ID   DQ143875; SV 1; linear; genomic RNA; STD; VRL; 1794 BP.
XX
AC   DQ143875;
XX
DT   23-AUG-2005 (Rel. 84, Created)
DT   26-MAY-2006 (Rel. 87, Last updated, Version 3)
XX
DE   Stocky prune virus segment RNA-2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Stocky prune virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Cheravirus.
XX
RN   [1]
RP   1-1794
RX   DOI; 10.1007/s00705-005-0682-y.
RX   PUBMED; 16380812.
RA   Candresse T., Svanella-Dumas L., Le Gall O.;
RT   "Characterization and partial genome sequence of stocky prune virus, a new
RT   member of the genus Cheravirus";
RL   Arch. Virol. 151(6):1179-1188(2006).
XX
RN   [2]
RP   1-1794
RA   Candresse T., Svanella-Dumas L., Le Gall O.;
RT   ;
RL   Submitted (25-JUL-2005) to the INSDC.
RL   GDPP, INRA-Bordeaux, IBVM, BP 81, Villenave d'Ornon Cedex F-33883, France
XX
DR   MD5; d49a2e675246d23374994b26fe7e22f5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1794
FT                   /organism="Stocky prune virus"
FT                   /segment="RNA-2"
FT                   /isolate="Brugeres"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /db_xref="taxon:340196"
FT   CDS             <1..1539
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q3YC00"
FT                   /protein_id="AAZ76595.1"
FT                   /translation="DKNSSFKHTVSLSILQHLPGLVLDGTHETEAELEMEPLPLGVLSS
FT                   LTGKNHFLGQLLVGSLINMKAGSVGDVTIKVRFYFKEVEQWYNSATGSASFSSLGFGAF
FT                   LPQNCYIGDPMLNVVVKIDSSVGSQWRVPVLPNRGIIGDKVWYPNCSSSLFESHRAWKG
FT                   KCLFRYYFSVPPLASGTFLILALPPGELEKTKVDLDYVLSSDSGVKPFSVVEVDLSLDR
FT                   HGYILVDFADWRGFFTAGASSISYTENEGCPWLCVLQTSHLTCLNKEFSDFNIYLEFVE
FT                   MVDCKFFGPTWVPPVRMALEDYSSKAFGSTISPSANWLYSGWLTKWTATKYSWICFPVS
FT                   PSVDLLPITTIKDHTFGNGSNNLLKMRAGESCLWRGTISYLIRSNSFVSLMGAYSATCH
FT                   SSFVNGFLPESKVANFAQGGSTIFFNEKSTQLSLEFTIPMAETYTHFKTGSATETWGRD
FT                   LCYNGWVFIKLPPWVDGQTLQFFIKPHLDFEFMGQNPPPLVTTTLDPTPSIVYT"
XX
SQ   Sequence 1794 BP; 415 A; 349 C; 390 G; 640 T; 0 other;
     gataagaact cttcttttaa gcatacggtc tccctctcaa ttttacagca tcttccagga        60
     cttgtcctgg atggtacaca tgagactgag gcagagcttg agatggaacc tcttccttta       120
     ggggttttaa gttctttgac tggcaagaat cattttttag gtcagcttct tgtaggtagt       180
     ttaataaata tgaaagctgg tagtgttggt gatgttacta tcaaagttcg cttctacttt       240
     aaggaagttg aacaatggta taatagtgcc actggctctg ctagtttttc tagccttggt       300
     tttggggctt tcttacccca gaactgttac attggtgacc caatgctcaa tgttgtcgtt       360
     aaaatcgatt cgagtgttgg gtcccagtgg agagttcctg ttctacccaa taggggtata       420
     ataggagaca aggtttggta tcctaattgt agttcctccc tttttgagtc gcatagggct       480
     tggaaaggga agtgtctttt taggtattat ttttcagtac cgccattagc tagtggtact       540
     ttccttatct tggctcttcc tcctggtgag ctagagaaaa ctaaagtcga tcttgactat       600
     gttctctcta gtgattcggg tgtaaagcct ttttccgtag ttgaagtaga tctctctctt       660
     gatcggcatg ggtacatact tgttgatttt gccgattgga ggggtttctt tacagctggg       720
     gcttcttcca tttcctatac agaaaatgag ggatgcccat ggctttgtgt tttacagacg       780
     agtcatttga cttgtctgaa taaagaattt tctgatttta atatttattt agaattcgtt       840
     gaaatggtgg actgtaaatt ttttggccca acttgggtcc caccagttag gatggctctc       900
     gaagattatt ccagcaaagc ttttggtagc actatttcac caagtgccaa ttggttgtac       960
     tccggttggc tgacgaagtg gactgctacc aagtatagct ggatttgttt tcctgtttca      1020
     ccatcggtag atttgttgcc cattaccact attaaagacc acacctttgg taatggctct      1080
     aacaatctgc tgaagatgcg agcaggagag agctgtcttt ggagaggaac tatttcttac      1140
     cttattagga gtaattcctt tgtttcactc atgggtgctt attcggctac ttgtcatagt      1200
     agttttgtga atggttttct tccagaaagc aaagttgcta actttgctca aggtggctct      1260
     accatatttt tcaatgagaa aagcacccaa ctatcccttg aatttacaat tccaatggct      1320
     gagacttaca ctcatttcaa aactgggtcg gccacagaaa cttggggtag ggatttgtgt      1380
     tacaatggat gggtctttat caagttgcca ccttgggttg atggtcagac tcttcaattt      1440
     tttatcaagc ctcatcttga ttttgaattt atgggtcaaa atcctcctcc cctagttaca      1500
     actacattag atccaactcc tagtatagtg tatacctagt cttcctcttc tcctttcgtc      1560
     aggttattgt aacttggcaa ggttttcccc agccttcctg tttgtttggg gttaggattt      1620
     cttctcttgt ttagagttct tcttcgtcac ctgagtggct ggatagcctg tggcaagttc      1680
     ctctttcctg agattttatc tctttctttt atcgtattag aagtgcaata tagcactgcg      1740
     tctccgtttc tgcagtagtg ttatagtgtc ttttcctagt cgggaaaaaa aaaa            1794
//