ID DQ117579; SV 1; linear; genomic RNA; STD; VRL; 7988 BP. XX AC DQ117579; XX DT 14-APR-2006 (Rel. 87, Created) DT 07-DEC-2006 (Rel. 90, Last updated, Version 2) XX DE Peach mosaic virus strain 2022-01 (CA-1) putative polyprotein, putative DE virus movement protein, putative coat protein, and putative nucleic DE acid-binding protein genes, complete cds. XX KW . XX OS Peach mosaic virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-7988 RX DOI; 10.1094/PHYTO-96-0137. RX PUBMED; 18943916. RA James D., Varga A., Croft H., Rast H., Thompson D., Hayes S.; RT "Molecular Characterization, Phylogenetic Relationships, and Specific RT Detection of Peach mosaic virus"; RL Phytopathology 96(2):137-144(2006). XX RN [2] RP 1-7988 RA James D., Varga A.; RT ; RL Submitted (22-JUN-2005) to the INSDC. RL Cfia, 8801 East Saanich Road, Sidney, BC V8L 1H3, Canada XX DR MD5; 05c17baeb67929430e1a68fbd85fbaf8. XX FH Key Location/Qualifiers FH FT source 1..7988 FT /organism="Peach mosaic virus" FT /host="peach (Prunus persica)" FT /strain="2022-01 (CA-1)" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:183585" FT CDS 158..5818 FT /codon_start=1 FT /product="putative polyprotein" FT /note="contains methyltransferase, helicase, and FT RNA-dependent RNA polymerase domains; replicase region of FT genome" FT /db_xref="GOA:Q1PSK2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008744" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR027450" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q1PSK2" FT /protein_id="ABA18636.1" FT /translation="MAFSYRTPQEELLNRLPQTQQEIIGNLQFERLQKEEERRVVSFSY FT ALPDKTKEWFTKAGVYLSPFSFEVHSHPGCKTLENHILYNIVAPHISKYPYIACLSIKA FT NKMSKMERMGPHSVKNYDIINRLVTSRDKSRYGDLTEPSRVGGPKSTNYFIHDEIHYWT FT RKQLETFLELKSPKNLWVTMVFPPEILKGYKNSVLPFLYKFEIEGDNMVFMPDGVRSES FT YTQPIENGYLLSTNCISFTDSNKRKRQYSVTLVYTLGSHHVFHIFPKLGTMEDEVRRFG FT PYDLFDVGVLFKQPVRVPIQDFPLSTFKKIFIYLSSLKKPDEQSAVAKLRQLCDNEISF FT EAVALIQEFARRVEKGGIQSWGCSFFDYLKDFFFDKIPFKGTLEKIGLADDFTRRLINL FT EPLSFDIRADQERKLIAMVFDAVWPDQLSEDYLAAEISKGKKRVINGNAFVNGVSSTKK FT LFAWEEKGGCSRITYQKSFQSDDLAHTPLRISQNLDYSSRCTKNPCYFPEMARTDYVPL FT PPSYGAPLCIGFEGFYGNIPKTDYQLKKEKERKDVSMMVLEHHVKKKNMRNVDEYLASQ FT VRVDKQNKINMGRLSANSGKEKRQGYAVIVNGEWVPTKNPNIVPVLKGAAEKGKAQTEE FT VLTRTDFIESILEKAKLDNRGKSPEDAEMTDVHKYILEPICDHLIQKCNEKMDGEVLNA FT LLSLGGRELNGRRAMYVCLDSAMVYFHNTISYPSIEAHGKIKDWILRKAKDYDVPFNAA FT LVQVYRKDYTMGMHKDNEACYGEEPILTVNAFGSAVFSTDCCNNVINLEDGDELLMPAK FT FQRKFRHGVKSLSEGRVSITLRVHSRDFSFEEKRKFVNGKFDCLFDAVSKLISKKSEEV FT MIRNPHILDRCIMNRGCDLDDLRSICNNYEIKVECQGDCGLLEVGSIGMPLGRFMLRGN FT HFSLCSKRRSNLDSLANSVKDVSVSSCGIDYVQMKFLDRLRAIEPDLNSTKVKVDIRRG FT GKLLKCLMEGLTGIVSHNSTHDGWRLLKGVKNSADMRSLVSAMRGSSAGIEKNKLMEEL FT EELNFQQVSIHGIFGFAGSGKSHAIQDLISKEFRGSQGLMVVCPRKFLAKDWSEKGVDD FT QDIKTFESALKSDLKGKRVFILDEVTLLPRGFTDLLMMKIHMEGNLKKSTIVCLGDPLQ FT ASYFSQKDESYLEREPEVKRLFPEGVEYKWFSYRINRFVARQLSITTRNEFPGIDNQSQ FT VYGDVPSAIHSIQKSGVKVEVILVASMIEKELYCNLCQTMTFGESQGLTFGVGIIVLSE FT EAKLCSDAHIMVAVTRFNRGFSYALGSKGTKEEYMRGIKNGLLSRLCSSIGASKDFILS FT SSPIPLNFSEKMIQKGAGLDEMDREERLSGDPWLKTQIFLGKRFHLREPLGQVCQIEDS FT AIKCHVPLSNQQTLYVELSRMKAREDREFKGRDGWSNQFREEAGPNWKFPYKVAQPMNF FT EAIYPRHRMDDDITFYAAIKKRLRFDSVANNYTKFKQSQSRGQYLLQVFLKHVDLKPSR FT NQALLNQCKQEFEETKLSKSAATIGAHAQRSDPDWPLDRIFLFMKSQLCTKFEKRFEDA FT KAGQTLACFQHKILVEFSPWCRYVEKILTSCLPENFYIHQRKNFSELEAFAKRYSDGSV FT CVESDYTAFDVSQDHTILAFEVELLRYIGWDEAVLNSYIKMKCTLGCRLGGFAIMRFTG FT EFSTFLFNTLANMAFTFCRYEVKKGTPICFAGDDMCALRNLREIASHEHILNKLSLKAK FT VNRTNVPMFCGWRLCQDGLIKEPCLIYERLNVAIENGRLLDVIDSYYLEFSFAYKLGER FT LFQYLEIEQLNYHQVLTRFFVKNSHLLRGGARKSVFQNSVGFHEDGSDDEGSQIKNRRR FT GYSNFWSEKLQN" FT CDS 5736..7004 FT /codon_start=1 FT /product="putative virus movement protein" FT /note="ORF2; cell to cell movement of virus" FT /db_xref="GOA:Q1PSK1" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q1PSK1" FT /protein_id="ABA18637.1" FT /translation="MALMMRAHKSKIAEGDIPISGVKSSKINSDVTPFKRASDLMIHWS FT EFVFKIMPDDIGEGGFRLMSVPVVPRSEVDAVRRERGSANYAHWGALSISIDALFKKQS FT GVTGRCVVFDKRWNNCKQAVLQTFEFSLDSGSATMITSPNFSVSLDDPNINDSLCVVVV FT FNDLNFKKESYPVSVRVGHMCRFFDSFLSSEAFKNESNVYLESSGADLLSYKAFGFGED FT EEVERLFSFAEVVPTEAINMNVRELPGTMGNLFRKKKVKQFGFGSASDPRRRKGKRSAG FT VRLPAINCEREREFGQSGENIKSAGANGLREEVRGKPRDPFCKSEIRENVGKIEPSDED FT TDRFDQLSVSSKSSFEQPVRTRKEIDTEVNFRKHCNPRDIGLNGVYFNHCGGKEFNGSG FT SASFVQSEDDCWVDQTFRVNKRG" FT CDS 6724..7305 FT /codon_start=1 FT /product="putative coat protein" FT /db_xref="GOA:Q1PSK0" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q1PSK0" FT /protein_id="ABA18638.1" FT /translation="MSARLNLQMRIQTDLISFLSQANRPLNSRSEPEKKLILRSIFANI FT AIQGTSDSTEFISTTVEVRSSTGQEVLVSYNLRTIVGLIKLFGSTSEDENVNTRTFRQI FT CECFAEYAKNGLLALKLLREYTNLYKKAPSLGGKYPELCFDFNSGLDMLEMNNEQRKVI FT TNFNQRLIQTEIAKSEAEANTSAVSTNLCV" FT CDS 7451..7864 FT /codon_start=1 FT /product="putative nucleic acid-binding protein" FT /note="contains nucleic acid-binding (NB) protein motif, FT arginine-rich motif, and zinc finger motif" FT /db_xref="GOA:Q1PSJ9" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/TrEMBL:Q1PSJ9" FT /protein_id="ABA18639.1" FT /translation="MTTFDPKRNKDDRRIFSFCLSMMRKGIPSGLLCKLNLLAREVLAV FT DSNKTRLKLCGRSSFAKRRRADSLAVCSFCYRINCVGDYKCMRARFGAGERIERGKWIR FT HGMSSSLVENETPVCAPLLKMHILSEFERVKSS" XX SQ Sequence 7988 BP; 2439 A; 1392 C; 1908 G; 2249 T; 0 other; atactgacag gtatacactc aagtcgtgag tgagcagata gacgtaacgc acctatcgtg 60 gtctaggacc atccagttaa gtctggaatc aaagaaaaga aaatacatga tcatctgagc 120 tagcattttc atttaaaact actttgtaga cattactatg gctttctcat acagaacgcc 180 acaggaagag ctcttgaaca ggttacctca aacccaacaa gagataattg gcaaccttca 240 atttgagagg ttgcaaaaag aggaagagag acgagtggtt agtttctctt atgctctacc 300 agataaaact aaggagtggt tcactaaagc aggggtttat ctttcaccct tttcttttga 360 agtgcattca catcctggtt gcaaaactct ggaaaaccac attttatata atatagttgc 420 tccccatata tccaaatacc catacattgc atgtctcagc ataaaggcaa ataaaatgag 480 caagatggaa agaatgggtc ctcatagtgt caaaaactat gatataatca atcggcttgt 540 gacttcaaga gacaagtcaa gatatggcga tttaactgag ccatcaagag ttggtggtcc 600 aaaaagcaca aattatttca tccatgatga aattcattac tggacaagga aacaacttga 660 aacttttttg gaactcaagt ccccaaagaa tttgtgggtg accatggtat tccctcctga 720 gatactaaag ggatacaaaa attctgtact tccctttttg tacaagtttg aaattgaagg 780 ggacaacatg gtttttatgc cagatggggt cagatctgag agttacacac aacccattga 840 aaatggctat ctgttgagca caaactgcat cagtttcaca gacagcaaca agaggaagag 900 gcaatatagt gtcacactgg tttacaccct aggttcccat catgtgtttc acatattccc 960 aaagttaggt actatggagg atgaagtgag acgctttggt ccctatgacc tttttgatgt 1020 gggcgtttta ttcaaacaac cagtcagggt tccaattcag gattttcctc taagcacatt 1080 caagaagata ttcatttacc tgagctcatt gaaaaagccc gatgagcaat ccgcagtagc 1140 taagctacga caactctgtg acaacgaaat ttcgtttgaa gccgttgccc ttatacaaga 1200 gtttgccaga agagtagaga aaggtggaat tcagagttgg ggttgctctt tctttgatta 1260 cttaaaggat ttcttttttg acaagattcc ttttaagggc actttggaga aaattggttt 1320 agctgatgat ttcactagga gattgatcaa tcttgaacct ctatcctttg acataagagc 1380 cgatcaggaa cggaagctta ttgctatggt gttcgatgca gtttggcctg atcagctaag 1440 tgaagactat cttgctgcag aaatctctaa aggaaagaag agggtgatca atggcaacgc 1500 atttgtgaat ggagtatcaa gcacaaaaaa actttttgct tgggaggaaa agggaggttg 1560 cagccggatt acctaccaga agagtttcca gtctgatgat cttgcccaca cccctcttcg 1620 catatctcaa aatttggact acagttcacg ctgcaccaag aacccctgct attttccaga 1680 aatggcaaga actgactatg tgcctctgcc tccttcatat ggtgccccac tttgcatagg 1740 ctttgaaggg ttttatggga acattccaaa gactgattac cagcttaaaa aagaaaagga 1800 aagaaaggat gtttccatga tggtcctgga acatcatgtc aagaagaaaa acatgaggaa 1860 tgtggatgag tatctcgcct ctcaagtaag agttgacaaa caaaacaaga tcaatatggg 1920 gaggttatct gctaactcag gaaaggaaaa gaggcagggg tatgctgtca tcgtcaatgg 1980 agagtgggta cctaccaaga accctaacat tgtcccagtt ttgaaaggag cagcagaaaa 2040 aggaaaggcc caaactgagg aggtcttgac taggacagat tttattgaat ccattcttga 2100 gaaggctaaa ttggataaca gaggaaagag tccagaagat gcagagatga cagatgttca 2160 caaatacatc cttgaaccca tctgtgatca tttaatccaa aagtgcaatg aaaagatgga 2220 tggggaggtt ttgaatgcat tactcagcct cggaggcaga gagttgaatg gaaggagggc 2280 tatgtatgtt tgcctggatt ctgcaatggt ttacttccat aatacaattt cttacccctc 2340 aattgaggct catggaaaaa tcaaggattg gatcttgaga aaggcaaagg attatgatgt 2400 gcctttcaat gctgcccttg ttcaggttta cagaaaggat tacacaatgg gcatgcataa 2460 agacaatgaa gcatgttatg gagaagaacc tattctaact gttaatgctt ttggttcagc 2520 tgttttctcc actgactgct gcaacaatgt catcaatctg gaggatggag atgaacttct 2580 gatgcctgca aaattccaaa gaaaattcag acatggagtc aagtcattat cagaagggag 2640 agtcagcatc acattgcggg tgcatagcag ggacttctcc tttgaggaaa agagaaaatt 2700 tgtaaatgga aagtttgact gtctttttga tgctgtttct aagctcattt caaaaaagag 2760 tgaagaggtt atgatcagaa atccacacat tttagataga tgcataatga acagaggttg 2820 tgaccttgat gatctcagat ccatctgcaa caactatgag ataaaagttg agtgtcaagg 2880 agattgtggc ctgcttgagg taggtagcat tggaatgcct cttggaagat tcatgcttag 2940 aggaaatcac ttcagtttat gttcaaaaag gagatctaat ttggattccc ttgccaactc 3000 agtcaaggac gtttctgtgt cctcctgtgg aattgattac gttcagatga aatttctgga 3060 tagactgaga gcaattgagc ctgatttgaa ctcaacaaaa gttaaagtgg acatcaggag 3120 gggaggcaag ctactcaaat gcttaatgga aggacttaca gggatagttt ctcacaactc 3180 aacccatgat ggatggagat tactcaaagg tgtgaagaat tcagctgaca tgagatcttt 3240 ggtcagtgca atgagaggtt caagtgcagg aattgagaag aacaaactga tggaggagct 3300 ggaagagtta aatttccaac aggtcagcat ccatggaatt ttcgggttcg caggatctgg 3360 gaaaagtcat gccattcaag accttatatc gaaagaattc aggggttcac agggtctcat 3420 ggttgtctgc ccaaggaaat ttttggcgaa ggattggagt gagaaaggag tggatgatca 3480 agatatcaag acttttgaaa gtgcattaaa gtctgatttg aaagggaaga gggtttttat 3540 tcttgacgaa gtaactttgc tgcccagggg cttcactgac ttattgatga tgaagattca 3600 catggagggc aacttaaaaa aatccaccat agtttgtctt ggggatcctc tccaagcaag 3660 ttatttcagt cagaaagatg aatcatatct tgagagggaa cctgaggtca aaaggctttt 3720 tcctgaaggg gtcgaataca aatggttcag ttacagaatc aaccgatttg ttgccaggca 3780 attatccatc acaacaagga atgagtttcc cgggattgac aatcaaagcc aggtttatgg 3840 tgatgtacca agtgcaattc actcaatcca gaaatcagga gtgaaggttg aagttatctt 3900 ggtggccagc atgatagaaa aggagcttta ctgcaatttg tgtcaaacaa tgacatttgg 3960 agaatcgcaa ggattgacat ttggagttgg catcattgtg ctatcagagg aagccaaact 4020 ttgttcagat gctcatataa tggttgctgt cactcgattc aacagaggct tttcctatgc 4080 tcttggaagt aaagggacaa aagaagaata catgagggga ataaaaaatg gtttgttgag 4140 tagattgtgc tcttcaattg gagcaagcaa agatttcatt ctgagctcct ctccaattcc 4200 attgaacttt agtgagaaga tgattcagaa aggtgctggt ctggatgaaa tggacagaga 4260 ggaaagactc agtggtgacc catggctcaa aacccaaatt ttccttggaa agaggtttca 4320 tttgagagaa ccacttggtc aagtttgtca aattgaggat tcggctatca agtgtcatgt 4380 tcctcttagt aaccagcaaa ctctttatgt cgaactttcc agaatgaagg cgagagagga 4440 tagagaattt aagggcagag atggctggtc aaatcaattc agagaagagg ccggtccaaa 4500 ttggaaattt ccttacaagg tagcccagcc gatgaacttt gaggccatct atccaaggca 4560 caggatggac gatgacatca ccttttacgc tgcaatcaag aaaaggttaa ggttcgatag 4620 tgtggcaaac aattatacca aattcaagca gtctcaatct agagggcaat accttcttca 4680 ggtgtttttg aaacatgtcg acctgaaacc aagcagaaat caagcgttgc tcaatcaatg 4740 caaacaggaa tttgaagaga ctaagctttc aaagagtgca gccacaattg gagctcatgc 4800 acaaagatct gaccccgact ggccactgga tagaatcttc ctgtttatga agtcacaact 4860 ctgcaccaag ttcgagaaga ggtttgaaga tgcgaaggct ggacagacat tagcatgctt 4920 ccagcataaa attttggttg aatttagtcc atggtgcaga tatgttgaaa agatacttac 4980 ctcatgtctt cctgagaact tttatattca tcagaggaag aacttttctg agctggaggc 5040 gtttgcaaag agatattcgg atggctctgt ttgtgtggag tcagattaca ctgcttttga 5100 tgtatcccaa gatcatacga ttttggcttt tgaagttgaa cttctcaggt acattggatg 5160 ggatgaggct gttctgaaca gttacatcaa gatgaagtgc accttgggtt gcagattggg 5220 tggttttgca atcatgagat ttacagggga attttccaca tttcttttta atacattggc 5280 aaacatggct ttcaccttct gcagatacga agtaaaaaaa ggaacaccta tttgctttgc 5340 tggagatgac atgtgtgctt tgagaaattt gcgagaaatc gcatcccatg agcacatact 5400 gaacaaatta agcttgaagg ccaaggtgaa tagaacaaac gttccaatgt tttgcggctg 5460 gagactttgt caagatggtc ttatcaaaga gccgtgcctg atctatgaaa ggttgaatgt 5520 tgcaattgaa aatggtcgtt tgcttgatgt aatagactca tattacttgg aattttcgtt 5580 tgcctacaaa ttaggtgagc ggctgtttca gtatcttgaa attgaacaac tgaattatca 5640 tcaagttttg actagattct ttgtgaagaa cagccatttg ttgaggggtg gggcaagaaa 5700 aagcgttttt cagaactctg ttggctttca cgaggatggc tctgatgatg agggctcaca 5760 aatcaaaaat cgcagaaggg gatattccaa tttctggagt gaaaagctcc aaaattaatt 5820 ctgatgttac ccctttcaag agagcctccg acctgatgat ccattggagt gagtttgtct 5880 ttaaaataat gccagatgac attggagaag gcggctttag actcatgtct gttccggttg 5940 ttccaaggtc tgaggtcgat gcagtcagga gagagagggg ctctgcaaat tacgcacact 6000 ggggtgcttt gtctatttcc attgatgccc ttttcaagaa gcagtcgggg gtcactggtc 6060 gctgtgttgt ttttgacaag agatggaata actgcaaaca agctgtcctt caaacatttg 6120 aatttagcct tgattcaggg tctgccacaa tgattacatc tccaaatttc tctgtgtcac 6180 ttgatgatcc aaatatcaat gattctctct gtgtggttgt tgtcttcaat gacttgaatt 6240 tcaagaagga gagttatcca gttagtgttc gagttggtca catgtgcaga ttctttgaca 6300 gttttctgag ttctgaggca ttcaagaatg agtcaaatgt gtatttagag tcaagtggcg 6360 ctgatctctt gtcctacaag gcttttggct ttggagaaga tgaagaggtt gagagacttt 6420 tcagttttgc tgaggttgtt cccactgaag ctataaatat gaacgttaga gagctacctg 6480 gaactatggg caatttgttc agaaagaaaa aggtcaagca atttggattt ggttcagcaa 6540 gtgatccgag aagaagaaaa ggaaaaagat ctgctggagt taggttacca gccattaatt 6600 gtgaacgaga gagagaattt ggacagtctg gagagaatat taaatcagca ggagctaacg 6660 gcttacgtga ggaagtacgt gggaagccca gggacccttt ttgcaagagt gagatcagag 6720 agaatgtcgg caagattgaa ccttcagatg aggatacaga cagatttgat cagctttctg 6780 tctcaagcaa atcgtccttt gaacagccgg tcagaaccag aaaagaaatt gatactgagg 6840 tcaattttcg caaacattgc aatccaaggg acatcggact caacggagtt tatttcaacc 6900 actgtggagg taaggagttc aacgggtcag gaagtgctag tttcgtacaa tctgaggacg 6960 attgttgggt tgatcaaact tttcgggtca acaagcgagg atgaaaatgt gaacacaagg 7020 acattcagac agatttgcga gtgctttgct gagtacgcaa agaatggtct tttggcgctc 7080 aaattgttga gggagtacac aaatctgtat aagaaagccc caagtcttgg aggtaaatat 7140 cctgaactct gctttgactt caattctggc cttgatatgc ttgagatgaa taatgaacag 7200 aggaaagtca taaccaattt taatcagcgt cttatacaaa ctgaaattgc aaaaagtgaa 7260 gccgaagcga atacgtctgc tgtgtccacg aatttgtgtg tttagatttg cgcgtttaag 7320 tttacgtcgt gtgtagttga atagtattat gataagggtg aagttgtttg gttatgctct 7380 ttacggcgct ttggatttcg tagatttgct acttttggct ggtttgacgt tggtttgtac 7440 gatatcatag atgactactt ttgatcccaa aaggaacaaa gatgacagaa ggattttctc 7500 tttctgtctt tcaatgatga ggaagggtat tccatctggg ttgttgtgca agcttaatct 7560 gctagctagg gaggttttag ctgtggattc aaataaaaca cgtttgaagt tgtgtggtag 7620 aagttccttt gcaaaaagga gaagggctga tagtttagct gtctgctctt tttgttatag 7680 aataaattgt gttggtgatt acaaatgcat gcgagcgaga tttggcgcag gtgagcggat 7740 tgaaagaggg aaatggataa gacacgggat gagtagttct ttggtcgaga acgagactcc 7800 ggtctgtgct cctttactca agatgcacat cctgagcgaa tttgagagag tgaaaagctc 7860 ttagtctagc ggatctgact ttaaaagacg caccttcata caaggtttgt atggtttcct 7920 ggaactaacc agtgggagtg ctttaactta aataaatgta gcctgtagac ttttaaaaat 7980 tttactgc 7988 //