ID DQ192235; SV 1; linear; genomic RNA; STD; VRL; 4170 BP. XX AC DQ192235; XX DT 29-OCT-2005 (Rel. 85, Created) DT 29-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Operophtera brumata reovirus segment 1, complete sequence. XX KW . XX OS Operophtera brumata reovirus OC Viruses; Riboviria; Reoviridae; unclassified Reoviridae. XX RN [1] RP 1-4170 RA Graham R.I., Rao S., Possee R.D., Sait S.M., Mertens P.P.C., Hails R.S.; RT "Detection and characterization of three novel species of reovirus RT (Reoviridae), isolated from geographically separate populations of the RT winter moth Operophtera brumata (Lepidoptera: Geometridae) on Orkney"; RL Unpublished. XX RN [2] RP 1-4170 RA Graham R.I., Rao S., Possee R.D., Sait S.M., Mertens P.P.C., Hails R.S.; RT ; RL Submitted (04-SEP-2005) to the INSDC. RL Molecular Biology, Institute for Animal Health, Ash Road, Pirbright, RL Woking, Surrey GU24 0NF, United Kingdom XX DR MD5; 10c2c99fff4d1983d29ba1a9570054e4. XX FH Key Location/Qualifiers FH FT source 1..4170 FT /organism="Operophtera brumata reovirus" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:352248" FT CDS 33..4109 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="RdRp" FT /db_xref="GOA:Q30C85" FT /db_xref="UniProtKB/TrEMBL:Q30C85" FT /protein_id="ABB17205.1" FT /translation="MDSTRQVSLTLQQITKRLHLLISTQHNLTSSKQDTLTVQTNSIAF FT KAWYDTLQRRTDILFNKTELTLEDITGFDTSSQVGIYHTSLILLLLQEIKFRVTLSSSA FT ESDLERIVSPPHYEFGTSSFRVNELDQHIEAASVRYVLNYDAYKIVRDAEAIQLVSKKV FT RKVVSDELLEDKIVQYSSGDVNLYREADVMHGLVIKYVSQPRLLPIPKLIQMIIETSNF FT PERGFELHENPVLYIISRLLSKYIDFPFTEKSGEMVYHHSVSMTTPHLIYSLSQLWIQY FT ILNNVTRSELYMMVECHVMLSVKSFDEFVLEFKDLRINSSKILTEMVKQAFIPIYGSVA FT PAGIMLKEDFSDIWRDGEREQFGTDFLQLCPMPLQKYLTDRRIIVNSQFTLGKIFEDDN FT EARRTHLIITLSTQHGLFIKNPVIFTIDKSVHPRPSLGVGYDIKEYMVNPSDQTDSYPL FT TLLWKSSVTQSIRDELLGMIRPYGDRIRSMDLFQEFIRCLTNNSGGIPYEPTPEETKTI FT PAGVLRALGRKRLMFFLLNPTVFSVYSAWRKAVETPTSSGERKQVDRRGRVIQMVSNPA FT QIGAFLLFLIADTIGSQEPEFSSKKNSGTINDMMFQLSESGVNGVVYECADVKGMDAAT FT TKTLCALTGELVVDLFREHNGMTYFWAQSKDWNVVDSNGTSRRERIAAPIEVFRACEKF FT ADTTPFRLHEPETFGHVTTSPDSFPSGKFSTNAQHSFINAGAVRSWGKSFNRQMLQSKD FT SNERLTQPVRVTSLISGDDLTIKVIYGNETVKALLAFSDGLQRHYANIGLSLESVLSKY FT SATFLQMTAVLGKPWPKADRISIVTSEHGDAQRVEFREAMAEVIDVLRELSGRSGIPSN FT WVPIALVMGNMLRRLRVVISDTFNPVTEEHLQDDRILKRGNSIYIKIPFITLFIKEGLG FT LPFLATNFLNRVERQLSYAPRGSLSDWHLRRILLKRDPFEYITSNGSQRIYDFYAHYAQ FT ELHEKRLMSDISAFEDAERRIIAEVYGTPSDWYDGALADKLDLDLAVYIAKFDPSTRVK FT QARRRAIPASERDRWTRNLASQLNFQAITKSALAHMTLKELRYNVPEEIAFHHSPAERI FT NQLLESVQGGYEEFMMLRRESLLYRLRYKPGVRWIGPDSIESLLLFNPVILDSEYELHR FT DVVLDRKCKYMPSSTSDFDRTFGAIQIWDTTSLKIFKVFSGYYGYRPGPFKEYNHEALV FT KFAAQVYHTNPTHLPYVWHLANIQGRHRQTLSRMIKHMAVTLGSSWGSTVHTRQLFEIG FT KDPRAIIRCFELPSRLHQRAEDTAALVARDLHLAYGSYGLNQVMIQLHPLFIRQTDGTR FT ERNTLLRMLTKKVIE" XX SQ Sequence 4170 BP; 1218 A; 772 C; 928 G; 1252 T; 0 other; aaataaaacc cctccacaat agaaccagac ccatggactc aacgcgtcaa gtatccctta 60 cactgcaaca gattacaaaa cgactacact tacttatttc cacgcaacat aatctgacct 120 cctcaaagca agatacacta acagtacaga ccaatagtat tgcatttaaa gcatggtatg 180 atacactaca acgaaggaca gacatattat tcaacaagac ggaactaaca cttgaggata 240 ttactggatt tgacacatca agtcaggttg gcatctatca cacgagcttg attttattac 300 tactgcaaga aattaaattt agagttacat tatcatcgtc agctgaaagt gatctggaac 360 ggattgtatc accaccacat tatgaatttg gaacatcatc atttagagtt aatgaattgg 420 atcagcatat tgaagcagca tccgtgagat atgtcttaaa ttacgatgct tataagattg 480 ttcgagatgc tgaggcaatt caactcgttt caaagaaggt tcgtaaggtt gttagtgatg 540 agttgcttga ggataagatt gttcagtatt cttcaggaga tgtcaaccta tatcgtgagg 600 cggacgttat gcatggttta gtcattaagt atgtttccca gccacgtcta ttaccaattc 660 caaagttaat tcaaatgatc attgaaactt ccaattttcc agaacgcggc tttgaacttc 720 acgagaatcc ggtattatac ataatttcac gtttgttgag caaatatatt gactttccat 780 tcacggaaaa gtcgggtgag atggtttatc atcattcggt tagtatgaca acgccacatt 840 taatttactc gctttctcag ctttggattc agtatatatt aaacaatgtt acgagaagtg 900 aattatacat gatggtcgaa tgtcatgtta tgttgagcgt taaatccttt gatgagtttg 960 ttctcgagtt taaagattta cgaattaatt caagtaaaat tttaactgaa atggttaagc 1020 aagcattcat tccaatttat ggatctgtcg cgccagcggg cattatgctg aaagaggact 1080 ttagtgatat ttggagagat ggtgagcgtg aacagtttgg aacggatttc cttcaattat 1140 gtccaatgcc acttcagaag tatcttacgg atcggcgcat tattgtaaac agccaattta 1200 cccttggaaa gatatttgaa gatgacaatg aggcgagacg cacacatctt attattaccc 1260 tttcgactca acatggatta tttatcaaga atccagtaat atttacaatt gataaatctg 1320 ttcatccacg accatccctt ggcgttggat atgatattaa agagtatatg gtcaacccgt 1380 cagatcagac tgattcttat cctttgacat tactttggaa aagctcagtg acgcaatcaa 1440 ttcgtgatga gctcttaggg atgattagac cgtatggcga tcggattcgt agcatggatt 1500 tatttcaaga gtttattcgc tgtttaacaa ataattcagg tggtattcct tatgaaccaa 1560 ctccagaaga aacgaagacg attccagctg gtgtacttag agcccttggg agaaaacggt 1620 taatgttttt cttgctcaat ccaacagtat tttcagtata tagcgcatgg cgtaaagcag 1680 ttgagacacc aacatcgtca ggtgagcgga aacaagtcga tcgtcggggc agagttattc 1740 agatggtttc aaacccagct caaatcggtg ctttcctatt attcctgatt gcagatacca 1800 ttggaagtca agaaccagag ttttcttcga aaaagaattc aggcaccatc aacgatatga 1860 tgtttcaatt atcagaaagt ggcgttaatg gtgttgtata cgagtgtgct gatgtgaagg 1920 gcatggatgc tgcaactacg aaaactcttt gtgcgttaac aggtgagctt gtggtcgatc 1980 ttttccgaga acacaatgga atgacatatt tctgggctca aagtaaggat tggaacgtcg 2040 tcgattcaaa tggaacaagt cgtcgtgagc ggattgcagc cccaattgag gtttttcgcg 2100 cgtgtgagaa gtttgctgat acaactccct ttagactcca cgaaccagaa acttttggac 2160 atgttacaac ttcaccagat tcgtttccat ctggaaaatt ttcaacgaat gcgcaacata 2220 gctttatcaa cgctggtgct gttagaagct gggggaaatc atttaaccgt caaatgcttc 2280 agtctaagga ttcgaatgaa cgattgactc aacctgtacg agtcacttca ttaattagtg 2340 gggatgattt aactattaaa gttatttatg gaaatgagac ggttaaagca cttttagctt 2400 ttagtgacgg tttacaacga cattatgcta atattggatt gtcgcttgaa agtgtattgt 2460 caaagtattc agcaaccttt ctacagatga ctgcggtact gggaaagcct tggcctaaag 2520 cagatcggat ctcgattgtc acatctgaac atggtgacgc tcaacgagtc gagtttcgtg 2580 aagcgatggc tgaggttatt gatgtacttc gagagttgtc aggacgttca ggtattcctt 2640 caaattgggt tcctatagct ttagtaatgg gtaatatgtt gcgccgatta cgcgtagtta 2700 tctccgatac tttcaaccca gttacggagg aacatttaca agatgatcgt atattgaagc 2760 gtggtaattc gatttacata aagattccat tcattacctt gtttatcaag gaagggctag 2820 gattaccatt tctggcgacg aattttctga atagagttga aaggcagttg agttacgcac 2880 cacgaggatc actcagtgac tggcatcttc gaagaattct attgaagcgt gatccgtttg 2940 aatatattac atctaatggg agtcagagga tttatgactt ctacgcacac tatgctcagg 3000 agcttcacga aaaacggtta atgtcagaca tttcagcttt cgaggacgca gagagaagaa 3060 tcattgctga ggtttatgga acgccaagtg actggtatga tggtgcgttg gctgacaaac 3120 ttgatttgga tctcgctgta tatattgcaa agtttgatcc aagtacgcgt gttaaacagg 3180 caaggcgtcg tgccattcca gcatctgaga gagataggtg gacgcgtaat ttagcgagtc 3240 aactgaattt tcaggcaatt accaagtcgg cactcgctca catgacatta aaggagttgc 3300 gttataatgt accagaagag attgcctttc atcattcacc tgctgagaga ataaatcagt 3360 tacttgagag tgttcaaggt ggttatgagg agtttatgat gctacggcgg gagtcgttgt 3420 tgtatcgact gcgttataag ccgggagtac gttggattgg cccggattcg attgagtcgt 3480 tgttattgtt caacccagtt atccttgact cggaatatga gttacatagg gacgttgttc 3540 tagatagaaa gtgtaagtac atgccatctt caacttccga ctttgatcga acatttggtg 3600 ctatccagat ttgggataca acttctttga aaattttcaa ggtgtttagt gggtactatg 3660 gttatcgacc aggaccattt aaggagtata atcatgaggc tttagttaag tttgcggctc 3720 aagtttatca tacaaatcca acacatcttc catatgtatg gcatctcgcg aacattcaag 3780 ggaggcatcg tcaaacgttg agtagaatga taaagcatat ggcagtaact ctcggatcga 3840 gttggggatc gacagtacat acacgtcagt tgtttgaaat cggtaaggat ccgcgagcga 3900 tcattaggtg ttttgagtta ccatctcgac ttcatcaacg agctgaggat accgccgctc 3960 tcgttgctcg tgatttacat ttagcttacg gaagttacgg tttgaaccaa gtaatgattc 4020 aactgcatcc actttttatt cgacaaacgg atggtactag ggagcgtaac acattactac 4080 gtatgcttac caagaaggtc atcgaatgat agtttgcttg gagaacgatc tcgttgacta 4140 ccggtgtgtt ctatggggcc cgatgaggtt 4170 //