ID   DQ172906; SV 1; circular; genomic DNA; STD; VRL; 2063 BP.
XX
AC   DQ172906;
XX
DT   04-MAY-2006 (Rel. 87, Created)
DT   04-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Starling circovirus, complete genome.
XX
KW   .
XX
OS   Starling circovirus
OC   Viruses; Circoviridae; Circovirus.
XX
RN   [1]
RP   1-2063
RX   DOI; 10.1099/vir.0.81561-0.
RX   PUBMED; 16603520.
RA   Johne R., Fernandez-de-Luco D., Hofle U., Muller H.;
RT   "Genome of a novel circovirus of starlings, amplified by multiply primed
RT   rolling-circle amplification";
RL   J. Gen. Virol. 87(Pt 5):1189-1195(2006).
XX
RN   [2]
RP   1-2063
RA   Johne R., Muller H.;
RT   ;
RL   Submitted (17-AUG-2005) to the INSDC.
RL   Faculty of Veterinary Medicine, University of Leipzig, Institute for
RL   Virology, An den Tierkliniken 29, Leipzig 04103, Germany
XX
DR   MD5; d45d4ec22f24317287606a7e70754451.
DR   EuropePMC; PMC3133700; 21177928.
DR   EuropePMC; PMC3647419; 23628223.
DR   EuropePMC; PMC3668005; 23723397.
DR   EuropePMC; PMC5165205; 27795441.
DR   EuropePMC; PMC6160883; 30078831.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2063
FT                   /organism="Starling circovirus"
FT                   /host="European Starling (Sturnus vulgaris)"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:349370"
FT   CDS             37..906
FT                   /codon_start=1
FT                   /product="putative replication-associated protein"
FT                   /db_xref="GOA:Q1L2D4"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q1L2D4"
FT                   /protein_id="ABB59613.1"
FT                   /translation="MAVRGSAAKRWCFTLNNPTEEEIAAVKAWQHSEYHYAIVGKEKGE
FT                   QGTPHLQGFIHLKKKVRLTSLKKVLQRAHWEKARGSDEDNEKYCSKEGDVILTIGIPVK
FT                   GNRSDLAGAVAAVKAGRGMSEIAREFSETYVRYGRGLRDLALLIGQKQRDFKTEVTVLT
FT                   GPSGVGKSRWANEQVGTKFYKMKGDWWDGYCNEDIVIIDDFYGWIPFCELLRLCDRYPH
FT                   KVPVKGSYVEFNSKQIIITSNTPPDSWYNEDKCYVQALFRRINRWLVWDATQFVDAPEV
FT                   MKKYPINY"
FT   CDS             834..1154
FT                   /codon_start=1
FT                   /product="unknown"
FT                   /note="ORF3"
FT                   /db_xref="UniProtKB/TrEMBL:Q1L2D3"
FT                   /protein_id="ABB59614.1"
FT                   /translation="MACVGCHPVRGCTGSDEEVSDQLLTGNGNDVTGNDDTRDLVIIKN
FT                   KTGGPGGSPSPPRSGGLIRALPPRCRGPLAVHDREGAVGDRSVSPGPKARVYTRPRGKK
FT                   NK"
FT   CDS             complement(1190..2020)
FT                   /codon_start=1
FT                   /product="putative capsid protein"
FT                   /db_xref="GOA:Q1L2D2"
FT                   /db_xref="InterPro:IPR003383"
FT                   /db_xref="InterPro:IPR038652"
FT                   /db_xref="UniProtKB/TrEMBL:Q1L2D2"
FT                   /protein_id="ABB59615.1"
FT                   /translation="MLLSRRRWRRGLRPRYRRRHYRRRRRTRRLPRNRRGHRANRVYYF
FT                   RLRHSVKVTLQKDEGGSFKYGTDVFTFTLEDVLNPTGGDSLKLPFEDYKIVLVKVEMRP
FT                   LGENSTEWKGLGHTVPITDARLMNFVKKKGLADDPLANWDGALKWDQRKGFKRLVRPKP
FT                   QLVITDLSTANETAALWLNSQKAFWIPLQLNAAQIKPKKVKHYGIAFSYLQPSPDEWAY
FT                   QANITFYMKFRQFAWTALSDPPTPNVMADLPPHMELMNVIEDDEGPDSFPEFFE"
XX
SQ   Sequence 2063 BP; 548 A; 500 C; 546 G; 469 T; 0 other;
     accggccact tggagccacg gagccatcgt ctcgaaatgg ctgtaagggg ctctgccgct        60
     aagagatggt gcttcaccct caacaacccc acagaggaag agattgcagc agtcaaagcc       120
     tggcagcaca gtgagtacca ctatgccatt gtgggaaaag aaaaaggaga gcaagggacc       180
     ccccacctcc aaggctttat ccacttaaag aaaaaagtga gactcacaag ccttaaaaaa       240
     gtgctgcaaa gagctcactg ggagaaggcc cgaggcagtg atgaagataa tgagaaatac       300
     tgcagtaaag agggggacgt gatactcacg atcggcatac cagtgaaggg aaaccggagc       360
     gaccttgccg gagctgttgc cgctgtgaaa gccggaagag gaatgagtga gatcgcgcga       420
     gagttcagtg agacttacgt cagatatggg cggggcctcc gggatctagc ccttctgatt       480
     ggtcagaagc aacgtgactt caagacggaa gttaccgtgc ttactggccc ttcaggtgtg       540
     ggcaagtccc ggtgggccaa tgaacaagtt gggacaaagt tctataaaat gaaaggtgat       600
     tggtgggatg gatactgcaa tgaggatata gtaatcattg atgatttcta tgggtggata       660
     cccttctgtg agctgctgag actgtgtgat cgatacccac ataaggtgcc cgtcaagggg       720
     tcctatgtgg agttcaacag caagcagatc atcattacca gtaacacccc accggactcg       780
     tggtataatg aagacaagtg ttatgtgcaa gctctgttta gacgtataaa cagatggctt       840
     gtgtgggatg ccacccagtt cgtggatgca ccggaagtga tgaagaagta tccgatcaac       900
     tactgaccgg aaacggaaat gacgtcaccg gaaatgacga cactcgagat cttgttatta       960
     taaaaaataa aacggggggt ccggggggga gccccagccc cccgcgaagc ggggggctga      1020
     tcagggcgct ccccccccgg tgtcgtggac ctttagccgt ccacgaccgc gagggcgccg      1080
     taggcgaccg aagcgtgtcc cccgggccga aggcccgggt ctacactcga cctcgaggaa      1140
     aaaaaaataa ataaataata caccggaaac ggaaatgacg tcacttcctt tattcaaaga      1200
     attctgggaa agagtcggga ccttcatcgt cctcaatgac attcatgagt tccatgtggg      1260
     gtgggaggtc ggccattaca ttgggggttg gggggtcact cagagcagtc catgcaaact      1320
     gcctgaattt catatagaag gttatattgg cctggtaagc ccactcatct ggtgatggct      1380
     gcaggtagct gaaagctatc ccgtagtgtt tcactttttt gggtttaatc tgggcagcat      1440
     tcaactgcag ggggatccaa aatgccttct ggctgtttaa ccatagagca gccgtttcat      1500
     tagcagtaga taggtcagta atcaccagtt gaggtttagg ccttaccagc ctcttaaacc      1560
     ccttcctctg atcccatttc agggccccat cccaattagc tagggggtcg tcagccagcc      1620
     cctttttctt aacaaaattc ataagtctgg catcagtgat aggcactgta tgccctaacc      1680
     ccttccactc agtagagttc tcccctaggg gtctcatctc gacctttaca agaacaatct      1740
     tatagtcctc aaaaggtaat ttgagactat cacccccagt ggggttaagt acgtcttcaa      1800
     gagtaaaagt aaagacatca gtcccatatt taaaagagcc tccctcgtcc ttttgaagag      1860
     tgactttgac agagtgccga agtctaaagt aatagacacg gttggctctg tgccctcttc      1920
     tgttcctcgg caaccgcctg gtccgtctcc gcctcctgta gtgacgtctc cgataacggg      1980
     gtcgaagtcc gcgtctccac ctccgtctcg atagcaacat ggttaataat taaccagtgg      2040
     ctccaagtgg ccgtttcagt att                                              2063
//