ID DQ169054; SV 1; linear; genomic DNA; STD; VRL; 2751 BP. XX AC DQ169054; XX DT 14-SEP-2005 (Rel. 85, Created) DT 14-SEP-2005 (Rel. 85, Last updated, Version 1) XX DE Tomato yellow leaf curl Kanchanaburi virus segment DNA A, complete DE sequence. XX KW . XX OS Tomato yellow leaf curl Kanchanaburi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2751 RA Tsai W.S., Green S.K.; RT ; RL Submitted (16-AUG-2005) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center-The World RL Vegetable Center, PO Box 42, Shanhua, Tainan, Taiwan 741, ROC XX DR MD5; d7b65573d1d82479b31de7d54297b850. DR EuropePMC; PMC2224568; 17977971. XX FH Key Location/Qualifiers FH FT source 1..2751 FT /organism="Tomato yellow leaf curl Kanchanaburi virus" FT /segment="DNA A" FT /host="tomato" FT /strain="Kanchanaburi" FT /mol_type="genomic DNA" FT /country="Viet Nam" FT /db_xref="taxon:266799" FT gene 118..480 FT /gene="AV2" FT CDS 118..480 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /note="PreCP" FT /db_xref="GOA:Q3S3W4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q3S3W4" FT /protein_id="ABA00488.1" FT /translation="MENMWDPLLHPFPESLHGFRCMLAIKYLQNLQSKYSPDTLGSEFL FT KDFICILRSRNYAEAFNRYSDVVANVYNTPEAKLRESVQSPCLCPHCPRHVLQAKSLEK FT PSYVHEASVLSVAKEQ" FT gene 287..1063 FT /gene="AV1" FT CDS 287..1063 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q3S3W3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q3S3W3" FT /protein_id="ABA00485.1" FT /translation="MPKRSIDTVTSLPMSITRRRLNFGSQYSLPASAPTAPGMSYKRRA FT WKNRPMYTKPRFYRWRRSSDVPRGCEGPCKVQSFEQRHDITHTGKVLCVSDVTRGNGIT FT HRIGKRFCVKSVYVMGKIWMDENIKLKNHTNTVMFWLVRDRRPVTTPYGFGELFNMYDN FT EPSTATVKNDLRDRVQVLHRFSASLTGGQYASKEQAVIKKFFRVNNYVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN" FT gene complement(1060..1464) FT /gene="AC3" FT CDS complement(1060..1464) FT /codon_start=1 FT /gene="AC3" FT /product="C3 protein" FT /db_xref="GOA:Q3S3W2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q3S3W2" FT /protein_id="ABA00487.1" FT /translation="MDLRTGETITAAQAQNGVYIWEVPNPLYFKVLKHNSRPFNDNNDY FT LEIQIQFNHNLRKALGIHKCFLIFRIWTPLQPQTWHFLRVFKNQCMIYLNNLGVISINN FT VIRAADYVLWDVLDNTNYVDHCHIIKFNIY" FT gene complement(1205..1612) FT /gene="AC2" FT CDS complement(1205..1612) FT /codon_start=1 FT /gene="AC2" FT /product="C2 protein" FT /db_xref="GOA:Q3S3W1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q3S3W1" FT /protein_id="ABA00486.1" FT /translation="MQNSSPSNSHSSIVPIKVQHKIAKKKITRRRRVDLDCGCSYYVSI FT NCHKYGFTHRGNHYCSSSAEWRLYMGGSKSPVFQGAEAQQQTLQRQQRLFGDTDPIQPQ FT PQEGVGDSQVFPDLPDLDSFTTSDMAFLKSV" FT gene complement(1551..2600) FT /gene="AC1" FT CDS complement(1551..2600) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="Rep" FT /db_xref="GOA:Q3S3W0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q3S3W0" FT /protein_id="ABA00484.1" FT /translation="MPSPNRFKINAKNYFLTYPQCSLNKEETLSQLKDLKTPTSKKYIK FT ICRELHEDGSPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYL FT EKDGDTIEWGEFQIDGRSARGGQQSANDAYAKAINCGSKSEALAVVKELAPKDYVLQYH FT NLNANLDKIFAPIKELYANPYELSSFNQVPEELASWAEKNVCDAAARPWRPIGMVIEGE FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPSSSFKEFLDEPKNEALKNWALKNAEFITLEQPL FT FNCTHQSAT" FT gene complement(2141..2443) FT /gene="AC4" FT CDS complement(2141..2443) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q3S3V9" FT /protein_id="ABA00489.1" FT /translation="MGALISMCSYSSKGNSSAKITDSSTWFPQPDQHISIQMFRELNQA FT PTSSPIWRRTEIQLNGGNSRLMEDLLEADNNPPMTHTQRQLTAEVSRRLLQSLRN" XX SQ Sequence 2751 BP; 743 A; 549 C; 587 G; 872 T; 0 other; accgagggcc gcggggtttt ggagtctggc cccacatgta tttttgacca atcagctttc 60 agcttgaaag ctatttaagt gcgtaccgca ctacaaaagc agtcccattt acagctaatg 120 gaaaacatgt gggatccatt gctacatcct tttccagaga gtttgcacgg ctttagatgt 180 atgcttgcaa tcaagtatct ccaaaactta cagagtaagt attctcctga tactcttggg 240 agtgaattct tgaaggattt catctgcata ttgcggagta gaaattatgc cgaagcgttc 300 aatagataca gtgacgtcgt tgccaatgtc tataacacgc cggaggctaa acttcgggag 360 tcagtacagt ctccctgcct ctgcccccac tgccccaggc atgtcttaca agcgaagagc 420 ttggaaaaac cgtcctatgt acacgaagcc tcggttttat cggtggcgaa ggagcagtga 480 tgttccacgg ggatgtgagg gtccttgtaa ggttcagtcc tttgagcaga gacatgatat 540 aacacacact ggcaaggtgt tgtgtgtgtc tgatgttact agaggcaacg gtattactca 600 tagaataggt aagagatttt gcgtcaagtc tgtttatgtt atgggcaaaa tctggatgga 660 tgagaatatt aaattgaaga atcacaccaa tactgttatg ttttggcttg ttcgtgacag 720 aagacctgtt acaaccccat atggtttcgg agagttattc aacatgtatg acaacgagcc 780 cagtactgca acagtaaaga acgatctcag agatcgtgtg caagtgcttc atcgtttctc 840 agcatcatta accggtggtc aatatgccag caaggaacaa gcagttatta aaaaattttt 900 tagagttaat aattatgttg tctataatca ccaagaagct gctaagtatg aaaatcacac 960 tgagaatgct ttgttattgt atatggcatg tactcatgcc tctaatcctg tgtatgcaac 1020 tcttaagatt agaatctact tttatgataa tgtcaccaat taataaatat tgaattttat 1080 tatatgacaa tggtctacat aatttgtatt gtccaataca tcccatagta cataatcagc 1140 tgcgcgtatt acattgttaa ttgaaattac acctaaatta ttcaaatata tcatacattg 1200 attcttaaac actcttaaga aatgccatgt ctgaggttgt aaaggagtcc aaatccggaa 1260 gatcaggaaa cacttgtgaa tccccaacgc cttcctgagg ttgtggttga attggatctg 1320 tatctccaaa tagtcgttgt tgtcgttgaa gggtctgctg ttgtgcttca gcaccttgaa 1380 atacagggga tttggaacct cccatatata gacgccattc tgcgcttgag ctgcagtaat 1440 ggtttcccct gtgcgtaaat ccatacttat gacaattaat gcttacgtaa tacgaacagc 1500 cacagtctaa gtctaccctc cgtcttcttg ttattttctt ttttgcaatt ttatgttgca 1560 ctttgatggg tacaattgaa gagtggctgt tcgagggtga tgaattctgc attttttaat 1620 gcccaatttt ttaatgcctc attttttggt tcatccaaaa actctttaaa ggaagatgat 1680 ggaccaggat tgcagaggaa gatagtggga attccacctt taatttgaat gggtttcccg 1740 tactttgtgt tgctttgcca gtccctttgg gcccccataa attctttaaa gtgctttaga 1800 taatgcggat ctacgtcatc aatgacgtta taccaagcat cattactgta cacttttggg 1860 ctaaggtcta gatgaccaca caaataattg tgagggccca atgatctggc ccacattgtt 1920 ttgccggttc tagattcacc ttcaattacc attcctatgg gtctccacgg ccgcgcagcg 1980 gcatcacaca catttttctc agcccaggag gcaagttctt ctggaacttg attgaaagac 2040 gacaactcgt aaggattagc atataattct ttgattgggg caaatatctt gtccagatta 2100 gcattcaaat tgtggtactg cagtacatag tcttttgggg ctaattcctt aacgactgca 2160 agagcctccg acttacttcc gcagttaatt gcctttgcgt atgcgtcatt ggcggattgt 2220 tgtccgcctc gagcagatct tccatcaatc tggaattccc cccattcaat tgtatctccg 2280 tccttctcca gataggactt gacgtcggag cttgatttag ctccctgaac atttggatgg 2340 aaatgtgctg atctggttgg ggaaaccagg tcgaagaatc tgttattttt gcactggaat 2400 ttcccttcga actgtatgag cacatggaga tgagggctcc catcctcgtg aagttctctg 2460 cagattttga tatatttctt tgaagttggg gttttgagat ctttcaactg agagagggtt 2520 tcttctttgt tcagagagca ctgaggatat gtgagaaaat aatttttggc atttatttta 2580 aacctatttg gagaaggcat gctgagctgt cctattggag tctctccatt taacacatat 2640 attggtgtat aggagtccta tatataggta agaccctaaa tggcaaattt gtaattctgg 2700 agacaccaat tgctttattt tgaatttgca aagcggccct cgtataatat t 2751 //