ID DQ207749; SV 1; circular; genomic DNA; STD; VRL; 2593 BP. XX AC DQ207749; XX DT 11-OCT-2005 (Rel. 85, Created) DT 11-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Tomato severe rugose virus strain Petrolina de Goias segment DNA-A, DE complete sequence. XX KW . XX OS Tomato severe rugose virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2593 RA Bezerra-Agasie I.C., Ferreira G.B., Avila A.C., Inoue-Nagata A.K.; RT "First report of Tomato severe rugose virus in chili pepper in Brazil"; RL Unpublished. XX RN [2] RP 1-2593 RA Bezerra-Agasie I.C., Inoue-Nagata A.K.; RT ; RL Submitted (16-SEP-2005) to the INSDC. RL Laboratorio de Biologia Molecular, EMBRAPA Hortalicas, BR 060 - km 09 - CP RL 218, Brasilia, DF 70359-970, Brazil XX DR MD5; cbae24b731b0b312f692c3ef21b0bf39. DR EuropePMC; PMC4113279; 24708727. XX FH Key Location/Qualifiers FH FT source 1..2593 FT /organism="Tomato severe rugose virus" FT /segment="DNA-A" FT /host="chili pepper" FT /strain="Petrolina de Goias" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:158463" FT gene 171..926 FT /gene="AV1" FT CDS 171..926 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP; AR1" FT /db_xref="GOA:Q3HM70" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q3HM70" FT /protein_id="ABA61316.1" FT /translation="MPKRDAPWRLTAGTSKVSRSVNYSPRAGYGPKYNKAAEWVNRPMY FT RKPRIYRTLRGPDVPRGCEGPCKVQSYESRHDVSHVGKVICVSDVTRGNGITHRVGKRF FT CVKSVYILGKVWMDESIKLKNHTNSVMFWLVRDRRPYSTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNNVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(923..1321) FT /gene="AC3" FT CDS complement(923..1321) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /note="AL3" FT /db_xref="GOA:Q3HM69" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q3HM69" FT /protein_id="ABA61317.1" FT /translation="MDSRTGELITARQAENGVYIWEISNPLYFKINRVEDPMYTASRVY FT HVQIRFNHNLRRALHLHKSFLNFQIWTTSLTASGTTYLTRFKYLVLLYLDRLGVISINN FT VIRAVRFATDKSYVNAVLENHSIKFKFY" FT gene complement(1068..1457) FT /gene="AC2" FT CDS complement(1068..1457) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transactivator protein; AL2" FT /db_xref="GOA:Q3HM68" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q3HM68" FT /protein_id="ABA61318.1" FT /translation="MRNSSSLTPPSIKVQHRVAKKRGIRRRRIDIECGCSIYVHIDCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDKQSGGSNVHREQSLPRPNTVQPQPEESI FT ASPQELPQLPDMDDFTDSFWDDIFN" FT gene complement(1399..2457) FT /gene="Rep" FT CDS complement(1399..2457) FT /codon_start=1 FT /gene="Rep" FT /product="Rep" FT /note="replication initiation protein; AC1; AL1" FT /db_xref="GOA:Q3HM67" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q3HM67" FT /protein_id="ABA61319.1" FT /translation="MPSAPKRFQIKAKNYFLTYPKCSLSKEEALSQLKTLNTPTNKKFI FT KVCRELHENGEPHLHVLLQFEGNYCCQNQRFFDLVSPTRSTHFHPNIQRAKSSSDVKSY FT VDKDGDTIEWGEFQIDGRSARGGCQTANDAAAEALNAPSKDVALQIIREKLPEKFLFQF FT HNLNSNLDRIFTRAPEPWAPTFPLSSFTSVPREMQAWADDSFGRGAAARPERPISIIIE FT GDSRTGKTMWARALGAHNYLSGHLDFNPRVYSNHVEYNVIDDIAPHYLKLKHWKELLGA FT QKDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKCFLDKEENASLNNWTKHNAKFVFL FT NTPLYQGTTQSC" FT gene complement(2040..2303) FT /gene="AC4" FT CDS complement(2040..2303) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q3HM66" FT /protein_id="ABA61320.1" FT /translation="MKMGSLISTCFFNLRATTAAKINDSSTWSPQQGQHISIRTFRELS FT HRPTSNPMSIRTEILSSGGNSKSTEEVLEAVARQLTTLPQKP" XX SQ Sequence 2593 BP; 665 A; 531 C; 599 G; 798 T; 0 other; accggatggc cgcgcgattt ttcacccctt tagtttcaat taaagtaaag tgattgtctg 60 tggcccaatc atattgggcc tgtcgagctt agatatttgt aacaagttaa ggcccaattt 120 gttgaacggc tataaattga acatacactt tacttttgct ttaattcaaa atgcctaagc 180 gtgatgcccc atggcgttta acggcgggaa cttcaaaggt ttcccgctct gtcaattatt 240 ctccccgtgc aggatatgga cccaaatata ataaggccgc tgagtgggtg aacaggccca 300 tgtacaggaa gcccaggatc taccgtactt tgagaggccc agatgttcct agaggctgtg 360 aagggccttg taaggttcag tcttacgagt ctcgtcatga tgtttcccat gtcgggaagg 420 tgatttgtgt gtctgacgtt acacgtggta acggtattac tcaccgtgtt ggtaagcgtt 480 tctgcgtgaa gtctgtatat attttaggga aggtatggat ggacgagagc atcaagttga 540 agaatcacac aaatagtgtg atgttctggt tggttagaga tcggagacct tattcgacac 600 ctatggattt tggccaggtg ttcaacatgt ttgacaacga gcctagcact gcaactgtta 660 agaacgatct tcgggatcgt tttcaggtca tgcacaagtt ttatgccaag gttactggtg 720 gacagtatgc cagtaatgag caggcattag tgaagcgctt ttggaaggtc aacaacaacg 780 tagtctacaa ccatcaggag gcagggaaat acgagaatca tactgagaac gccttgctat 840 tgtatatggc atgtactcat gcctctaacc ccgtgtatgc tacattgaaa attcggatct 900 atttttatga ttcgattact aattaataaa atttaaattt tattgaatga ttttcgagta 960 cagcatttac atatgatttg tctgttgcaa aacgaacagc tctgattaca ttattaatgg 1020 aaataacgcc taatcgatct agatacaata agactaaata tttaaatcta gttaaatatg 1080 tcgtcccaga agctgtcagt gaagtcgtcc atatctggaa gttgaggaag ctcttgtgga 1140 gatgcaatgc tctcctcagg ttgtggttga accgtatttg gacgtggtag actctgctcg 1200 cggtgtacat tggatcctcc actctgttta tcttgaaata gaggggattt gatatctccc 1260 aaatataaac gccattctct gcctgacgtg cagtgatgag ttcccctgtg cgtgaatcca 1320 tgtcctctgc agtcgatgtg tacgtaaata gagcacccgc actctatatc aattcgtcgt 1380 ctcctgattc ctcgtttttt agcaactctg tgttgtacct tgatagaggg gggtgttaag 1440 gaagacgaat ttcgcattgt gctttgtcca attatttaga cttgcatttt cttctttgtc 1500 gaggaaacat ttatagctgg ccccctcgcc aggattgcaa agcacgatgc atgggatacc 1560 acctttaatt tgaactggct ttccgtattt gcagtttgat tgccaatcct tttgggcccc 1620 aagcaattct ttccagtgct ttaactttag atagtgcggt gcgatgtcat caatgacgtt 1680 atattcaaca tgatttgaat aaaccctagg attgaaatct aggtgtccac tcaaataatt 1740 atgggcccct aatgcacgtg cccacatcgt ctttcccgtt cgagaatcac cttcaatgat 1800 gatactaata ggtcgttccg gccgcgcagc ggcacctctc ccaaaagagt catctgccca 1860 agcttgcatc tctctcggta cgctagtgaa agaggagagg ggaaacgtag gggcccatgg 1920 ctccggagcc cttgtaaata tcctatctaa attactattt agattgtgaa actgaaataa 1980 gaacttttca ggcagcttct cacggattat ctgcaaggcg acgtctttgg aaggtgcgtt 2040 caaggcttct gcggcagcgt cgttagctgt ctggcaaccg cctctagcac ttcttccgtc 2100 gatttggaat tccccccact cgatagtatc tccgtcctta tcgacatagg atttgacgtc 2160 ggacgatgac ttagctctct gaatgttcgg atggaaatgt gttgaccttg ttggggagac 2220 caggtcgaag aatcgttgat tttggcagca gtagttgccc tcaaattgaa gaagcacgtg 2280 gagatgaggc tccccatttt catggagctc tctgcaaacc ttgatgaact tcttatttgt 2340 aggagtgttt agggttttta attgggaaag tgcttcttct ttcgataatg agcatttggg 2400 atatgtgagg aaataattct tcgcttttat ttgaaagcgc tttggagctg atggcatatt 2460 tgtaaatatg acccttacta ccaaatggta gctgctctaa aactcatatc aattggtagt 2520 tatggtagct cttatatagt agaagttctc tttaaggaga ttgctacacg tggcggccat 2580 ccgttataat att 2593 //