ID   DQ193518; SV 1; linear; genomic RNA; STD; INV; 1492 BP.
XX
AC   DQ193518;
XX
DT   21-NOV-2006 (Rel. 89, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 4)
XX
DE   Cryptosporidium hominis isolate 1912 small dsRNA element, complete
DE   sequence.
XX
KW   .
XX
OS   Cryptosporidium hominis
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia;
OC   Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium.
XX
RN   [1]
RP   1-1492
RX   DOI; 10.1016/j.parint.2006.06.006.
RX   PUBMED; 16890010.
RA   Leoni F., Gallimore C.I., Green J., McLauchlin J.;
RT   "Characterisation of small double stranded RNA molecule in Cryptosporidium
RT   hominis, Cryptosporidium felis and Cryptosporidium meleagridis";
RL   Parasitol. Int. 55(4):299-306(2006).
XX
RN   [2]
RP   1-1492
RA   Leoni F., Gallimore C.I., Green J., McLauchlin J.;
RT   ;
RL   Submitted (06-SEP-2005) to the INSDC.
RL   Food Safety Microbiology Laboratory, Health Protection Agency, Centre for
RL   Infections, 61 Colindale Avenue, London NW9 5HT, UK
XX
DR   MD5; 08b071d8bc0093f224531296e5421a6b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1492
FT                   /organism="Cryptosporidium hominis"
FT                   /host="Homo sapiens"
FT                   /isolate="1912"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /note="extrachromosomal small dsRNA element"
FT                   /db_xref="taxon:237895"
FT   gene            347..1306
FT                   /gene="CAP"
FT   CDS             347..1306
FT                   /codon_start=1
FT                   /gene="CAP"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:A0RZI7"
FT                   /protein_id="ABB02500.1"
FT                   /translation="MTTSFESIVKKNAVYYPVDLKFVTDLSSDLANTADGLGQAWYKIS
FT                   QVTVEQIILTALKINYVLNHRTLLLIYNKKVPDMDVINIMQSSIMVPRFVRDLIREILR
FT                   PMHHSGITYIPDVDLSTLPTPHMLDTFYPISEHLTRWNNVCQKLGYEMVPILPEAVQSV
FT                   SLTFYSYETDELLSFDNLINLDWRIEAFGWTKHLVYNPTSEVDDLGKSQLATSRKRVQE
FT                   KDYECNDFRKVYERPLINRRILGMIVYRYTCAPYTTRLGHLCPNFRFPTEKNHSETPPT
FT                   SNRVLLSEQTMVHSIQKTKSKPKKVKIVTTECSADRSH"
XX
SQ   Sequence 1492 BP; 480 A; 284 C; 317 G; 411 T; 0 other;
     aagaggaaca ttgactcaat tagagagaag tcatagaagt ttatatgttc ccatcacata        60
     taagagacga gcccgagatg acgtttccaa ttccgttctg ctcttttaaa agagtttgag       120
     cgtagcgata agtcgactga caaatcagag gcttattgtt aggagtacca ctccctacgt       180
     agtcatagcg tattacgata tagtgttacc accgggaaga gaaaaacttc gacgggaagt       240
     actatttcca gaagagaggt gtaattaagg aggaaaattc cactccgagt cgcatggaga       300
     tttgtgtagt accacaaata aggcgcaaaa tttataccca ctattcatga ctacaagttt       360
     tgaatcaatt gtgaaaaaga atgcagttta ctatccagta gatttgaaat ttgtcactga       420
     cttatcttcg gatcttgcga atacagctga cggattaggc caggcttggt ataaaatttc       480
     acaagtcacg gtagagcaaa taatcctaac ggcattgaag ataaactatg tcttgaatca       540
     tagaaccctt ctgttgatat acaataagaa agttccagat atggatgtga ttaatatcat       600
     gcaaagttca attatggttc ctagatttgt acgagattta atccgtgaaa ttttaagacc       660
     aatgcatcat agtggaatca catatattcc agacgtggat ctttccaccc taccaactcc       720
     acacatgtta gatacctttt atccaatatc agaacatcta actagatgga ataatgtttg       780
     tcagaagtta gggtacgaga tggttccgat tttaccggaa gcagtacaat ctgttagtct       840
     caccttctac tcatacgaaa ctgatgaact tttgtccttt gataacctta taaatctaga       900
     ttggagaata gaggcatttg gttggacaaa acacttagta tataatccca catcagaagt       960
     agatgacctt ggtaaatctc aattagccac gtccaggaaa agagttcaag agaaggatta      1020
     tgaatgtaat gattttagga aagtatatga gcgacccctc ataaaccgtc gcatattagg      1080
     tatgattgta taccgttaca catgcgcgcc gtatactacg agattgggcc atttgtgtcc      1140
     aaatttcaga tttcctacgg agaagaatca ttcagagaca cctccgacgt caaatcgagt      1200
     gctgttgtca gagcagacga tggtgcatag tattcaaaag acaaaatcta aaccgaagaa      1260
     ggtgaagata gtaacgacgg agtgtagcgc agatcgctcc cattaggatc tgttgccagc      1320
     aatgttggtt ctgtgaccac acccctacgc ctatttcaaa gtatagctct ggggctctct      1380
     agcagttaag gtatcccaca ccataagatg gggcgggccg cgggaagcct agaaccgggg      1440
     gattcatagg aaatcattag aacttgtttc ttatgaaagt agctatgatc gg              1492
//