Dbfetch
ID DQ120126; SV 1; linear; genomic RNA; STD; VRL; 2164 BP. XX AC DQ120126; XX DT 06-SEP-2005 (Rel. 85, Created) DT 06-SEP-2005 (Rel. 85, Last updated, Version 1) XX DE Raspberry bushy dwarf virus segment RNA-2, complete sequence. XX KW . XX OS Raspberry bushy dwarf virus OC Viruses; Riboviria; Idaeovirus. XX RN [1] RP 1-2164 RX AGRICOLA; IND44784712. RA Chamberlain C.J., Kraus J.E., Kohnen P.D., Finn C.E., Martin R.R.; RT "First Report of Raspberry bushy dwarf virus in Rubus multibracteatus from RT China"; RL Plant Dis. 87(5):603-603(2003). XX RN [2] RP 1-2164 RA Kraus J.E., Chamberlain C.J., Kohnen P.D., Finn C.E., Martin R.R.; RT ; RL Submitted (08-JUL-2005) to the INSDC. RL Horticultural Crops Research Laboratory, United States Department of RL Agriculture/Agricultural Research Service, 3420 NW Orchard Ave., Corvallis, RL OR 97330, USA XX DR MD5; a2ba766b39aea9ab68e833727249b7c7. XX FH Key Location/Qualifiers FH FT source 1..2164 FT /organism="Raspberry bushy dwarf virus" FT /segment="RNA-2" FT /host="Rubus multibracteatus" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12451" FT CDS 95..1171 FT /codon_start=1 FT /product="movement protein" FT /db_xref="UniProtKB/TrEMBL:Q3SA52" FT /protein_id="AAZ76536.1" FT /translation="MFNRGSSTRRSLVGSRGGSIFGGGSSTKSSTVRGFSAGLERSRGL FT PPAGDGGNQVSLPGLRIPVKASSQPGNYYLKERGIDLPIVQQQKFLAADGKEMGECYLL FT DTSRTDLLDAAKAALNESKLLEFNKFKEFKKYKGKNNEFPIVEASIYEKLVRKDETPVH FT LNRLLIAVVPAVGKGTPGSTRIKVRDARLEDGYGELFSSENRVDAGYIYCINVGYSVPK FT SEIDYKINIDFIGVPIKDGKSPIWVKAAFCLAGGSPVFLDGTMSLGAEILPDSHKEMLG FT TSALLLNEANSNRKSFSGDDGELKREYPYRRFEEISPLDSISQVDTASQDSTNEVNTEN FT AQNSAGEVYLAPPSHSVY" FT CDS 1285..2109 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q3SA51" FT /db_xref="InterPro:IPR009516" FT /db_xref="UniProtKB/TrEMBL:Q3SA51" FT /protein_id="AAZ76537.1" FT /translation="MSKKTVPPIVKAQYELYNRKLNRALKVSGNKKRLDASFVGFCESS FT NPETGKPHADMSMAAKVKRVNTWLKNFDREYWDNQFASKPLPRPAKQVLRGSSSSSQQC FT DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLNYKDGENVVEVVFSDLTAQRAGDKLV FT SLLLEINVVGGAVADKGRVAVLEKDASVTVDYLLGSPYETINLVSGLNKINLRSMTDVV FT DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT" XX SQ Sequence 2164 BP; 570 A; 438 C; 532 G; 624 T; 0 other; gagtttgctc tttggtggtc attgagtggc gaacttactg tcttgttctc tcggtttaag 60 aaacgtaaaa tatatccttg gtgattgtat catcatgttt aacagaggtt cctctactcg 120 ccgctccctt gttgggagca ggggtggctc catttttggg gggggttctt ctacgaagtc 180 tagtactgtg agggggttct ctgctggtct tgaaagatca cgaggattac ctcccgccgg 240 tgatggtgga aaccaggtct cactgccggg gctcaggatc ccagttaagg cttcttcaca 300 gccgggaaat tattacctta aagagagggg tattgattta ccgattgtgc aacagcagaa 360 atttctggcc gctgacggca aagaaatggg ggagtgttac cttttggaca cttctcgaac 420 tgatctgttg gatgctgcta aagctgcatt aaatgaatcc aagctccttg agtttaataa 480 attcaaggaa ttcaagaagt ataaggggaa gaataatgag ttccccatcg tagaggcatc 540 aatttatgaa aaattggtga ggaaggacga gactcctgta cacctcaaca gacttttaat 600 agctgttgtc cctgccgtag gtaagggaac tccaggatcc acgcgaatta aagttcgcga 660 tgcgcgtctg gaagatggtt acggagaact ctttagttct gagaatcgag tagatgctgg 720 gtacatttat tgtataaatg ttggttattc cgtcccaaaa tctgaaatcg attacaaaat 780 caatattgat tttatcgggg ttcccatcaa agatggtaaa tctccgatct gggtaaaggc 840 cgccttttgt ttggctggtg gtagcccagt gttccttgat ggaacaatga gcctaggtgc 900 tgaaattcta cccgactcgc ataaagagat gttgggtacc tctgctttgt tgttgaacga 960 agcgaattcc aataggaagt cgttttcggg cgatgatggg gagctgaaaa gggaatatcc 1020 ctataggcga tttgaggaaa tttcacctct ggattctatt agtcaagtcg atacggctag 1080 tcaggattcc actaatgagg tgaacactga gaatgctcaa aacagtgctg gtgaggtgta 1140 tttggcacct ccttcgcact ctgtatatta ataacttagt tattaacgca ttgaatgcgt 1200 acgacactta gtgtcgatcg cagttgaaac tttcccaact gcattatatt tcttgtgaat 1260 tgatactaag tattcaagtt ttccatgtcg aagaaaactg ttccgcctat cgttaaggct 1320 caatacgagc tgtataatcg taagctgaac agggcactca aagtgtctgg caacaaaaag 1380 aggctagatg cttcttttgt cggattctgc gaaagctcta acccagagac tgggaaaccc 1440 catgcggaca tgtcgatggc cgctaaggtt aagcgcgtga atacgtggct taaaaatttt 1500 gatcgcgaat attgggataa ccagttcgct tcaaaacctc ttcccaggcc tgctaagcag 1560 gtcttaagag gttcatcctc ctcctctcag caatgtgatg aaggagaggt ggtctttacc 1620 agaaaagact cccagaaatc cgttaggact gtgtcttatt gggtctgcac tcctgagaag 1680 tctatgaaac ctctcaacta taaggatggc gaaaacgttg ttgaagtcgt cttcagcgac 1740 ctcaccgctc aaagagctgg tgataaattg gtctccctcc tgttggagat caatgtggta 1800 ggcggagccg tggccgataa aggtcgtgtg gctgtcctgg aaaaggatgc ctccgttacg 1860 gtcgattacc ttcttggtag tccttacgaa accataaatc ttgtttctgg tttaaacaag 1920 ataaatctta ggtccatgac cgatgtggta gactccattc catcgctctt aaatgagcgt 1980 aaggtgtgcg tcttccaaaa tgatgatagt tcatcgtttt acatccggaa atgggccaac 2040 ttccttcagg aagtttcggc agttttacca gtaggaactg gtaaatcttc cacaatagtt 2100 ctaacttagt tagatctatg tgcctgctag tgggcatatc tcacaatttt gtgagataaa 2160 cggc 2164 //