ID   DQ120126; SV 1; linear; genomic RNA; STD; VRL; 2164 BP.
XX
AC   DQ120126;
XX
DT   06-SEP-2005 (Rel. 85, Created)
DT   06-SEP-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Raspberry bushy dwarf virus segment RNA-2, complete sequence.
XX
KW   .
XX
OS   Raspberry bushy dwarf virus
OC   Viruses; Riboviria; Idaeovirus.
XX
RN   [1]
RP   1-2164
RX   AGRICOLA; IND44784712.
RA   Chamberlain C.J., Kraus J.E., Kohnen P.D., Finn C.E., Martin R.R.;
RT   "First Report of Raspberry bushy dwarf virus in Rubus multibracteatus from
RT   China";
RL   Plant Dis. 87(5):603-603(2003).
XX
RN   [2]
RP   1-2164
RA   Kraus J.E., Chamberlain C.J., Kohnen P.D., Finn C.E., Martin R.R.;
RT   ;
RL   Submitted (08-JUL-2005) to the INSDC.
RL   Horticultural Crops Research Laboratory, United States Department of
RL   Agriculture/Agricultural Research Service, 3420 NW Orchard Ave., Corvallis,
RL   OR 97330, USA
XX
DR   MD5; a2ba766b39aea9ab68e833727249b7c7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2164
FT                   /organism="Raspberry bushy dwarf virus"
FT                   /segment="RNA-2"
FT                   /host="Rubus multibracteatus"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12451"
FT   CDS             95..1171
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q3SA52"
FT                   /protein_id="AAZ76536.1"
FT                   /translation="MFNRGSSTRRSLVGSRGGSIFGGGSSTKSSTVRGFSAGLERSRGL
FT                   PPAGDGGNQVSLPGLRIPVKASSQPGNYYLKERGIDLPIVQQQKFLAADGKEMGECYLL
FT                   DTSRTDLLDAAKAALNESKLLEFNKFKEFKKYKGKNNEFPIVEASIYEKLVRKDETPVH
FT                   LNRLLIAVVPAVGKGTPGSTRIKVRDARLEDGYGELFSSENRVDAGYIYCINVGYSVPK
FT                   SEIDYKINIDFIGVPIKDGKSPIWVKAAFCLAGGSPVFLDGTMSLGAEILPDSHKEMLG
FT                   TSALLLNEANSNRKSFSGDDGELKREYPYRRFEEISPLDSISQVDTASQDSTNEVNTEN
FT                   AQNSAGEVYLAPPSHSVY"
FT   CDS             1285..2109
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q3SA51"
FT                   /db_xref="InterPro:IPR009516"
FT                   /db_xref="UniProtKB/TrEMBL:Q3SA51"
FT                   /protein_id="AAZ76537.1"
FT                   /translation="MSKKTVPPIVKAQYELYNRKLNRALKVSGNKKRLDASFVGFCESS
FT                   NPETGKPHADMSMAAKVKRVNTWLKNFDREYWDNQFASKPLPRPAKQVLRGSSSSSQQC
FT                   DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLNYKDGENVVEVVFSDLTAQRAGDKLV
FT                   SLLLEINVVGGAVADKGRVAVLEKDASVTVDYLLGSPYETINLVSGLNKINLRSMTDVV
FT                   DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT"
XX
SQ   Sequence 2164 BP; 570 A; 438 C; 532 G; 624 T; 0 other;
     gagtttgctc tttggtggtc attgagtggc gaacttactg tcttgttctc tcggtttaag        60
     aaacgtaaaa tatatccttg gtgattgtat catcatgttt aacagaggtt cctctactcg       120
     ccgctccctt gttgggagca ggggtggctc catttttggg gggggttctt ctacgaagtc       180
     tagtactgtg agggggttct ctgctggtct tgaaagatca cgaggattac ctcccgccgg       240
     tgatggtgga aaccaggtct cactgccggg gctcaggatc ccagttaagg cttcttcaca       300
     gccgggaaat tattacctta aagagagggg tattgattta ccgattgtgc aacagcagaa       360
     atttctggcc gctgacggca aagaaatggg ggagtgttac cttttggaca cttctcgaac       420
     tgatctgttg gatgctgcta aagctgcatt aaatgaatcc aagctccttg agtttaataa       480
     attcaaggaa ttcaagaagt ataaggggaa gaataatgag ttccccatcg tagaggcatc       540
     aatttatgaa aaattggtga ggaaggacga gactcctgta cacctcaaca gacttttaat       600
     agctgttgtc cctgccgtag gtaagggaac tccaggatcc acgcgaatta aagttcgcga       660
     tgcgcgtctg gaagatggtt acggagaact ctttagttct gagaatcgag tagatgctgg       720
     gtacatttat tgtataaatg ttggttattc cgtcccaaaa tctgaaatcg attacaaaat       780
     caatattgat tttatcgggg ttcccatcaa agatggtaaa tctccgatct gggtaaaggc       840
     cgccttttgt ttggctggtg gtagcccagt gttccttgat ggaacaatga gcctaggtgc       900
     tgaaattcta cccgactcgc ataaagagat gttgggtacc tctgctttgt tgttgaacga       960
     agcgaattcc aataggaagt cgttttcggg cgatgatggg gagctgaaaa gggaatatcc      1020
     ctataggcga tttgaggaaa tttcacctct ggattctatt agtcaagtcg atacggctag      1080
     tcaggattcc actaatgagg tgaacactga gaatgctcaa aacagtgctg gtgaggtgta      1140
     tttggcacct ccttcgcact ctgtatatta ataacttagt tattaacgca ttgaatgcgt      1200
     acgacactta gtgtcgatcg cagttgaaac tttcccaact gcattatatt tcttgtgaat      1260
     tgatactaag tattcaagtt ttccatgtcg aagaaaactg ttccgcctat cgttaaggct      1320
     caatacgagc tgtataatcg taagctgaac agggcactca aagtgtctgg caacaaaaag      1380
     aggctagatg cttcttttgt cggattctgc gaaagctcta acccagagac tgggaaaccc      1440
     catgcggaca tgtcgatggc cgctaaggtt aagcgcgtga atacgtggct taaaaatttt      1500
     gatcgcgaat attgggataa ccagttcgct tcaaaacctc ttcccaggcc tgctaagcag      1560
     gtcttaagag gttcatcctc ctcctctcag caatgtgatg aaggagaggt ggtctttacc      1620
     agaaaagact cccagaaatc cgttaggact gtgtcttatt gggtctgcac tcctgagaag      1680
     tctatgaaac ctctcaacta taaggatggc gaaaacgttg ttgaagtcgt cttcagcgac      1740
     ctcaccgctc aaagagctgg tgataaattg gtctccctcc tgttggagat caatgtggta      1800
     ggcggagccg tggccgataa aggtcgtgtg gctgtcctgg aaaaggatgc ctccgttacg      1860
     gtcgattacc ttcttggtag tccttacgaa accataaatc ttgtttctgg tttaaacaag      1920
     ataaatctta ggtccatgac cgatgtggta gactccattc catcgctctt aaatgagcgt      1980
     aaggtgtgcg tcttccaaaa tgatgatagt tcatcgtttt acatccggaa atgggccaac      2040
     ttccttcagg aagtttcggc agttttacca gtaggaactg gtaaatcttc cacaatagtt      2100
     ctaacttagt tagatctatg tgcctgctag tgggcatatc tcacaatttt gtgagataaa      2160
     cggc                                                                   2164
//