ID   DQ193519; SV 1; linear; genomic RNA; STD; INV; 1481 BP.
XX
AC   DQ193519;
XX
DT   21-NOV-2006 (Rel. 89, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 4)
XX
DE   Cryptosporidium meleagridis isolate 1689 small dsRNA element, complete
DE   sequence.
XX
KW   .
XX
OS   Cryptosporidium meleagridis
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia;
OC   Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium.
XX
RN   [1]
RP   1-1481
RX   DOI; 10.1016/j.parint.2006.06.006.
RX   PUBMED; 16890010.
RA   Leoni F., Gallimore C.I., Green J., McLauchlin J.;
RT   "Characterisation of small double stranded RNA molecule in Cryptosporidium
RT   hominis, Cryptosporidium felis and Cryptosporidium meleagridis";
RL   Parasitol. Int. 55(4):299-306(2006).
XX
RN   [2]
RP   1-1481
RA   Leoni F., Gallimore C.I., Green J., McLauchlin J.;
RT   ;
RL   Submitted (06-SEP-2005) to the INSDC.
RL   Food Safety Microbiology Laboratory, Health Protection Agency, Centre for
RL   Infections, 61 Colindale Avenue, London NW9 5HT, UK
XX
DR   MD5; 7566ea9e6df906e49727c2b67fd94aa3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1481
FT                   /organism="Cryptosporidium meleagridis"
FT                   /host="Homo sapiens"
FT                   /isolate="1689"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /note="extrachromosomal small dsRNA element"
FT                   /db_xref="taxon:93969"
FT   gene            346..1305
FT                   /gene="CAP"
FT   CDS             346..1305
FT                   /codon_start=1
FT                   /gene="CAP"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:A0RZI8"
FT                   /protein_id="ABB02501.1"
FT                   /translation="MIEDFDTVEKKNAVYYPVDLKFVTDLSSDLANTADGLGQAWYKIS
FT                   QTEIEHIIMTALKINYVLNHRTLLLIHNKKVPDMDVINIIQSSIMVPRFVRDLIREILR
FT                   PMHHSGITYIPDLDLTTLPTPHMLDTFYPITGNLTKWHNVCQRLGFEMVPILPEAVQSV
FT                   SLTFYSYETDELLSFDNLINLDWRIEAFGWTKHLVHNPTSEVDDLGKSQIATSRKRAQE
FT                   RDYEVNDFRKVFERPVINRRILGMLVYRYTCTPYTMRLGYISPNYRFPTEKNHSETPPP
FT                   SNRVLLSEQTMVHSVRKKKFKPKKPKIVTTECSTDCSH"
XX
SQ   Sequence 1481 BP; 470 A; 283 C; 329 G; 399 T; 0 other;
     aagaggacac gaccccaata gagagggtgg tatagtctta tatattcatc atatataaag        60
     agacgagcca gagttggacg ttttccgatt ttcccgttct gcttctactt aaagaagttt       120
     gagcgtcagc ggtaagtcgg ctgcctaagt agaggcttac tgttaggagt aacattccct       180
     acgtatccat agcgagttac gatatagtgt tgccaccggg aagagaaaaa cttcaacggg       240
     aagtactatt tccagaagag aggtaaattg aggaggatat tccactccga gtcgcatgga       300
     gatttgtgta gtaccacaaa tgaaggcgct aattaatgtt accttatgat tgaagatttc       360
     gatacagttg agaaaaagaa tgcagtttac tatccagtag accttaaatt tgtcactgac       420
     ttatcttcgg accttgcgaa tacagctgac ggattaggcc aggcttggta taaaatttca       480
     caaaccgaga tagagcatat aatcatgaca gcattgaaga taaattacgt cttgaatcat       540
     agaacccttc tgttgataca caataagaaa gttccagata tggatgttat taatataata       600
     cagagttcca ttatggtacc gagatttgtt cgagatttaa ttcgagaaat attgagacca       660
     atgcatcaca gtggaatcac ctatattcca gatttggatc taactaccct acctacacca       720
     catatgttag atacattcta tcctataaca ggaaatctaa ctaagtggca caatgtttgt       780
     cagagattag ggttcgagat ggttccgatt ttaccggaag cagttcagtc tgttagtctc       840
     accttctatt catacgaaac tgacgaactt ttgtcctttg ataacctaat aaatctagat       900
     tggagaatag aggcatttgg ttggacaaaa catctcgttc ataatcctac gtcagaagta       960
     gatgaccttg gtaagtctca aatagccacg tccaggaaaa gagcacaaga gagggactat      1020
     gaagtgaatg attttaggaa agtgtttgag agacccgtaa taaaccgacg tatactaggt      1080
     atgctagtgt acagatatac atgtactcct tacacgatga ggttgggata cattagtcct      1140
     aactatcgat ttccaacaga gaagaatcat tctgagactc ctccgccgtc aaatcgagtg      1200
     ctgttgtcag agcagacgat ggtgcatagt gttcggaaga agaaatttaa accgaagaaa      1260
     ccaaagatag taacgacgga gtgtagcaca gattgctccc attaggatct gttgccagca      1320
     atcgtggttc tgcgaccaca cccctacgcc tatttaaaag tatagctctg gggctctcca      1380
     gcaggtaagg taatcccaca ccgcaagatg ggaagggccg cgggaagcct agaaccgggg      1440
     gattcatagg aaatcatctg aaacttgttt cttatgagag t                          1481
//