ID DQ173015; SV 2; linear; genomic RNA; STD; VRL; 2896 BP. XX AC DQ173015; XX DT 14-SEP-2005 (Rel. 85, Created) DT 22-APR-2009 (Rel. 100, Last updated, Version 3) XX DE Thielaviopsis basicola mitovirus RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Thielaviopsis basicola mitovirus OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2896 RX DOI; 10.1094/PHYTO-96-0468. RX PUBMED; 18944306. RA Park Y., Chen X., Punja Z.K.; RT "Molecular and Biological Characterization of a Mitovirus in Chalara RT elegans (Thielaviopsis basicola)"; RL Phytopathology 96(5):468-479(2006). XX RN [2] RP 1-2896 RA Park Y., Punja Z.K.; RT ; RL Submitted (17-AUG-2005) to the INSDC. RL Biology, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A RL 1S6, Canada XX RN [3] RC Sequence update by submitter RP 1-2896 RA Park Y., Punja Z.K.; RT ; RL Submitted (07-NOV-2005) to the INSDC. RL Biology, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A RL 1S6, Canada XX DR MD5; c3cc15b7049136ef8c8db8145ccb5c1e. XX CC On Nov 7, 2005 this sequence version replaced gi:74137018. XX FH Key Location/Qualifiers FH FT source 1..2896 FT /organism="Thielaviopsis basicola mitovirus" FT /host="Thielaviopsis basicola strain HA2" FT /mol_type="genomic RNA" FT /db_xref="taxon:274584" FT CDS 428..2545 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q3S3F3" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q3S3F3" FT /protein_id="AAZ99833.1" FT /translation="MIKYMKSVRLHITRYICRKPLFINNSGVSVDKSGFPTKFIELKKF FT LNNHESSICYHTRLRIILTLLLLPRGLKPTKAEDAKIKPNFSSITLPFSGTRMNPIPTW FT FIKEFVKEYNLKLEKPTYDLSKHYLSPKGGPMGKSTWSSIWSMYALKHELHLSLSYFLG FT EAYKTLFYLPYLKNMALSYGHDVPPKQWPSGKLGIVKDPEGKRRIIAMVDYHSQLVLRS FT IHDGLLNKLRNLPQDRTYNQDPNNAWEENKECFHSLDLSSATDRFPVKLQSRLLTEMYS FT DPSFGENWMNLLLNRDYLLPEEGLSGERLRYAVGQPMGAYSSWAAFTLSHHLVVAWCTY FT KSKKVIRSSQYIILGDDIVIKDNDIARKYIGQMSKLGVAISMQKTHVSKDTYEFAKRWV FT HKGVEISGLPLKGIFYNISHMRRMYTIIFDYLQRIPSKSNLTSLQLFASCLSGIKFGKR FT VYSKALILKLLRNFNISLRYSYGLLTPYELREYILTGFNMGEEVLPSDNRILEWFKGII FT CDGVAGKVSTLSREYTKEVDSLEEHKSSQHILNSINIEITYENLQWSPLIIGMFNHINK FT VSEKCGEWLYGDVPLMDIIQQFTLPSADSLSRKDRDINKKVDELDSLIFKSIKRHFSDQ FT PYPDHFYGTRSNGDKYLYPGLGALDVNVAPEIGFEIKSPINFILKTEIQRLHGNLEMQM FT EKPLREAGINC" XX SQ Sequence 2896 BP; 1012 A; 454 C; 489 G; 941 T; 0 other; ccgtttctcc ccttttgggg agaggcggct atttcttata tagttataac tatataacaa 60 gtagaaacaa gactcgaaag agcagattgg accttattaa ggtatcccag tctagtcact 120 ggttatgact caaataacaa actacatagt tttgtaccag ggcctgataa gctttgtgta 180 acatctatgc tgtgaataac agaaacaaaa tatttcaatt attacaacaa actttaacaa 240 caatttatta aagcttaaag ctaacatttt aaacaaaagt ttaaaattcc aaggaggggt 300 ctccccctta cttgttaaat taactataaa ccttataata aatatatttg gaaaagttga 360 ttatagaatt attaagaatt ttctatctga gataaccaaa ttatgaagaa ataatggttt 420 cttatatatg attaagtata tgaaatctgt tagattacat ataactcgat acatatgtag 480 aaaaccgtta tttattaata attcaggtgt ttcagtagat aaaagtggat ttccaactaa 540 gtttatagaa cttaagaaat ttttaaataa ccatgaaagt agtatttgtt atcatactag 600 attacgtata attttaacat tattgcttct acctcgtgga ttaaaaccca caaaggcaga 660 agatgctaaa attaaaccta attttagttc gataacttta ccattttcag ggactagaat 720 gaatcccatt cccacttggt ttattaaaga atttgttaag gagtataacc ttaaattgga 780 gaaaccaacc tatgacctaa gtaaacatta cttgagtcca aagggaggtc cgatgggaaa 840 atctacatga tcatcaatat gatcaatgta tgctcttaaa cacgaacttc atttatcact 900 atcatatttc ttaggtgagg catataaaac attgttttat cttccttatc tgaaaaatat 960 ggcattgtct tatgggcacg atgtgccccc aaaacaatgg cctagtggta aattaggtat 1020 tgttaaagat ccggaaggta aaagaagaat aattgcaatg gtagattacc attcacaatt 1080 agttcttcgt tcaatccatg atgggcttct taataaatta agaaacctac cacaggatag 1140 aacatacaat caagatccta acaatgcgtg agaagagaat aaggaatgtt tccattcctt 1200 agatttatca tcagccactg atagattccc agtaaaactg caatctagac tgcttacaga 1260 gatgtattca gatcctagtt ttggagagaa ctgaatgaat ctgctcttaa atagagatta 1320 tctattacca gaagaaggcc tatcgggtga aagattgcgt tatgcagtcg gtcaaccgat 1380 gggtgcttat tctagttgag cagcattcac actttctcac cacttagtag ttgcctgatg 1440 tacttataaa tcaaagaagg tcataagatc ttctcaatat attatacttg gtgatgatat 1500 tgtcattaaa gacaatgaca tcgcaagaaa gtatattgga caaatgagta aattaggtgt 1560 tgctatttca atgcaaaaga cacatgtatc gaaagataca tatgaatttg caaagagatg 1620 agtgcataaa ggagtggaga tttcaggatt acccttgaaa ggtatctttt ataacatatc 1680 tcatatgcgt cgtatgtata cgatcatatt tgattattta caaaggatcc cttccaagtc 1740 taatttgact tctctgcaac ttttcgcatc ttgtttaagt ggtattaaat tcggtaaaag 1800 ggtatattct aaagcgttaa tacttaagtt actacgtaac tttaatattt cgctccgtta 1860 ctcatatggg ttgttaactc catatgaatt acgtgaatat attcttacag gatttaatat 1920 gggagaagaa gttcttccat cagataatag aatccttgaa tgattcaagg gtattatatg 1980 tgatggagtt gctggaaaag tctcaaccct ttctcgtgag tacactaagg aggtggacag 2040 tttagaagaa cataaatcat ctcaacatat attgaattca ataaatattg aaataactta 2100 tgaaaatcta caatgatcac cacttatcat aggtatgttt aatcatatta ataaagtatc 2160 tgagaagtgt ggagaatgat tgtatggtga tgttccatta atggacatta tccaacaatt 2220 tactctacct tcagcagatt ctttatcaag aaaagaccga gatataaata aaaaggttga 2280 tgaattagat tcattaatct ttaaatctat caaacggcat tttagtgatc aaccataccc 2340 agatcacttc tatggtacaa ggtccaatgg agataaatat ttatatcctg gacttggtgc 2400 cttagacgtg aatgtagctc ccgaaattgg ctttgaaatt aaaagcccga ttaattttat 2460 ccttaaaact gaaattcaaa gattacatgg taatcttgaa atgcagatgg aaaaacctct 2520 tcgggaagct ggaattaatt gttagaacat ggagtagtta ccatgtctac cgctttaatc 2580 cagattattt taatggaaga gtatggaata gttaccatac ctcccgctta aaatacaaat 2640 agttcaaagt gagactatat ataataatat tgctataaac aactgttaat taaagtgctg 2700 ggtttatcca tacttttagc tttatttaac agatgaagtt gaagtgctgg gtttacccat 2760 acctttagct taacttaaca tccaaattta tttgttatcg ttataactta gttaccaagt 2820 tgtgattaac atgttcacaa cttgtcttaa ggttatagcg ccgtaattct ctgaacttaa 2880 aagttcagag gaacgg 2896 //