1023
RA   Navratil M., Safarova D., Tkadlecova E., Klukackova J.;
RT   ;
RL   Submitted (21-NOV-2005) to the INSDC.
RL   Dept. of Cell Biology and Genetics, Faculty of Science, Palacky University,
RL   Slechtitelu 11, Olomouc CZ-783 71, Czech Republic
XX
DR   MD5; 3449c441668bfc6e6612a5e80e5794fe.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1023
FT                   /organism="Leek yellow stripe virus"
FT                   /host="garlic"
FT                   /isolate="LYSV-5CZ"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..>1023
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0S728"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A0S728"
FT                   /protein_id="ABC02092.1"
FT                   /translation="VLEQAPYNELSALGKAPFISEAALRNLYTDCEATEAELARYLELY
FT                   NSDAPVEETFVFQANDELDAGMQASRKQKDSTDKSIEQRDPASLQASSQGKKDGEGGSG
FT                   LSRNKDRDVNVGTTGTFSIPRIKQISQKGISIPMDGGKSILNLDHLLQYKPNQLNISNT
FT                   RATVAQFKTWMERVQEDYGVTKGEMGIILNGLMVWCIENGTSPNINGTWTMMDGDEQVA
FT                   YPLRPIVEHAKPTLRQIMAHFSALAEAYIEMRNSEQAYMPRYGLQRNLTDMSLARYAFD
FT                   FYEVTSRTPVRAREAHAQMKAAALRNSRPKLFGLDGNVTTTDEDTERHTAHDVNARMHH
FT                   "
FT   mat_peptide     <1..176
FT                   /product="NIb protein"
FT   mat_peptide     177..>1023
FT                   /product="coat protein"
XX
SQ   Sequence 1023 BP; 352 A; 197 C; 252 G; 222 T; 0 other;
     gggttcttga acaagcaccg tataacgagt tgagtgcatt aggtaaagcg ccatttatct        60
     ctgaagcagc cctgcgaaat ttgtacaccg attgtgaagc aacggaagcg gaattagcac       120
     gatatctcga actttacaac agcgatgcac ctgtagaaga aacatttgtg ttccaagcta       180
     atgatgaatt agacgcaggt atgcaagcaa gtaggaaaca gaaggacagc acagataagt       240
     ctattgaaca acgagatcca gcatcattac aagctagttc acaaggtaag aaagacggtg       300
     aaggcggttc aggattgagc agaaacaaag acagggatgt aaacgttggc acaacaggga       360
     cttttagtat tccgcgaatc aaacaaatat cacaaaaggg tatttcgata ccaatggatg       420
     gaggaaagtc aatacttaac ttagatcact tattacagta taaaccgaat caattgaata       480
     tatcaaacac gagagccaca gtagcacaat ttaaaacctg gatggagaga gtgcaggaag       540
     attatggtgt cactaaaggt gagatgggca tcattctaaa cggtttgatg gtgtggtgca       600
     ttgaaaatgg gacctcacca aatataaatg ggacttggac aatgatggat ggggatgagc       660
     aagttgcgta cccgctacgg ccaattgttg aacatgcgaa accaacctta cggcaaataa       720
     tggcgcattt ttcagcactt gcagaggcat acattgaaat gagaaattca gagcaggctt       780
     atatgccaag gtatggatta caaagaaatc tcacagacat gagtctcgca cggtatgcat       840
     ttgactttta tgaggtcaca tcaagaacac cagttagagc gcgcgaggct cacgcacaaa       900
     tgaaagcagc ggccttacgt aattcaaggc caaagctgtt tggactggac ggtaatgtca       960
     caaccacgga tgaggacacg gagaggcaca cagcacatga cgtgaatgca cggatgcacc      1020
     atc                                                                    1023
//