ID DQ178611; SV 1; circular; genomic DNA; STD; VRL; 2494 BP. XX AC DQ178611; XX DT 21-SEP-2005 (Rel. 85, Created) DT 21-SEP-2005 (Rel. 85, Last updated, Version 1) XX DE Cabbage leaf curl Jamaica virus clone 1966 Cu3-B8 segment DNA-B, complete DE sequence. XX KW . XX OS Cabbage leaf curl Jamaica virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2494 RA Smith K.N., Roye M.E., McLaughlin W.A., Maxwell D.P.; RT "Leaf curl disease of Brassicas in Jamaica: Specifically examining RT interspecific recombination between a crop and weed virus"; RL Unpublished. XX RN [2] RP 1-2494 RA Roye M.E., Smith K.N., Maxwell D.P.; RT ; RL Submitted (24-AUG-2005) to the INSDC. RL Biotechnology Centre, University of the West Indies, Mona, 1 St John's RL Road, Kingston, Jamaica XX DR MD5; 4762c2be92d0cc5d0891ee6e63303214. XX FH Key Location/Qualifiers FH FT source 1..2494 FT /organism="Cabbage leaf curl Jamaica virus" FT /segment="DNA-B" FT /host="cauliflower" FT /isolate="CUc-3" FT /mol_type="genomic DNA" FT /country="Jamaica" FT /clone="1966 Cu3-B8" FT /db_xref="taxon:345184" FT gene 375..1145 FT /gene="nsp" FT CDS 375..1145 FT /codon_start=1 FT /gene="nsp" FT /product="NSP" FT /note="nuclear shuttle protein" FT /db_xref="GOA:Q3LTP8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q3LTP8" FT /protein_id="ABA26607.1" FT /translation="MYPTKFRRGTSYSHRRFVSRNPSFKRGTLVRRTDGKRRKGPSSKA FT HDEPKMKLQRIHENQYGPEFVMTHNSALSTFINFPVLGKIEPNRSRSYIKLNRLLFKGT FT VKIERVHADVNMDGVSSKIEGVFSLVIVMDRKPHLSSAGGLHTFDEIFGARIHSHGNLA FT ITPGLKDRYYVLHVFKRVLSVEKDTLMVDLEGSTMISNRRYNCWASFNDLEHDSCNGVY FT ANISKNAILVYYCWMSDAMSKASTFVSYDLDYLG" FT gene complement(1204..2085) FT /gene="mp" FT CDS complement(1204..2085) FT /codon_start=1 FT /gene="mp" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:Q3LTP7" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q3LTP7" FT /protein_id="ABA26608.1" FT /translation="MDSQLANAPNAFNYIESHRDEYQLCHDLTEIVLQFPSTAAQFTAR FT LNRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDDESLQASWTFPLRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIHS FT KQFSHRDVDFSHVDYGKWERKTLRSRSLSRIGLTGPIELQPGDSWASRSTIGLTNPQTE FT SEVENALHPYRELNQLGTSALDPGDSASQAGLQRAQSTITMSVAQLSELVRTTVQECIN FT NNCNPTQPKSLQ" XX SQ Sequence 2494 BP; 691 A; 464 C; 540 G; 799 T; 0 other; accggatggc cgcaaatttt ttggcgtcct ggtgctgggg accatctccc ggcccccctt 60 ggcgcactat ctctcatctt tcgacgtggc gcgtcgatga gcgttggcta acgcttatct 120 cggtgttaga cctttaattt gaatttcgaa ataattggtc gtatatatct atcttgaccg 180 gtctttgtga cgacaaagct tctgacacat tgtacgatat attgagcgtg gtccaattat 240 attttctctg cggagttaga ctatcgctta ttgttattca tcttgtctat ataatggacg 300 ataggttaat aatttaaatc gtctttgaca ataacattta aataacaaat cattttgtag 360 aggagctgag aataatgtat cctacaaagt ttaggcgtgg gacttcttac tctcatagac 420 gatttgtttc acgtaatccc tcttttaagc gtggaacttt ggttagacgc actgatggga 480 aacgtcgtaa aggcccatca agcaaagccc atgatgagcc taaaatgaaa ttacaacgca 540 tacatgaaaa tcaatatggg cctgaatttg tcatgaccca caactcagct ctttcaacat 600 tcattaattt cccggtactt gggaagatcg aacctaaccg aagcaggtcg tatattaagt 660 tgaatcgttt attatttaag ggaaccgtta agattgagcg tgtgcacgct gatgtgaaca 720 tggacggagt aagttcgaag atagaaggtg tgttctctct tgttattgtt atggatcgca 780 agccacattt gagttccgct ggaggtttgc atacatttga tgaaatattt ggtgcaagaa 840 tccacagcca tggtaactta gctattacac ccggtttgaa agatcgttat tacgtgctcc 900 atgttttcaa acgcgtattg tctgtggaga aagacacttt gatggtggat cttgaaggat 960 cgaccatgat atctaatagg cgttataact gttgggcctc gtttaacgat cttgaacatg 1020 actcatgtaa cggtgtttat gcgaatataa gcaaaaatgc cattttagtt tactattgtt 1080 ggatgtccga tgctatgtct aaggcatcga cctttgtatc ttacgatctt gattatttag 1140 gttaatcctg aataaaatgg cgttaagatt gaatatatac ataaaaaata aaaacaagca 1200 attttattgc aatgactttg gttgtgtagg attacaatta ttgttaatac attcctggac 1260 cgtcgtccta actagctcgc ttaattgggc cactgacatc gttatggttg attgggccct 1320 ctgtaatcca gcttgtgatg ctgaatcccc ggggtctaat gcgctagttc ctagctggtt 1380 gagttctcta tatggatgta gcgcattctc cacttctgat tcagtttgtg ggtttgtaag 1440 cccaatagtg ctccttgaag cccatgaatc acctggttgt aattcaattg ggcctgttag 1500 tccaattctt gacaatgatc tggacctcaa cgttttcctc tcccattttc cgtagtccac 1560 atgggagaaa tcaacatctc tatgtgaaaa ttgtttggag tgaattttca ctgttggtgc 1620 ccggaagggt atatccactg aatgtttagc tgttgacaat ttcaatttcc ctttaaactt 1680 ggcaaaatgt gttcgttgat gcacatttgt gtcgctaacc ctgtaataga gtttccacgg 1740 aatagggtct tttagcgaga agaatgaaga tgaaaaatag tggagatcta tgttgcatct 1800 taagggaaat gtccaagacg cctgtaagga ttcatcgtca gtcatcctct tatcatggat 1860 ctctacaatc accgtcccgg ttgcgttaat tggtacttgc tgtctatatt cgatgacgca 1920 atggtcgatt ttcatacagc tacgattaag ccttgctgta aattgcgctg cagttgaagg 1980 gaattgcagt actatttcag taagatcatg acatagctga tattcgtctc tatgagactc 2040 tatgtaatta aacgcatttg gagcatttgc tagctgagaa tccatctata gaaatctgcc 2100 cgcgcagcgg cagaggcttc aataatatct gggttcaaga ataattgtgt tgaagaacac 2160 aacaatgaaa cgacttgttt cacaaggagg aagagagaat atctgggctt gttaacaaga 2220 agaaaataat gatattttaa aggaatgatg aatatgttat gttattccga taacatgagt 2280 ataataatct aagtccacct tgtttatata gagagtgatt ttccagaagt tggaaacgcc 2340 ttgaatttca ttttagtggc attattgtaa atatgggtgt tcccccgata gcgctctcgc 2400 tcaaaactcc tatgaattgg gggaactggg ggaacttata tagtagaagt tcctaaaggc 2460 aaatcaacac gtggcggcca tccgttatag tatt 2494 //