ID DQ227315; SV 1; linear; genomic RNA; STD; VRL; 4433 BP. XX AC DQ227315; XX DT 02-MAR-2006 (Rel. 87, Created) DT 31-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Cucumber leaf spot virus, complete genome. XX KW . XX OS Cucumber leaf spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Aureusvirus. XX RN [1] RP 1-4433 RX DOI; 10.1111/j.1744-7348.2006.00096.x. RX AGRICOLA; IND43858159. RA Rosner A., Lachman O., Pearlsman M., Feigelson L., Maslenin L., RA Antignus Y.; RT "Characterisation of cucumber leaf spot virus isolated from recycled RT irrigation water of soil-less cucumber cultures"; RL Ann. Appl. Biol. 149(3):313-316(2006). XX RN [2] RP 1-4433 RA Rosner A., Lachman O., Pearlsman M., Maslenin L., Antignus Y.; RT ; RL Submitted (29-SEP-2005) to the INSDC. RL Virology, ARO, The Volcani Center, Bet Dagan 50250, Israel XX DR MD5; 31463bc66ff147308e532c21183f1000. DR RFAM; RF00171; Tombus_5. XX FH Key Location/Qualifiers FH FT source 1..4433 FT /organism="Cucumber leaf spot virus" FT /mol_type="genomic RNA" FT /country="Israel" FT /db_xref="taxon:165432" FT 5'UTR 1..141 FT gene 142..2349 FT /gene="P84" FT misc_feature 142..2349 FT /gene="P84" FT /note="nonfunctional P84 protein due to mutation; FT replication" FT gene 142..801 FT /gene="P25" FT CDS 142..801 FT /codon_start=1 FT /gene="P25" FT /product="P25 protein" FT /note="replicase" FT /db_xref="GOA:Q283N2" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:Q283N2" FT /protein_id="ABD51792.1" FT /translation="MVLSCLVTLILFPFTTMSALYSLVCRIVNMMLGEIAYLYGDVKAG FT LSFLLRKLTTSWIIVVGMILVLSFTVVGVMPSITLYSIILLCIGSKYGGRLPRYIVAHY FT ERIKEAWEKGVDDDDCTATPPVDCMERVPHKLRPRLACKIAVRAVAKVGLLKRSEANAL FT VYQRVCLDIMESMKMRWHDRLMVLPQAVLALLERPEEVEEVMKAIEASCKGRFDEF" FT gene 2375..3535 FT /gene="CP" FT CDS 2375..3535 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /note="capsid protein; transmission and systemic movement" FT /db_xref="GOA:Q283N1" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q283N1" FT /protein_id="ABD51793.1" FT /translation="MEIARTNKNSIVKYVPAAVGAAYQMGKSIVPYAPTIVDALGNVVS FT RATGRKKKNKGKGVQNQIVGGIGAIAAPVSITKRVRGMRPSFKQTKGKVHIVHRELVTS FT VINLVGNFRVNNNVSAQIGQFRINPSNSSLFTWLPTIASNFDSYRFTSIRFVYVPLCAT FT TETGRVSLFWDKDSQDPLPVDRAALSSYGHSNEGPPWAETILNVPIDGKQRFVTDSNTT FT DRKLVDLGQFAFATYAGGSNNQIGDIYVEYGVEFSEAQPAGGLTQYITKSVGATAFTTG FT PSYVVDANINVNATTANVEFFSPGTFLITAVVFGSTIASPSMAGGNGTLIGDRPVVGGS FT NASIWTCVFSTTGVSTSVPTFTQAGTGLTRVQYPITRVNSQTAYQV" FT gene 3616..4347 FT /gene="P27" FT CDS 3616..4347 FT /codon_start=1 FT /gene="P27" FT /product="P27 protein" FT /note="cell to cell movement" FT /db_xref="GOA:Q283N0" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProtKB/TrEMBL:Q283N0" FT /protein_id="ABD51794.1" FT /translation="MEIQHIDGTFEDSLIVQNEVKKFLISHKTTKAILPLAPYSQLTKW FT KIPKAGFYAPIDVKFVLTPHVSERAQVRGVVKLVDSRDLSPSRELYRSKEFNIGHGLLI FT EGSQLPFCLPVGDYPLQFEVTVLQSQFKETANLYSTSVEWRMMSSTTPLSRVKSVMGAA FT HQPAMKLEPNFKMKLESSKGVSHNQKQRKITKPNGLDRRGRGNSTVGGSSDASQSQGAQ FT AWGGYHNDLGDSLSEYSVSDL" FT gene 3747..4205 FT /gene="P17" FT CDS 3747..4205 FT /codon_start=1 FT /gene="P17" FT /product="P17 protein" FT /note="symptom modulation" FT /db_xref="UniProtKB/TrEMBL:Q283M9" FT /protein_id="ABD51795.1" FT /translation="MENTQGGVLCPNRCKVCSHTTCIRESSGQGGRQASRFTRLVTEPR FT IVSEQGIQYRTWIADRGFPIALLSSSGGLSTSIRGHGVAVTVQGDSKSLLNFCRVAYDV FT FNHPVIQSEVCYGRGPSTSDEVRAEFQDEAGIIQGRLPQSETEENNKT" FT 3'UTR 4348..4433 XX SQ Sequence 4433 BP; 1179 A; 927 C; 1144 G; 1183 T; 0 other; gaatacccta ctagaccgtc tacccagcgt gtctgagagt tgcgtagcca tacgtatagg 60 tattctctcc taattcaggg gtttgaagac tgggtctagc ttaacagcgg ataaattgta 120 acttccagta aaatggcaaa catggtccta agttgcttgg ttactctgat actttttccg 180 ttcacaacta tgtcagcatt gtattctctt gtttgcagga ttgtgaacat gatgttgggt 240 gagattgcgt acctttatgg ggatgttaag gctgggttga gcttcctctt gaggaagctc 300 accacctctt ggataatcgt tgtgggcatg atactggtat tgtcattcac tgtcgtgggg 360 gttatgccat ccatcacctt gtacagcatt attttgctgt gcatagggag taaatatggt 420 ggaaggctgc cacgatacat agttgcccat tatgagcgga ttaaggaagc gtgggagaaa 480 ggggttgatg atgatgactg tacagccaca ccacctgtgg actgcatgga aagggtacca 540 cacaaattac gcccacggct cgcatgcaag attgctgttc gtgctgtggc gaaagtggga 600 ctattgaaac ggtctgaagc taacgccctt gtttatcaac gggtctgtct agacattatg 660 gagagcatga agatgaggtg gcacgaccgt ctgatggtcc tacctcaagc cgtgctagcc 720 ttgctagaaa ggccggagga agtcgaggaa gttatgaaag ccattgaggc gtcctgtaaa 780 ggacgcttcg atgagtttta ggggtgccta ctagaacatc gtggttacaa cacggccgtc 840 cacagtgtca tacctgatgg agtgttgttg aatcacgaag ggatggtggt tcgaagagga 900 ctgcccctat catgtgagcg gaaatggtac tctttctcta gttatgctag cacttatgag 960 tacattgtgc acaattcttc actcgttaat gtttgtagag gtctggttga acgagtgttt 1020 tgcgtcgtgc gagacggtaa attgcagcgt cctctaagac ctagaaagaa tatctttgag 1080 aggaagcttg gtgatgttgg tcgtaaaatc agctctattg ttgggttctg ccccgctatg 1140 acacgcagtg aattctgtga atcttatagc ggctcgcgaa gagccacgta tgagaaagcg 1200 cgattgtcct tggatgttct cccttgcact agatctgatg cctatcttaa gacatttgtg 1260 aaagcggaga agatcaacat taccttgaaa ccagacccag cacccagggt catacagcca 1320 cgtgacccta ggtacaatgt ggaagtggga cgttacttga agccgctgga gccccggttg 1380 atgaaagcaa ttgataaatt gtggggggaa aagacggcaa ttaaggggta tactgttgag 1440 aaggtaggag agatcctgta cgagaagagt ttgaggttca aagaacctgt ctttgtggga 1500 cttgatgcta gccggtttga ccagcattgc tcacggcagg ctttggagtg ggaacactcc 1560 gtgtataact ctattattcg tgatccctac cttaaggagt tgctgacatg gcaaattgat 1620 aatgtgggaa ctgcgtattt aaaggatggc tttgtacgat atcgtgtcga tggttgcagg 1680 atgtctggtg atatgaacac cagcatgggg aactatctaa ttatgtcatg ccttgtatat 1740 caattttgta aggatgttgg gctagatgcc agcctcgcaa attgcgggga tgactgtgtc 1800 ttatatctgg agaaaaagca gttaccattg ctcaagcacc tcccaaattg gttcgaatcc 1860 atgggctatt ctatgaaagt ggaaaaaccc gtgtacaatg tggaggaaat tgagttttgt 1920 caacaacacc ccgttcagct cagcagaggg tgggtaatgg ttaggaggcc tgatgtctgt 1980 ttaacaaaag atgtgtgtat tgtccgagga gggatgacaa ctgatcgtct tcagaggtgg 2040 ttgtatgctc aacgtgatgg gggtctcagc ttagcagggg actgtcccgt tctagggcag 2100 ttttacaact cttttccccg aggcgagtcc tcaggggagt tgtcagaata cgccgaagca 2160 cacaaattta aggccggtaa gcaatatggc gaaattactc cattgtcgag gtattctttt 2220 tggttggcat ttgggttaac acctgatgat cagctagcca ttgaggagga tctcaaacat 2280 tggacacctg aggtgaagtt gggaagcgag gcccctcgca caactttgct ggactattgc 2340 tcaagataac tgaccattat caagtgagag aagtatggaa atagcgcgaa ctaataagaa 2400 cagtattgtg aaatatgtgc ctgcagcagt aggagctgcc tatcaaatgg gcaagtccat 2460 agtaccctat gcaccaacga ttgttgatgc attaggcaac gtggtatctc gagcgacagg 2520 gcgtaaaaag aaaaataagg gaaagggagt acagaatcaa attgtaggtg gtataggggc 2580 aattgcagcc cctgttagca ttactaaacg tgtgcgagga atgaggcctt catttaaaca 2640 aaccaaaggg aaagtccaca ttgtgcatcg tgagctcgtt accagtgtca ttaacctggt 2700 tggtaacttt cgggttaaca ataacgtgag tgcacagata gggcaattcc gtattaatcc 2760 ctctaattcc tccttgttca cttggttacc aaccatagca tcaaatttcg actcatatag 2820 gttcacatca atcaggtttg tttatgtgcc actatgtgct actactgaaa ctggtagggt 2880 gtcattgttc tgggataaag attcacagga cccacttcca gttgacagag ccgctctaag 2940 ttcctacgga cattcaaacg aaggtcctcc atgggcagaa actatactca atgtgccaat 3000 cgatggtaag caacgttttg tcaccgactc aaatacgact gatcgtaagt tggttgacct 3060 gggccagttt gcttttgcca cttatgcagg aggtagtaat aaccaaattg gagacatata 3120 tgttgaatat ggggtagagt tctctgaggc gcaaccagcc ggtggtttaa cgcaatatat 3180 tacaaaatct gttggagcta ctgctttcac cactggacct agttatgtcg tagatgctaa 3240 catcaatgtt aacgccacaa cagcgaatgt cgaattcttt tctcctggga ctttccttat 3300 aaccgccgtc gtcttcggat ccacaatagc ttcgccttcc atggcaggag ggaatggcac 3360 cttaatcggt gaccgcccag ttgtaggagg atcgaatgct tctatttgga cctgcgtgtt 3420 tagcaccacg ggcgtctcca ctagtgtccc aacgtttaca caggcgggca caggcttaac 3480 tcgggtgcag tacccgatca cccgtgtaaa ttcacaaact gcgtatcaag tttaagggcg 3540 aaagtaggtt ggtgtcgcag acttggcaat gcccgagttt agaccttgtg tggctcaaga 3600 agtcttacca gcttcatgga aattcaacat attgacggaa cttttgagga ctcattgatt 3660 gttcaaaacg aggttaaaaa gtttctaata tctcataaga caaccaaagc catactacca 3720 ttagctccct actctcaact cactaaatgg aaaataccca aggcggggtt ctatgcccca 3780 atagatgtaa agtttgttct cacaccacat gtatcagaga gagctcaggt caggggggtc 3840 gtcaagctag tcgattcacg agacttgtca ccgagccgag aattgtatcg gagcaaggaa 3900 ttcaatatcg gacatggatt gctgatagag ggttcccaat tgcccttctg tcttccagtg 3960 ggggattatc cacttcaatt cgaggtcacg gtgttgcagt cacagttcaa ggagacagca 4020 aatctctact caacttctgt cgagtggcgt atgatgtctt caaccacccc gttatccaga 4080 gtgaagtctg ttatgggcgc ggcccatcaa ccagcgatga agttagagcc gaatttcaag 4140 atgaagctgg aatcatccaa gggcgtctcc cacaatcaga aacagaggaa aataacaaaa 4200 cctaatggcc tagatcggag gggtcgtggt aacagcaccg ttggtggttc ttcggatgct 4260 tctcagtccc aaggcgcaca agcatggggg ggttaccata acgatctagg agacagttta 4320 tccgagtact ctgtgtctga cctgtagaga gaccaccaat gcacaccaga aatgggggct 4380 atgagtgtat tggttaattt catttcatcc cttgcgtgga aacacgctag ccc 4433 //