ID   DQ119824; SV 1; circular; genomic DNA; STD; VRL; 2645 BP.
XX
AC   DQ119824;
XX
DT   31-JUL-2005 (Rel. 84, Created)
DT   31-JUL-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Bean Golden Yellow Mosaic Virus [HomesteadFL] DNA A, complete sequence.
XX
KW   .
XX
OS   Bean golden yellow mosaic virus [HomesteadFL]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2645
RX   AGRICOLA; IND20469222.
RA   Blair M.W., Bassett M.J., Abouzid A.M., Hiebert E., Polston J.E.,
RA   McMillan R.T.Jr., Graves W., Lamberts M.;
RT   "Occurrence of bean golden mosaic virus in Florida";
RL   Plant Dis. 79(5):529-533(1995).
XX
RN   [2]
RP   1-2645
RA   Hiebert E., Abouzid A.M., Polston J.E.;
RT   ;
RL   Submitted (08-JUL-2005) to the INSDC.
RL   Plant Pathology, University of Florida, 1453 Fifield Hall, Gainesville, FL
RL   32611 0680, USA
XX
DR   MD5; 2e4a19ab5f377ca17e54e1332c2125e1.
DR   EuropePMC; PMC4802622; 27000806.
DR   EuropePMC; PMC5408669; 28358318.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2645
FT                   /organism="Bean golden yellow mosaic virus [HomesteadFL]"
FT                   /segment="DNA A"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:South Florida"
FT                   /isolation_source="field beans"
FT                   /db_xref="taxon:337896"
FT   rep_origin      join(2498..2645,1..37)
FT                   /note="common region of bipartite begomovirus; Rep protein
FT                   binding region"
FT   gene            198..953
FT                   /gene="AV1"
FT   CDS             198..953
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q45QU6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q45QU6"
FT                   /protein_id="AAZ29483.1"
FT                   /translation="MPKRDAPWRQMAGTYKVSRSGNYSPGSGMGSKSNKANAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHAENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   gene            complement(950..1348)
FT                   /gene="AC3"
FT   CDS             complement(950..1348)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="Ren"
FT                   /note="replication enhancement protein"
FT                   /db_xref="GOA:Q45QU5"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q45QU5"
FT                   /protein_id="AAZ29486.1"
FT                   /translation="MDSRTGENITVHQAENSVFIWEVPNPLYFRIMRVEDPAYTRTRIY
FT                   HIQVRFNHNLRKALDLHKAFLNFQVWTTSIQASGTTYLNRFRHLVLLYLHRLGVIGINN
FT                   VIRAVQFATDKSYVNTVLENHEIKYKFY"
FT   gene            complement(1095..1613)
FT                   /gene="AC2"
FT   CDS             complement(1095..1613)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="Trap"
FT                   /note="transactivator for AV1 and BV1"
FT                   /db_xref="GOA:Q45QU4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q45QU4"
FT                   /protein_id="AAZ29485.1"
FT                   /translation="MESRFKLKEEYHQSCCAIQVRVPVIKTSSTKKKTELYTTGPFIMR
FT                   SSSPSQPPSIKAQHRIAKRRAIRRRRIDLNCGCSIFYHIKCADHGFTHRGEHHCASGRE
FT                   FRFYLGGTKSPLFQDHASGRSSIHTNKDIPHPSQVQSQPQESTGSPQSIPELPSLDDID
FT                   SSFWDDIFK"
FT   gene            complement(1420..2481)
FT                   /gene="AC1"
FT   CDS             complement(1420..2481)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="Rep protein"
FT                   /note="replication associated protein"
FT                   /db_xref="GOA:Q45QU3"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q45QU3"
FT                   /protein_id="AAZ29484.1"
FT                   /translation="MPQPQRFRVQSKNYFLTYPRCSIPKEEALSQLQKIHTATNKKFIK
FT                   VCEERHENGEPHLHALIQFEGKFVCTNERLFDLVSSTRSTHFHPNIQGAKSSSDVKAYI
FT                   DKDGVTIEWGQFQVDGRSARGGQQSANDSYAKALNAESIESALTILKEEQPKDYVLHNH
FT                   NIRSNLERIFVKEPEPWVPPFPLSSFINVPVVMEEWVDNYFGRGSAARPERPISIIIEG
FT                   DSRTGKTMWARSLGPHNYLSGHLDFNSRVYSNAVEYNVIDDISPNYLKLKHWKELIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKEENRALHNWTIHNAIFVTLT
FT                   TPLYQSTAQDCQT"
XX
SQ   Sequence 2645 BP; 709 A; 521 C; 590 G; 825 T; 0 other;
     accggatggc cgcccgcgcc cctttatttc cgtacgcttt cacgtgccgc tttaatttaa        60
     atttcacatg tatttctttg actgaccaat gatattgcgt ttgacgagcc tagatattcg       120
     taaaacttgg cgactaagtt ttacctttgc ttataaattt aaattaaatt gatgcccatt       180
     ccacgtgtaa gtccagaatg cctaagcgtg atgcgccatg gcgtcaaatg gcgggaacct       240
     acaaggtttc ccgttctggc aattattcac caggaagtgg aatgggctca aaatccaaca       300
     aggccaatgc atgggtcaac aggcccatgt ataggaagcc caggatatat cggatgtaca       360
     gaagcccaga tgtgcccaag ggatgtgaag gaccttgtaa ggtccaatct tatgaacaac       420
     gacatgatat ttctcatgtt ggtaaggtga tgtgtatatc cgatattact cgtggtaatg       480
     gtattaccca tcgtgtgggt aaacgttttt gtgttaagtc tgtgtatatt ttagggaaaa       540
     tatggatgga tgaaaacatc aagctcaaga atcatacgaa cagtgtgata ttttggttgg       600
     ttcgtgatcg tagaccatac ggtacgccta tggattttgg acaagtgttt aatatgtttg       660
     acaatgaacc tagcactgcg acggtaaaga atgatcttcg tgatcgttat caagttatgc       720
     atcgattcaa tgcaaaggtg actggtggtc aatatgcaag caacgagcaa gccttggtaa       780
     ggcgattttg gaaggtgaac aaccatgtcg tctataacca ccaggaagca ggaaaatacg       840
     aaaatcatgc ggaaaatgcg ttattgttgt atatggcatg tacacatgca tctaatcctg       900
     tgtatgcgac attgaaaatt cggatctatt tctatgattc gataaccaat taataaaatt       960
     tatattttat ttcatgattc tcaagtacag tatttacata tgatttgtct gttgcgaact      1020
     gaacagctcg aatgacattg tttattccta ttacgcctaa cctatgtaaa tacaataaaa      1080
     ccaaatgtct aaatctattt aaatatgtcg tcccagaagc ttgaatcgat gtcgtccaga      1140
     cttggaagtt caggaatgct ttgtggagat ccagtgcttt cctgaggttg tgattgaacc      1200
     tgacttggat gtggtatatc cttgttcgtg tgtatgctgg atcttccact cgcatgatcc      1260
     tgaaataaag gggatttggt acctcccaaa taaaaacgga attctctgcc tgatgcacag      1320
     tgatgttctc ccctgtgcgt gaatccatga tctgcgcact tgatatggta aaatatggaa      1380
     cagccgcagt tcaagtcaat gcgtcgtcga cggatggctc tacgtttggc aatcctgtgc      1440
     tgtgctttga tagagggggg ttgtgagggt gacgaagatc gcattatgaa tggtccagtt      1500
     gtgtaaagct cggttttctt ctttgtcgag gaagtcttta taactggaac cctcacctgg      1560
     attgcacagc acgattgatg gtattcctcc tttaatttga accggctttc catatttaca      1620
     gtttgattgc caatcctttt gtgccccaat tagttctttc cagtgcttta acttcaaata      1680
     attggggctt atgtcatcaa tgacgttgta ttccactgcg ttggaataga cacgtgaatt      1740
     aaagtccaaa tgaccgctca aataattatg tggtcctaat gaacgagccc acattgtttt      1800
     tcctgttcgc gaatcacctt cgatgatgat actaataggt ctctccggcc gcgcagcgga      1860
     accccttccg aaatagttgt caacccattc ttccataaca accggaacat tgatgaatga      1920
     tgacaacgga aatggaggaa cccatggttc cggctctttg acgaagatcc gttcaagatt      1980
     agaacggatg ttgtgattat gaaggacgta atctttcggt tgttcttctt ttaatatcgt      2040
     caaggcagat tcaattgatt ctgcgttcaa tgcctttgca tatgagtcgt tggcagactg      2100
     ctgacctcct cttgcagatc tgccgtcgac ttggaattgt ccccattcga ttgtgactcc      2160
     atctttgtcg atgtatgcct tgacgtctga acttgattta gctccctgaa tgttcggatg      2220
     gaaatgtgtt gacctggttg aggataccag gtcgaacaat ctttcatttg tgcagacgaa      2280
     tttaccttcg aattgaataa gcgcatgaag atggggttca ccattctcgt gacgttcctc      2340
     gcagactttg atgaattttt tattcgtggc tgtatgaatc ttctgaagtt gcgaaagagc      2400
     ttcttctttc ggtatagagc aacgaggata agtgaggaaa tagtttttgg actgaactct      2460
     aaatctttga ggttgtggca tatttgtaaa tatgcgagtg tctccaattg agtttgggag      2520
     tgtctccaat tgaggctcct caaacttacg ctatgcaatt ggagactgga gtacaatata      2580
     tactagaacc ctcaatctct taatttatca gattcacaca cgtggcggcc atccgatata      2640
     atatt                                                                  2645
//